EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028028 (Gene tree)
Gene ID: 101164732
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 316
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 19771 bases
Position: chr11:4626503-4646273
Accession: 101164732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001756	zf-C2H2	PF00096.26	5e-26	1	4
ENSORLP00000001756	zf-C2H2	PF00096.26	5e-26	2	4
ENSORLP00000001756	zf-C2H2	PF00096.26	5e-26	3	4
ENSORLP00000001756	zf-C2H2	PF00096.26	5e-26	4	4
ENSORLP00000030377	zf-C2H2	PF00096.26	5.3e-14	1	3
ENSORLP00000030377	zf-C2H2	PF00096.26	5.3e-14	2	3
ENSORLP00000030377	zf-C2H2	PF00096.26	5.3e-14	3	3
ENSORLP00000030377	zf-met	PF12874.7	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000035269	-	4891	XM_020706954	ENSORLP00000030377	471 (aa)	XP_020562613	UPI0002A49630
ENSORLT00000001757	-	948	-	ENSORLP00000001756	315 (aa)	-	H2L7E4

Gene Model

Click here to download ENSORLG00000028028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028028	-	85	35.662	ENSORLG00000013863	-	94	35.662
ENSORLG00000028028	-	83	39.706	ENSORLG00000002307	-	96	36.777
ENSORLG00000028028	-	75	36.946	ENSORLG00000022677	-	64	36.946
ENSORLG00000028028	-	79	48.000	ENSORLG00000023806	-	94	48.000
ENSORLG00000028028	-	73	41.611	ENSORLG00000026520	-	84	34.632
ENSORLG00000028028	-	78	34.615	ENSORLG00000029440	-	82	33.673
ENSORLG00000028028	-	74	44.030	ENSORLG00000023744	-	76	41.497
ENSORLG00000028028	-	75	36.306	ENSORLG00000000076	ZNF319	86	36.306
ENSORLG00000028028	-	91	32.751	ENSORLG00000001615	-	72	32.751
ENSORLG00000028028	-	95	36.052	ENSORLG00000002268	-	94	36.052
ENSORLG00000028028	-	85	37.113	ENSORLG00000029027	-	87	41.600
ENSORLG00000028028	-	72	48.624	ENSORLG00000010117	-	74	48.624
ENSORLG00000028028	-	78	43.820	ENSORLG00000025719	-	88	30.986
ENSORLG00000028028	-	80	32.456	ENSORLG00000029270	-	73	33.333
ENSORLG00000028028	-	76	43.750	ENSORLG00000007032	-	90	43.750
ENSORLG00000028028	-	69	36.134	ENSORLG00000001796	-	87	35.065
ENSORLG00000028028	-	76	37.821	ENSORLG00000006888	znf384l	51	37.821
ENSORLG00000028028	-	79	46.875	ENSORLG00000000191	-	97	46.875
ENSORLG00000028028	-	82	41.139	ENSORLG00000027767	-	77	41.139
ENSORLG00000028028	-	76	42.647	ENSORLG00000027765	-	84	42.647
ENSORLG00000028028	-	70	47.525	ENSORLG00000001749	-	92	47.525
ENSORLG00000028028	-	76	41.489	ENSORLG00000012610	znf710b	51	41.489
ENSORLG00000028028	-	75	45.968	ENSORLG00000023094	-	54	45.968
ENSORLG00000028028	-	90	35.749	ENSORLG00000025576	-	91	35.749
ENSORLG00000028028	-	60	32.653	ENSORLG00000009246	-	68	30.968
ENSORLG00000028028	-	73	38.860	ENSORLG00000025200	-	90	33.333
ENSORLG00000028028	-	72	35.945	ENSORLG00000000262	-	93	30.303
ENSORLG00000028028	-	80	34.109	ENSORLG00000009152	zbtb41	64	30.588
ENSORLG00000028028	-	73	32.500	ENSORLG00000028711	-	88	33.766
ENSORLG00000028028	-	69	43.066	ENSORLG00000029814	-	77	43.066
ENSORLG00000028028	-	82	37.580	ENSORLG00000023809	-	70	37.580
ENSORLG00000028028	-	70	46.429	ENSORLG00000025621	-	91	46.429
ENSORLG00000028028	-	86	40.187	ENSORLG00000024255	si:dkey-89b17.4	53	30.435
ENSORLG00000028028	-	77	30.045	ENSORLG00000012533	PRDM15	50	30.872
ENSORLG00000028028	-	84	35.211	ENSORLG00000000956	znf341	51	35.211
ENSORLG00000028028	-	77	47.059	ENSORLG00000023828	-	76	32.000
ENSORLG00000028028	-	82	30.682	ENSORLG00000016247	prdm5	73	30.682
ENSORLG00000028028	-	75	42.391	ENSORLG00000016243	-	74	40.909
ENSORLG00000028028	-	85	44.211	ENSORLG00000027982	-	98	48.077
ENSORLG00000028028	-	70	49.153	ENSORLG00000022350	-	67	49.153
ENSORLG00000028028	-	72	41.718	ENSORLG00000021885	-	62	42.157
ENSORLG00000028028	-	76	48.235	ENSORLG00000007009	-	91	40.000
ENSORLG00000028028	-	69	39.459	ENSORLG00000023086	-	73	39.437
ENSORLG00000028028	-	59	34.959	ENSORLG00000025651	scrt1b	50	35.714
ENSORLG00000028028	-	76	42.969	ENSORLG00000025080	-	94	40.690
ENSORLG00000028028	-	69	39.877	ENSORLG00000026811	-	77	39.877
ENSORLG00000028028	-	79	39.024	ENSORLG00000016981	-	92	39.024
ENSORLG00000028028	-	77	40.127	ENSORLG00000021951	-	57	40.127
ENSORLG00000028028	-	81	36.842	ENSORLG00000028851	-	70	38.298
ENSORLG00000028028	-	78	39.189	ENSORLG00000025380	-	66	38.095
ENSORLG00000028028	-	69	34.579	ENSORLG00000000557	-	96	30.769
ENSORLG00000028028	-	88	41.975	ENSORLG00000007097	-	98	41.975
ENSORLG00000028028	-	80	46.078	ENSORLG00000029343	-	82	41.333
ENSORLG00000028028	-	80	33.484	ENSORLG00000027418	-	65	33.484
ENSORLG00000028028	-	69	44.828	ENSORLG00000027271	-	85	44.828
ENSORLG00000028028	-	73	35.644	ENSORLG00000026568	-	54	35.644
ENSORLG00000028028	-	67	35.897	ENSORLG00000000197	-	85	35.897
ENSORLG00000028028	-	70	45.545	ENSORLG00000025702	-	66	44.340
ENSORLG00000028028	-	78	41.304	ENSORLG00000007885	znf646	71	31.250
ENSORLG00000028028	-	82	36.111	ENSORLG00000027303	-	58	36.111
ENSORLG00000028028	-	72	32.331	ENSORLG00000024789	-	71	35.498
ENSORLG00000028028	-	90	33.466	ENSORLG00000024652	-	91	40.625
ENSORLG00000028028	-	85	43.396	ENSORLG00000022187	-	64	45.033
ENSORLG00000028028	-	79	42.500	ENSORLG00000027009	-	81	42.500
ENSORLG00000028028	-	85	44.262	ENSORLG00000013344	znf574	61	44.262
ENSORLG00000028028	-	72	36.486	ENSORLG00000012434	znf1064	54	36.052
ENSORLG00000028028	-	81	33.544	ENSORLG00000028381	-	91	37.647
ENSORLG00000028028	-	72	37.342	ENSORLG00000023497	-	61	37.342
ENSORLG00000028028	-	73	35.426	ENSORLG00000006966	-	93	44.615
ENSORLG00000028028	-	92	37.857	ENSORLG00000022699	-	90	37.857
ENSORLG00000028028	-	59	37.719	ENSORLG00000017475	snai2	56	32.653
ENSORLG00000028028	-	72	44.444	ENSORLG00000028456	-	78	37.888
ENSORLG00000028028	-	69	46.825	ENSORLG00000029172	-	70	46.825
ENSORLG00000028028	-	72	41.905	ENSORLG00000030630	-	96	30.653
ENSORLG00000028028	-	70	48.780	ENSORLG00000030610	-	57	48.780
ENSORLG00000028028	-	79	43.750	ENSORLG00000028323	-	98	34.222
ENSORLG00000028028	-	86	39.189	ENSORLG00000024174	-	97	33.168
ENSORLG00000028028	-	82	36.816	ENSORLG00000022704	-	64	36.816
ENSORLG00000028028	-	79	49.624	ENSORLG00000028091	-	83	49.624
ENSORLG00000028028	-	71	44.898	ENSORLG00000000253	-	97	44.898
ENSORLG00000028028	-	70	47.183	ENSORLG00000029994	-	79	47.183
ENSORLG00000028028	-	76	38.321	ENSORLG00000024896	-	72	46.552
ENSORLG00000028028	-	73	37.768	ENSORLG00000028567	-	83	37.768
ENSORLG00000028028	-	72	43.411	ENSORLG00000025717	-	87	43.411
ENSORLG00000028028	-	83	35.652	ENSORLG00000026432	-	72	31.285
ENSORLG00000028028	-	80	41.912	ENSORLG00000005060	GFI1	51	30.876
ENSORLG00000028028	-	73	42.623	ENSORLG00000000247	-	88	33.526
ENSORLG00000028028	-	76	43.434	ENSORLG00000027822	-	89	38.614
ENSORLG00000028028	-	70	41.221	ENSORLG00000026191	-	99	41.221
ENSORLG00000028028	-	80	36.250	ENSORLG00000028433	-	94	35.981
ENSORLG00000028028	-	84	44.762	ENSORLG00000028168	-	85	44.762
ENSORLG00000028028	-	89	34.884	ENSORLG00000024399	-	90	34.884
ENSORLG00000028028	-	72	45.238	ENSORLG00000027186	-	85	45.238
ENSORLG00000028028	-	74	38.824	ENSORLG00000027974	-	68	30.000
ENSORLG00000028028	-	50	47.312	ENSORLG00000028457	-	85	48.000
ENSORLG00000028028	-	84	34.583	ENSORLG00000023133	-	81	34.583
ENSORLG00000028028	-	77	48.696	ENSORLG00000022502	-	90	48.696
ENSORLG00000028028	-	73	31.746	ENSORLG00000012472	znf319b	84	31.746
ENSORLG00000028028	-	71	47.619	ENSORLG00000024183	-	72	47.619
ENSORLG00000028028	-	71	32.227	ENSORLG00000019331	zbtb48	50	37.662
ENSORLG00000028028	-	79	37.281	ENSORLG00000030655	-	90	39.362
ENSORLG00000028028	-	92	37.234	ENSORLG00000012485	-	68	37.234
ENSORLG00000028028	-	72	47.414	ENSORLG00000000420	-	87	47.414
ENSORLG00000028028	-	69	37.264	ENSORLG00000029896	-	90	32.184
ENSORLG00000028028	-	83	38.667	ENSORLG00000007263	-	77	42.236
ENSORLG00000028028	-	70	46.309	ENSORLG00000026852	-	89	30.928
ENSORLG00000028028	-	69	37.186	ENSORLG00000027575	-	77	37.186
ENSORLG00000028028	-	76	40.278	ENSORLG00000027967	-	85	40.278
ENSORLG00000028028	-	79	37.597	ENSORLG00000011040	-	96	32.751
ENSORLG00000028028	-	69	42.331	ENSORLG00000026684	-	74	34.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028028	-	83	36.458	ENSACIG00000007855	-	88	42.424	Amphilophus_citrinellus
ENSORLG00000028028	-	100	98.089	ENSORLG00020010923	-	100	98.089	Oryzias_latipes_hni
ENSORLG00000028028	-	100	97.877	ENSORLG00015000499	-	100	97.877	Oryzias_latipes_hsok