EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028049 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4619 bases
Position: chr1:25742813-25747431
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000040161	RVT_1	PF00078.27	2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045654	-	4619	-	ENSORLP00000040161	1027 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028049	-	53	31.295	ENSORLG00000025192	-	99	31.295
ENSORLG00000028049	-	76	54.765	ENSORLG00000026858	-	93	54.765
ENSORLG00000028049	-	70	93.084	ENSORLG00000030053	-	99	93.084
ENSORLG00000028049	-	74	30.039	ENSORLG00000024888	-	99	30.039
ENSORLG00000028049	-	57	55.857	ENSORLG00000022703	-	94	55.857
ENSORLG00000028049	-	95	45.510	ENSORLG00000029564	-	95	45.510
ENSORLG00000028049	-	89	54.516	ENSORLG00000023570	-	93	54.516
ENSORLG00000028049	-	55	31.514	ENSORLG00000025964	-	86	31.514
ENSORLG00000028049	-	54	30.496	ENSORLG00000024294	-	98	30.052
ENSORLG00000028049	-	72	50.806	ENSORLG00000025095	-	99	50.806
ENSORLG00000028049	-	66	30.014	ENSORLG00000026699	-	89	30.014
ENSORLG00000028049	-	53	31.261	ENSORLG00000026102	-	98	31.261
ENSORLG00000028049	-	50	57.915	ENSORLG00000026969	-	97	57.915
ENSORLG00000028049	-	65	56.567	ENSORLG00000030445	-	98	56.567
ENSORLG00000028049	-	51	31.073	ENSORLG00000029959	-	87	31.073
ENSORLG00000028049	-	53	30.466	ENSORLG00000025054	-	97	30.880
ENSORLG00000028049	-	63	47.853	ENSORLG00000025570	-	99	47.853
ENSORLG00000028049	-	51	30.540	ENSORLG00000029453	-	95	30.540
ENSORLG00000028049	-	53	53.370	ENSORLG00000022075	-	99	53.370
ENSORLG00000028049	-	50	57.722	ENSORLG00000025899	-	97	57.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028049	-	50	59.454	ENSACLG00000023788	-	100	59.454	Astatotilapia_calliptera
ENSORLG00000028049	-	95	53.185	ENSACLG00000018778	-	97	53.589	Astatotilapia_calliptera
ENSORLG00000028049	-	66	56.515	ENSACLG00000021942	-	99	56.515	Astatotilapia_calliptera
ENSORLG00000028049	-	60	50.891	ENSACLG00000027577	-	100	50.891	Astatotilapia_calliptera
ENSORLG00000028049	-	54	57.374	ENSACLG00000016956	-	99	57.374	Astatotilapia_calliptera
ENSORLG00000028049	-	69	56.577	ENSACLG00000019498	-	99	56.577	Astatotilapia_calliptera
ENSORLG00000028049	-	58	53.716	ENSACLG00000017241	-	98	53.716	Astatotilapia_calliptera
ENSORLG00000028049	-	73	55.274	ENSACLG00000001773	-	99	55.274	Astatotilapia_calliptera
ENSORLG00000028049	-	71	30.904	ENSACLG00000009813	-	83	31.174	Astatotilapia_calliptera
ENSORLG00000028049	-	63	50.847	ENSACLG00000020849	-	99	50.847	Astatotilapia_calliptera
ENSORLG00000028049	-	99	53.891	ENSACLG00000007650	-	99	54.280	Astatotilapia_calliptera
ENSORLG00000028049	-	64	62.290	ENSACLG00000000579	-	99	62.290	Astatotilapia_calliptera
ENSORLG00000028049	-	80	50.852	ENSACLG00000003707	-	99	50.852	Astatotilapia_calliptera
ENSORLG00000028049	-	95	53.422	ENSACLG00000017200	-	95	53.422	Astatotilapia_calliptera
ENSORLG00000028049	-	57	55.102	ENSACLG00000020009	-	100	55.102	Astatotilapia_calliptera
ENSORLG00000028049	-	83	56.776	ENSACLG00000018002	-	100	56.776	Astatotilapia_calliptera
ENSORLG00000028049	-	84	59.165	ENSACLG00000013374	-	99	59.165	Astatotilapia_calliptera
ENSORLG00000028049	-	72	51.687	ENSACLG00000027127	-	99	51.687	Astatotilapia_calliptera
ENSORLG00000028049	-	55	30.412	ENSACLG00000016231	-	98	30.412	Astatotilapia_calliptera
ENSORLG00000028049	-	79	57.337	ENSACLG00000004427	-	99	57.337	Astatotilapia_calliptera
ENSORLG00000028049	-	88	50.887	ENSACLG00000008988	-	98	50.887	Astatotilapia_calliptera
ENSORLG00000028049	-	65	48.503	ENSKMAG00000004644	-	99	48.503	Kryptolebias_marmoratus
ENSORLG00000028049	-	64	56.753	ENSLBEG00000018374	-	99	56.753	Labrus_bergylta
ENSORLG00000028049	-	53	57.636	ENSLBEG00000008627	-	98	57.636	Labrus_bergylta
ENSORLG00000028049	-	70	56.293	ENSLBEG00000015802	-	99	56.293	Labrus_bergylta
ENSORLG00000028049	-	63	50.693	ENSMZEG00005026189	-	99	50.693	Maylandia_zebra
ENSORLG00000028049	-	75	53.896	ENSMALG00000007417	-	99	53.896	Monopterus_albus
ENSORLG00000028049	-	54	55.957	ENSMALG00000007425	-	98	55.957	Monopterus_albus
ENSORLG00000028049	-	68	54.494	ENSMALG00000020948	-	98	54.494	Monopterus_albus
ENSORLG00000028049	-	54	56.859	ENSMALG00000018226	-	98	56.859	Monopterus_albus
ENSORLG00000028049	-	54	56.137	ENSMALG00000008286	-	98	56.137	Monopterus_albus
ENSORLG00000028049	-	54	56.679	ENSMALG00000021030	-	98	56.679	Monopterus_albus
ENSORLG00000028049	-	66	49.192	ENSONIG00000021263	-	89	49.486	Oreochromis_niloticus
ENSORLG00000028049	-	50	52.500	ENSONIG00000020746	-	95	52.500	Oreochromis_niloticus
ENSORLG00000028049	-	50	57.722	ENSORLG00020019661	-	97	57.722	Oryzias_latipes_hni
ENSORLG00000028049	-	66	30.145	ENSORLG00020013338	-	82	30.145	Oryzias_latipes_hni
ENSORLG00000028049	-	96	47.284	ENSOMEG00000004858	-	98	47.222	Oryzias_melastigma
ENSORLG00000028049	-	53	57.091	ENSOMEG00000008180	-	99	57.091	Oryzias_melastigma
ENSORLG00000028049	-	52	36.842	ENSOMEG00000012000	-	97	36.842	Oryzias_melastigma
ENSORLG00000028049	-	96	47.384	ENSOMEG00000013089	-	98	47.321	Oryzias_melastigma
ENSORLG00000028049	-	54	56.679	ENSPNYG00000010168	-	98	56.679	Pundamilia_nyererei
ENSORLG00000028049	-	70	47.586	ENSXMAG00000029300	-	100	47.586	Xiphophorus_maculatus
ENSORLG00000028049	-	67	47.323	ENSXMAG00000024044	-	99	47.323	Xiphophorus_maculatus
ENSORLG00000028049	-	70	47.730	ENSXMAG00000026064	-	99	47.730	Xiphophorus_maculatus
ENSORLG00000028049	-	52	30.018	ENSXMAG00000020874	-	60	30.018	Xiphophorus_maculatus
ENSORLG00000028049	-	96	45.913	ENSXMAG00000023391	-	99	45.913	Xiphophorus_maculatus
ENSORLG00000028049	-	77	50.619	ENSXMAG00000023609	-	99	50.619	Xiphophorus_maculatus