EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000028267 (Gene tree)
Gene ID: 101157354
Gene Symbol: srp19
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3241 bases
Position: chr9:186726-189966
Accession: 101157354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000042963	SRP19	PF01922.17	3e-28	1	1
ENSORLP00000032340	SRP19	PF01922.17	3.6e-28	1	1
ENSORLP00000042146	SRP19	PF01922.17	3.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029326	-	1985	XM_004086436	ENSORLP00000042963	140 (aa)	XP_004086484	H2MZK4
ENSORLT00000029735	-	330	-	ENSORLP00000042146	109 (aa)	-	-
ENSORLT00000027641	-	2009	-	ENSORLP00000032340	148 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028267's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028267	srp19	92	67.692	ENSG00000153037	SRP19	95	65.657	Homo_sapiens
ENSORLG00000028267	srp19	95	88.722	ENSAPOG00000002199	srp19	94	88.722	Acanthochromis_polyacanthus
ENSORLG00000028267	srp19	91	69.767	ENSAMEG00000012623	SRP19	88	69.767	Ailuropoda_melanoleuca
ENSORLG00000028267	srp19	95	89.474	ENSACIG00000005082	srp19	94	89.474	Amphilophus_citrinellus
ENSORLG00000028267	srp19	95	87.970	ENSAOCG00000002718	srp19	94	87.970	Amphiprion_ocellaris
ENSORLG00000028267	srp19	95	87.218	ENSAPEG00000022170	srp19	94	87.218	Amphiprion_percula
ENSORLG00000028267	srp19	95	90.977	ENSATEG00000012472	srp19	94	90.977	Anabas_testudineus
ENSORLG00000028267	srp19	85	67.021	ENSAPLG00000002624	SRP19	93	67.826	Anas_platyrhynchos
ENSORLG00000028267	srp19	91	66.406	ENSACAG00000007550	SRP19	89	66.923	Anolis_carolinensis
ENSORLG00000028267	srp19	91	69.767	ENSANAG00000032576	-	90	69.767	Aotus_nancymaae
ENSORLG00000028267	srp19	91	52.713	ENSANAG00000030287	-	89	52.033	Aotus_nancymaae
ENSORLG00000028267	srp19	90	65.657	ENSANAG00000029862	-	91	65.657	Aotus_nancymaae
ENSORLG00000028267	srp19	95	85.714	ENSACLG00000006259	srp19	94	85.714	Astatotilapia_calliptera
ENSORLG00000028267	srp19	94	80.153	ENSAMXG00000043011	srp19	94	80.451	Astyanax_mexicanus
ENSORLG00000028267	srp19	91	68.217	ENSBTAG00000012803	SRP19	90	68.217	Bos_taurus
ENSORLG00000028267	srp19	83	46.610	WBGene00018159	F37F2.2	82	46.610	Caenorhabditis_elegans
ENSORLG00000028267	srp19	86	50.820	ENSCJAG00000045531	-	80	50.794	Callithrix_jacchus
ENSORLG00000028267	srp19	91	69.767	ENSCJAG00000038676	-	85	66.667	Callithrix_jacchus
ENSORLG00000028267	srp19	91	68.217	ENSCAFG00000031549	SRP19	90	68.217	Canis_familiaris
ENSORLG00000028267	srp19	85	69.167	ENSCAFG00020022437	-	91	71.074	Canis_lupus_dingo
ENSORLG00000028267	srp19	88	66.000	ENSCAFG00020004285	-	92	66.990	Canis_lupus_dingo
ENSORLG00000028267	srp19	91	68.217	ENSCAFG00020014267	-	90	68.217	Canis_lupus_dingo
ENSORLG00000028267	srp19	91	68.217	ENSCHIG00000017551	SRP19	90	68.217	Capra_hircus
ENSORLG00000028267	srp19	91	68.992	ENSTSYG00000007875	SRP19	90	68.992	Carlito_syrichta
ENSORLG00000028267	srp19	83	56.303	ENSCPOG00000036806	SRP19	89	56.303	Cavia_porcellus
ENSORLG00000028267	srp19	87	50.407	ENSCCAG00000029821	-	61	50.407	Cebus_capucinus
ENSORLG00000028267	srp19	87	52.419	ENSCCAG00000023426	-	80	52.419	Cebus_capucinus
ENSORLG00000028267	srp19	91	69.767	ENSCCAG00000035651	-	90	69.767	Cebus_capucinus
ENSORLG00000028267	srp19	91	62.791	ENSCATG00000039250	-	89	62.791	Cercocebus_atys
ENSORLG00000028267	srp19	87	58.537	ENSCATG00000040513	-	77	59.200	Cercocebus_atys
ENSORLG00000028267	srp19	91	70.543	ENSCLAG00000004791	-	90	70.543	Chinchilla_lanigera
ENSORLG00000028267	srp19	86	73.684	ENSCLAG00000016055	-	89	65.891	Chinchilla_lanigera
ENSORLG00000028267	srp19	91	68.992	ENSCHOG00000013452	SRP19	90	68.992	Choloepus_hoffmanni
ENSORLG00000028267	srp19	94	65.152	ENSCPBG00000013903	SRP19	94	65.672	Chrysemys_picta_bellii
ENSORLG00000028267	srp19	92	66.923	ENSCGRG00001020510	Srp19	90	67.442	Cricetulus_griseus_chok1gshd
ENSORLG00000028267	srp19	86	70.526	ENSCGRG00000008542	-	91	63.025	Cricetulus_griseus_crigri
ENSORLG00000028267	srp19	92	64.151	ENSCGRG00000010716	-	93	63.208	Cricetulus_griseus_crigri
ENSORLG00000028267	srp19	95	85.714	ENSCSEG00000010039	srp19	94	85.714	Cynoglossus_semilaevis
ENSORLG00000028267	srp19	95	89.474	ENSCVAG00000017621	srp19	94	89.474	Cyprinodon_variegatus
ENSORLG00000028267	srp19	94	78.626	ENSDARG00000035699	srp19	94	78.947	Danio_rerio
ENSORLG00000028267	srp19	91	68.992	ENSDNOG00000013856	SRP19	90	68.992	Dasypus_novemcinctus
ENSORLG00000028267	srp19	94	69.231	ENSDORG00000004746	Srp19	81	69.903	Dipodomys_ordii
ENSORLG00000028267	srp19	87	50.000	FBgn0015298	Srp19	73	49.580	Drosophila_melanogaster
ENSORLG00000028267	srp19	91	68.217	ENSETEG00000017132	SRP19	90	68.217	Echinops_telfairi
ENSORLG00000028267	srp19	89	68.548	ENSEBUG00000006613	srp19	94	66.917	Eptatretus_burgeri
ENSORLG00000028267	srp19	91	68.992	ENSEASG00005015182	SRP19	90	68.992	Equus_asinus_asinus
ENSORLG00000028267	srp19	91	68.217	ENSEEUG00000007298	SRP19	90	68.217	Erinaceus_europaeus
ENSORLG00000028267	srp19	95	75.940	ENSELUG00000004594	srp19	94	75.940	Esox_lucius
ENSORLG00000028267	srp19	94	84.733	ENSELUG00000007958	srp19	94	84.962	Esox_lucius
ENSORLG00000028267	srp19	91	68.992	ENSFCAG00000025895	SRP19	90	68.992	Felis_catus
ENSORLG00000028267	srp19	91	68.992	ENSFDAG00000013543	SRP19	90	68.992	Fukomys_damarensis
ENSORLG00000028267	srp19	95	87.970	ENSFHEG00000000493	srp19	94	87.970	Fundulus_heteroclitus
ENSORLG00000028267	srp19	87	84.211	ENSGMOG00000003264	srp19	94	83.333	Gadus_morhua
ENSORLG00000028267	srp19	89	68.254	ENSGALG00000000218	SRP19	92	66.917	Gallus_gallus
ENSORLG00000028267	srp19	87	90.526	ENSGAFG00000015815	srp19	68	80.851	Gambusia_affinis
ENSORLG00000028267	srp19	95	82.707	ENSGACG00000001093	srp19	90	82.707	Gasterosteus_aculeatus
ENSORLG00000028267	srp19	94	65.152	ENSGAGG00000025305	SRP19	94	65.672	Gopherus_agassizii
ENSORLG00000028267	srp19	91	81.395	ENSHBUG00000006131	srp19	90	81.395	Haplochromis_burtoni
ENSORLG00000028267	srp19	91	68.992	ENSHGLG00000006075	SRP19	90	68.992	Heterocephalus_glaber_female
ENSORLG00000028267	srp19	91	68.992	ENSHGLG00100015859	SRP19	90	68.992	Heterocephalus_glaber_male
ENSORLG00000028267	srp19	94	80.451	ENSHCOG00000013231	srp19	94	80.451	Hippocampus_comes
ENSORLG00000028267	srp19	94	79.389	ENSIPUG00000025084	srp19	94	79.699	Ictalurus_punctatus
ENSORLG00000028267	srp19	91	70.543	ENSSTOG00000000348	SRP19	90	70.543	Ictidomys_tridecemlineatus
ENSORLG00000028267	srp19	91	68.992	ENSJJAG00000017185	Srp19	90	68.992	Jaculus_jaculus
ENSORLG00000028267	srp19	95	91.729	ENSKMAG00000011155	srp19	94	91.729	Kryptolebias_marmoratus
ENSORLG00000028267	srp19	95	87.218	ENSLBEG00000026727	srp19	94	87.218	Labrus_bergylta
ENSORLG00000028267	srp19	94	70.455	ENSLACG00000004459	SRP19	87	70.896	Latimeria_chalumnae
ENSORLG00000028267	srp19	94	78.626	ENSLOCG00000010302	srp19	94	78.947	Lepisosteus_oculatus
ENSORLG00000028267	srp19	91	67.442	ENSLAFG00000002564	SRP19	90	67.442	Loxodonta_africana
ENSORLG00000028267	srp19	84	51.261	ENSMFAG00000040055	-	90	52.066	Macaca_fascicularis
ENSORLG00000028267	srp19	86	63.636	ENSMFAG00000000554	-	96	58.491	Macaca_fascicularis
ENSORLG00000028267	srp19	86	64.463	ENSMMUG00000049186	-	93	61.832	Macaca_mulatta
ENSORLG00000028267	srp19	87	57.724	ENSMMUG00000032515	-	92	58.400	Macaca_mulatta
ENSORLG00000028267	srp19	84	50.420	ENSMNEG00000040117	-	90	51.240	Macaca_nemestrina
ENSORLG00000028267	srp19	92	67.692	ENSMNEG00000038714	SRP19	90	68.217	Macaca_nemestrina
ENSORLG00000028267	srp19	95	90.977	ENSMAMG00000018346	srp19	94	90.977	Mastacembelus_armatus
ENSORLG00000028267	srp19	95	85.714	ENSMZEG00005001765	srp19	94	85.714	Maylandia_zebra
ENSORLG00000028267	srp19	85	67.500	ENSMGAG00000006762	SRP19	93	68.033	Meleagris_gallopavo
ENSORLG00000028267	srp19	90	61.616	ENSMICG00000049202	-	92	62.745	Microcebus_murinus
ENSORLG00000028267	srp19	92	66.154	ENSMICG00000000399	SRP19	90	66.667	Microcebus_murinus
ENSORLG00000028267	srp19	87	69.792	ENSMOCG00000010532	-	88	70.833	Microtus_ochrogaster
ENSORLG00000028267	srp19	92	68.462	ENSMOCG00000006534	Srp19	90	68.992	Microtus_ochrogaster
ENSORLG00000028267	srp19	89	86.400	ENSMMOG00000010417	srp19	81	86.400	Mola_mola
ENSORLG00000028267	srp19	94	68.939	ENSMODG00000013278	SRP19	94	69.403	Monodelphis_domestica
ENSORLG00000028267	srp19	95	90.977	ENSMALG00000003858	srp19	94	90.977	Monopterus_albus
ENSORLG00000028267	srp19	92	70.000	MGP_CAROLIEiJ_G0022086	Srp19	90	70.543	Mus_caroli
ENSORLG00000028267	srp19	92	70.000	ENSMUSG00000014504	Srp19	90	70.543	Mus_musculus
ENSORLG00000028267	srp19	92	69.231	MGP_PahariEiJ_G0018820	Srp19	90	69.767	Mus_pahari
ENSORLG00000028267	srp19	92	70.000	MGP_SPRETEiJ_G0022998	Srp19	90	70.543	Mus_spretus
ENSORLG00000028267	srp19	91	69.767	ENSMPUG00000012695	SRP19	88	69.767	Mustela_putorius_furo
ENSORLG00000028267	srp19	92	66.154	ENSMLUG00000014793	-	90	66.667	Myotis_lucifugus
ENSORLG00000028267	srp19	88	63.710	ENSMLUG00000024549	-	91	64.286	Myotis_lucifugus
ENSORLG00000028267	srp19	89	62.400	ENSNGAG00000014524	-	96	62.400	Nannospalax_galili
ENSORLG00000028267	srp19	92	66.923	ENSNGAG00000003440	-	90	67.442	Nannospalax_galili
ENSORLG00000028267	srp19	89	64.286	ENSNLEG00000035364	-	90	64.286	Nomascus_leucogenys
ENSORLG00000028267	srp19	85	70.213	ENSMEUG00000012529	SRP19	93	70.248	Notamacropus_eugenii
ENSORLG00000028267	srp19	83	71.739	ENSOPRG00000010549	SRP19	93	70.248	Ochotona_princeps
ENSORLG00000028267	srp19	83	66.304	ENSODEG00000013862	-	87	59.524	Octodon_degus
ENSORLG00000028267	srp19	93	70.192	ENSODEG00000005538	-	91	70.192	Octodon_degus
ENSORLG00000028267	srp19	89	65.873	ENSODEG00000019119	-	90	65.891	Octodon_degus
ENSORLG00000028267	srp19	95	87.218	ENSONIG00000000542	srp19	94	87.218	Oreochromis_niloticus
ENSORLG00000028267	srp19	94	67.424	ENSOANG00000011139	SRP19	77	67.910	Ornithorhynchus_anatinus
ENSORLG00000028267	srp19	91	68.462	ENSOCUG00000015639	SRP19	90	68.462	Oryctolagus_cuniculus
ENSORLG00000028267	srp19	100	99.286	ENSORLG00020015201	srp19	100	99.286	Oryzias_latipes_hni
ENSORLG00000028267	srp19	100	99.286	ENSORLG00015007525	srp19	100	99.286	Oryzias_latipes_hsok
ENSORLG00000028267	srp19	95	94.737	ENSOMEG00000009178	srp19	95	94.737	Oryzias_melastigma
ENSORLG00000028267	srp19	91	68.750	ENSOGAG00000008579	SRP19	89	68.750	Otolemur_garnettii
ENSORLG00000028267	srp19	92	66.923	ENSOARG00000016066	SRP19	90	67.442	Ovis_aries
ENSORLG00000028267	srp19	92	67.692	ENSPPAG00000037062	SRP19	90	68.217	Pan_paniscus
ENSORLG00000028267	srp19	91	68.992	ENSPPRG00000015591	SRP19	90	68.992	Panthera_pardus
ENSORLG00000028267	srp19	91	68.992	ENSPTIG00000021474	SRP19	90	68.992	Panthera_tigris_altaica
ENSORLG00000028267	srp19	92	67.692	ENSPTRG00000017136	SRP19	90	68.217	Pan_troglodytes
ENSORLG00000028267	srp19	92	61.538	ENSPANG00000034740	-	89	62.016	Papio_anubis
ENSORLG00000028267	srp19	92	67.692	ENSPANG00000004370	-	90	68.217	Papio_anubis
ENSORLG00000028267	srp19	95	76.692	ENSPKIG00000018671	srp19	94	76.692	Paramormyrops_kingsleyae
ENSORLG00000028267	srp19	85	65.000	ENSPSIG00000013811	SRP19	93	65.574	Pelodiscus_sinensis
ENSORLG00000028267	srp19	95	87.218	ENSPMGG00000015313	srp19	94	87.218	Periophthalmus_magnuspinnatus
ENSORLG00000028267	srp19	87	70.833	ENSPEMG00000004412	-	88	71.074	Peromyscus_maniculatus_bairdii
ENSORLG00000028267	srp19	96	65.672	ENSPMAG00000002685	srp19	94	66.165	Petromyzon_marinus
ENSORLG00000028267	srp19	94	68.182	ENSPCIG00000010250	SRP19	93	68.657	Phascolarctos_cinereus
ENSORLG00000028267	srp19	95	89.474	ENSPFOG00000015887	srp19	94	89.474	Poecilia_formosa
ENSORLG00000028267	srp19	95	89.474	ENSPLAG00000007784	srp19	94	89.474	Poecilia_latipinna
ENSORLG00000028267	srp19	95	89.474	ENSPMEG00000003056	srp19	94	89.474	Poecilia_mexicana
ENSORLG00000028267	srp19	95	89.474	ENSPREG00000017307	srp19	94	89.474	Poecilia_reticulata
ENSORLG00000028267	srp19	92	67.692	ENSPPYG00000029584	SRP19	88	68.217	Pongo_abelii
ENSORLG00000028267	srp19	86	70.526	ENSPCAG00000000228	SRP19	66	70.526	Procavia_capensis
ENSORLG00000028267	srp19	92	67.692	ENSPCOG00000023239	SRP19	90	68.217	Propithecus_coquereli
ENSORLG00000028267	srp19	91	68.217	ENSPVAG00000004895	SRP19	90	68.217	Pteropus_vampyrus
ENSORLG00000028267	srp19	94	80.303	ENSPNAG00000009392	srp19	94	80.597	Pygocentrus_nattereri
ENSORLG00000028267	srp19	92	69.231	ENSRNOG00000020204	Srp19	90	69.767	Rattus_norvegicus
ENSORLG00000028267	srp19	92	67.692	ENSRBIG00000015627	-	90	68.217	Rhinopithecus_bieti
ENSORLG00000028267	srp19	53	62.667	ENSRBIG00000031651	-	83	62.667	Rhinopithecus_bieti
ENSORLG00000028267	srp19	91	60.630	ENSRBIG00000040440	-	90	61.240	Rhinopithecus_bieti
ENSORLG00000028267	srp19	88	54.032	ENSRROG00000037316	-	91	54.918	Rhinopithecus_roxellana
ENSORLG00000028267	srp19	91	60.630	ENSRROG00000037054	-	90	61.240	Rhinopithecus_roxellana
ENSORLG00000028267	srp19	91	69.767	ENSSBOG00000028071	-	90	69.767	Saimiri_boliviensis_boliviensis
ENSORLG00000028267	srp19	91	61.000	ENSSBOG00000032685	-	90	61.000	Saimiri_boliviensis_boliviensis
ENSORLG00000028267	srp19	95	84.211	ENSSFOG00015022139	srp19	94	84.211	Scleropages_formosus
ENSORLG00000028267	srp19	95	85.714	ENSSMAG00000016803	srp19	94	85.714	Scophthalmus_maximus
ENSORLG00000028267	srp19	92	87.000	ENSSDUG00000012930	srp19	94	78.472	Seriola_dumerili
ENSORLG00000028267	srp19	62	81.690	ENSSLDG00000021916	-	51	88.710	Seriola_lalandi_dorsalis
ENSORLG00000028267	srp19	91	68.217	ENSSARG00000000615	SRP19	90	68.217	Sorex_araneus
ENSORLG00000028267	srp19	87	69.919	ENSSPUG00000015769	SRP19	92	68.421	Sphenodon_punctatus
ENSORLG00000028267	srp19	91	68.217	ENSSSCG00000026230	SRP19	90	68.217	Sus_scrofa
ENSORLG00000028267	srp19	87	68.293	ENSTGUG00000001019	SRP19	91	66.917	Taeniopygia_guttata
ENSORLG00000028267	srp19	95	86.131	ENSTRUG00000023119	srp19	94	86.131	Takifugu_rubripes
ENSORLG00000028267	srp19	95	87.970	ENSTNIG00000018880	srp19	94	87.970	Tetraodon_nigroviridis
ENSORLG00000028267	srp19	90	68.687	ENSTTRG00000001690	SRP19	89	67.442	Tursiops_truncatus
ENSORLG00000028267	srp19	89	69.048	ENSUAMG00000000111	SRP19	90	69.767	Ursus_americanus
ENSORLG00000028267	srp19	91	69.767	ENSUMAG00000016997	SRP19	90	69.767	Ursus_maritimus
ENSORLG00000028267	srp19	91	68.992	ENSVPAG00000006001	SRP19	90	68.992	Vicugna_pacos
ENSORLG00000028267	srp19	92	68.627	ENSVVUG00000012423	SRP19	87	76.471	Vulpes_vulpes
ENSORLG00000028267	srp19	86	68.033	ENSXETG00000011993	srp19	94	63.910	Xenopus_tropicalis
ENSORLG00000028267	srp19	71	90.000	ENSXCOG00000012530	srp19	72	90.000	Xiphophorus_couchianus
ENSORLG00000028267	srp19	95	89.474	ENSXMAG00000029788	srp19	94	89.474	Xiphophorus_maculatus