EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028280 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8231 bases
Position: chr4:23693269-23701499
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000038523	RVT_1	PF00078.27	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000035083	-	1992	-	ENSORLP00000038523	663 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028280	-	94	62.693	ENSORLG00000026506	-	50	62.693
ENSORLG00000028280	-	94	63.014	ENSORLG00000027546	-	93	63.014
ENSORLG00000028280	-	87	63.844	ENSORLG00000025074	-	89	65.147
ENSORLG00000028280	-	94	65.861	ENSORLG00000027499	-	51	65.861
ENSORLG00000028280	-	78	56.137	ENSORLG00000004601	-	71	56.137
ENSORLG00000028280	-	82	39.799	ENSORLG00000024094	-	64	39.799
ENSORLG00000028280	-	62	65.893	ENSORLG00000024204	-	99	65.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028280	-	87	32.907	ENSHBUG00000007075	-	93	33.387	Haplochromis_burtoni
ENSORLG00000028280	-	91	43.364	ENSKMAG00000011137	-	88	43.364	Kryptolebias_marmoratus
ENSORLG00000028280	-	94	43.114	ENSKMAG00000003929	-	92	43.114	Kryptolebias_marmoratus
ENSORLG00000028280	-	91	43.810	ENSKMAG00000012078	-	93	43.810	Kryptolebias_marmoratus
ENSORLG00000028280	-	81	40.949	ENSMAMG00000018686	-	82	40.949	Mastacembelus_armatus
ENSORLG00000028280	-	81	40.949	ENSMAMG00000018497	-	82	40.949	Mastacembelus_armatus
ENSORLG00000028280	-	83	34.242	ENSMAMG00000007322	-	91	35.026	Mastacembelus_armatus
ENSORLG00000028280	-	80	36.929	ENSMALG00000019992	-	83	36.929	Monopterus_albus
ENSORLG00000028280	-	81	40.342	ENSORLG00020005313	-	92	40.342	Oryzias_latipes_hni
ENSORLG00000028280	-	88	62.252	ENSORLG00020007459	-	95	59.750	Oryzias_latipes_hni
ENSORLG00000028280	-	92	64.342	ENSORLG00015007379	-	90	64.342	Oryzias_latipes_hsok
ENSORLG00000028280	-	93	61.271	ENSORLG00015007730	-	100	61.271	Oryzias_latipes_hsok
ENSORLG00000028280	-	98	63.450	ENSORLG00015004347	-	81	63.450	Oryzias_latipes_hsok
ENSORLG00000028280	-	93	65.000	ENSORLG00015017597	-	83	65.000	Oryzias_latipes_hsok
ENSORLG00000028280	-	86	62.205	ENSORLG00015020292	-	91	61.890	Oryzias_latipes_hsok
ENSORLG00000028280	-	89	32.843	ENSPKIG00000010460	-	92	32.843	Paramormyrops_kingsleyae
ENSORLG00000028280	-	78	43.534	ENSSDUG00000008761	-	89	43.534	Seriola_dumerili
ENSORLG00000028280	-	94	43.873	ENSXMAG00000026647	-	93	43.873	Xiphophorus_maculatus
ENSORLG00000028280	-	81	44.578	ENSXMAG00000023632	-	85	44.578	Xiphophorus_maculatus