EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028353 (Gene tree)
Gene ID: 101155350
Gene Symbol: LSM14B (1 of many)
Alias: -
Full Name: protein LSM14 homolog A
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 7019 bases
Position: chr7:18192717-18199735
Accession: 101155350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000042842	FDF	PF09532.10	1e-12	1	1
ENSORLP00000042842	LSM14	PF12701.7	1.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045089	LSM14B (1 of many)-201	6120	XM_004070560	ENSORLP00000042842	375 (aa)	XP_004070608	UPI0002A48F3B

Gene Model

Click here to download ENSORLG00000028353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028353	LSM14B	90	44.023	ENSORLG00000013525	lsm14b	92	45.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028353	LSM14B	91	46.154	ENSG00000149657	LSM14B	99	43.322	Homo_sapiens
ENSORLG00000028353	LSM14B	90	45.821	ENSAPOG00000001780	lsm14b	92	46.779	Acanthochromis_polyacanthus
ENSORLG00000028353	LSM14B	91	41.000	ENSAMEG00000013430	LSM14B	94	42.092	Ailuropoda_melanoleuca
ENSORLG00000028353	LSM14B	91	45.821	ENSACIG00000012266	lsm14b	93	46.499	Amphilophus_citrinellus
ENSORLG00000028353	LSM14B	62	44.939	ENSACIG00000003147	LSM14B	91	47.390	Amphilophus_citrinellus
ENSORLG00000028353	LSM14B	90	45.821	ENSAOCG00000012380	lsm14b	92	46.779	Amphiprion_ocellaris
ENSORLG00000028353	LSM14B	98	60.106	ENSAOCG00000006667	LSM14B	93	60.942	Amphiprion_ocellaris
ENSORLG00000028353	LSM14B	90	44.412	ENSAPEG00000023633	lsm14b	91	44.857	Amphiprion_percula
ENSORLG00000028353	LSM14B	90	46.199	ENSATEG00000016603	lsm14b	92	46.439	Anabas_testudineus
ENSORLG00000028353	LSM14B	69	52.448	ENSATEG00000015895	LSM14B	90	50.871	Anabas_testudineus
ENSORLG00000028353	LSM14B	83	37.534	ENSAPLG00000013203	LSM14B	93	37.240	Anas_platyrhynchos
ENSORLG00000028353	LSM14B	91	45.604	ENSACAG00000016195	LSM14B	93	46.917	Anolis_carolinensis
ENSORLG00000028353	LSM14B	91	45.706	ENSANAG00000037915	LSM14B	92	46.467	Aotus_nancymaae
ENSORLG00000028353	LSM14B	66	43.701	ENSACLG00000008384	-	81	44.082	Astatotilapia_calliptera
ENSORLG00000028353	LSM14B	91	46.264	ENSACLG00000019663	lsm14b	93	46.927	Astatotilapia_calliptera
ENSORLG00000028353	LSM14B	66	45.882	ENSACLG00000011955	-	83	46.748	Astatotilapia_calliptera
ENSORLG00000028353	LSM14B	66	48.235	ENSACLG00000019624	-	84	49.187	Astatotilapia_calliptera
ENSORLG00000028353	LSM14B	91	46.797	ENSAMXG00000002865	lsm14b	93	48.641	Astyanax_mexicanus
ENSORLG00000028353	LSM14B	91	41.750	ENSBTAG00000021558	LSM14B	93	41.951	Bos_taurus
ENSORLG00000028353	LSM14B	91	45.856	ENSCJAG00000014434	LSM14B	92	46.612	Callithrix_jacchus
ENSORLG00000028353	LSM14B	81	37.778	ENSCAFG00000012518	LSM14B	92	38.978	Canis_familiaris
ENSORLG00000028353	LSM14B	91	44.972	ENSCAFG00020022150	LSM14B	92	45.676	Canis_lupus_dingo
ENSORLG00000028353	LSM14B	96	37.302	ENSCHIG00000022681	-	90	38.310	Capra_hircus
ENSORLG00000028353	LSM14B	91	45.983	ENSCHIG00000010284	-	92	46.361	Capra_hircus
ENSORLG00000028353	LSM14B	81	42.857	ENSTSYG00000031914	LSM14B	82	43.769	Carlito_syrichta
ENSORLG00000028353	LSM14B	81	41.796	ENSCAPG00000013059	LSM14B	92	42.424	Cavia_aperea
ENSORLG00000028353	LSM14B	81	41.925	ENSCPOG00000038080	LSM14B	92	42.553	Cavia_porcellus
ENSORLG00000028353	LSM14B	91	45.706	ENSCCAG00000021267	LSM14B	92	46.612	Cebus_capucinus
ENSORLG00000028353	LSM14B	90	33.811	ENSCCAG00000024900	-	76	35.040	Cebus_capucinus
ENSORLG00000028353	LSM14B	91	45.604	ENSCATG00000036006	LSM14B	92	46.113	Cercocebus_atys
ENSORLG00000028353	LSM14B	81	41.066	ENSCLAG00000003186	LSM14B	92	42.202	Chinchilla_lanigera
ENSORLG00000028353	LSM14B	91	41.935	ENSCSAG00000015729	LSM14B	93	42.683	Chlorocebus_sabaeus
ENSORLG00000028353	LSM14B	91	40.887	ENSCPBG00000027065	LSM14B	94	42.373	Chrysemys_picta_bellii
ENSORLG00000028353	LSM14B	81	42.593	ENSCANG00000036986	LSM14B	92	43.505	Colobus_angolensis_palliatus
ENSORLG00000028353	LSM14B	91	46.409	ENSCGRG00001018399	Lsm14b	92	47.154	Cricetulus_griseus_chok1gshd
ENSORLG00000028353	LSM14B	61	34.982	ENSCGRG00000006111	-	93	36.207	Cricetulus_griseus_crigri
ENSORLG00000028353	LSM14B	90	43.567	ENSCSEG00000004722	lsm14b	93	42.978	Cynoglossus_semilaevis
ENSORLG00000028353	LSM14B	98	55.438	ENSCSEG00000020669	LSM14B	93	56.077	Cynoglossus_semilaevis
ENSORLG00000028353	LSM14B	66	45.136	ENSCVAG00000012433	-	91	45.306	Cyprinodon_variegatus
ENSORLG00000028353	LSM14B	91	47.091	ENSDARG00000025386	lsm14b	93	46.649	Danio_rerio
ENSORLG00000028353	LSM14B	61	33.688	ENSDNOG00000025246	LSM14B	91	35.395	Dasypus_novemcinctus
ENSORLG00000028353	LSM14B	81	42.154	ENSDORG00000016683	Lsm14b	91	35.517	Dipodomys_ordii
ENSORLG00000028353	LSM14B	93	40.872	ENSETEG00000001869	-	92	40.872	Echinops_telfairi
ENSORLG00000028353	LSM14B	56	36.000	ENSETEG00000011188	-	92	37.333	Echinops_telfairi
ENSORLG00000028353	LSM14B	61	34.855	ENSEASG00005023218	LSM14B	91	34.812	Equus_asinus_asinus
ENSORLG00000028353	LSM14B	91	45.682	ENSECAG00000010659	LSM14B	92	45.576	Equus_caballus
ENSORLG00000028353	LSM14B	97	49.206	ENSELUG00000005780	lsm14b	93	49.041	Esox_lucius
ENSORLG00000028353	LSM14B	91	50.862	ENSELUG00000016299	LSM14B	93	50.986	Esox_lucius
ENSORLG00000028353	LSM14B	91	45.833	ENSFCAG00000003248	LSM14B	92	46.612	Felis_catus
ENSORLG00000028353	LSM14B	81	38.251	ENSFALG00000010618	LSM14B	93	37.831	Ficedula_albicollis
ENSORLG00000028353	LSM14B	81	41.121	ENSFDAG00000002214	LSM14B	92	42.249	Fukomys_damarensis
ENSORLG00000028353	LSM14B	81	58.786	ENSFHEG00000003362	LSM14B	82	59.006	Fundulus_heteroclitus
ENSORLG00000028353	LSM14B	90	42.816	ENSFHEG00000006237	lsm14b	92	43.143	Fundulus_heteroclitus
ENSORLG00000028353	LSM14B	96	41.398	ENSGMOG00000017115	lsm14b	90	44.886	Gadus_morhua
ENSORLG00000028353	LSM14B	91	46.703	ENSGALG00000005125	LSM14B	93	47.185	Gallus_gallus
ENSORLG00000028353	LSM14B	66	51.406	ENSGAFG00000013723	LSM14B	90	51.055	Gambusia_affinis
ENSORLG00000028353	LSM14B	90	41.040	ENSGAFG00000020318	lsm14b	92	41.127	Gambusia_affinis
ENSORLG00000028353	LSM14B	91	44.000	ENSGACG00000009973	lsm14b	93	43.889	Gasterosteus_aculeatus
ENSORLG00000028353	LSM14B	53	36.744	ENSGAGG00000004106	LSM14B	80	38.565	Gopherus_agassizii
ENSORLG00000028353	LSM14B	82	42.121	ENSGGOG00000005630	LSM14B	87	43.027	Gorilla_gorilla
ENSORLG00000028353	LSM14B	91	44.475	ENSHGLG00000015055	LSM14B	92	45.799	Heterocephalus_glaber_female
ENSORLG00000028353	LSM14B	81	39.498	ENSHGLG00100015273	LSM14B	92	41.104	Heterocephalus_glaber_male
ENSORLG00000028353	LSM14B	98	57.447	ENSHCOG00000018747	LSM14B	94	58.496	Hippocampus_comes
ENSORLG00000028353	LSM14B	60	38.428	ENSHCOG00000004867	lsm14b	88	38.494	Hippocampus_comes
ENSORLG00000028353	LSM14B	91	47.383	ENSIPUG00000014946	lsm14b	88	48.774	Ictalurus_punctatus
ENSORLG00000028353	LSM14B	81	40.810	ENSSTOG00000020482	LSM14B	92	42.857	Ictidomys_tridecemlineatus
ENSORLG00000028353	LSM14B	90	47.354	ENSJJAG00000012728	Lsm14b	91	48.087	Jaculus_jaculus
ENSORLG00000028353	LSM14B	53	57.143	ENSKMAG00000012834	-	89	59.024	Kryptolebias_marmoratus
ENSORLG00000028353	LSM14B	90	44.568	ENSKMAG00000017524	lsm14b	92	43.989	Kryptolebias_marmoratus
ENSORLG00000028353	LSM14B	69	45.000	ENSLBEG00000007951	LSM14B	88	45.763	Labrus_bergylta
ENSORLG00000028353	LSM14B	91	58.865	ENSLACG00000003849	LSM14B	94	43.165	Latimeria_chalumnae
ENSORLG00000028353	LSM14B	91	47.091	ENSLOCG00000003746	lsm14b	93	48.787	Lepisosteus_oculatus
ENSORLG00000028353	LSM14B	82	41.358	ENSLAFG00000007492	LSM14B	92	43.243	Loxodonta_africana
ENSORLG00000028353	LSM14B	91	46.154	ENSMFAG00000041479	LSM14B	92	46.900	Macaca_fascicularis
ENSORLG00000028353	LSM14B	91	46.154	ENSMMUG00000014084	LSM14B	92	46.900	Macaca_mulatta
ENSORLG00000028353	LSM14B	91	46.154	ENSMNEG00000045573	LSM14B	92	46.900	Macaca_nemestrina
ENSORLG00000028353	LSM14B	81	41.975	ENSMLEG00000040895	LSM14B	92	42.643	Mandrillus_leucophaeus
ENSORLG00000028353	LSM14B	90	42.179	ENSMAMG00000020539	lsm14b	92	42.935	Mastacembelus_armatus
ENSORLG00000028353	LSM14B	99	61.478	ENSMAMG00000024124	LSM14B	93	62.117	Mastacembelus_armatus
ENSORLG00000028353	LSM14B	66	42.913	ENSMZEG00005002688	-	83	44.082	Maylandia_zebra
ENSORLG00000028353	LSM14B	91	45.977	ENSMZEG00005000987	lsm14b	93	46.648	Maylandia_zebra
ENSORLG00000028353	LSM14B	93	58.791	ENSMZEG00005026001	LSM14B	96	60.109	Maylandia_zebra
ENSORLG00000028353	LSM14B	66	42.520	ENSMZEG00005026087	-	83	43.673	Maylandia_zebra
ENSORLG00000028353	LSM14B	83	43.675	ENSMGAG00000005300	LSM14B	92	44.282	Meleagris_gallopavo
ENSORLG00000028353	LSM14B	91	45.580	ENSMAUG00000020700	Lsm14b	92	46.883	Mesocricetus_auratus
ENSORLG00000028353	LSM14B	91	45.856	ENSMICG00000014675	LSM14B	92	46.612	Microcebus_murinus
ENSORLG00000028353	LSM14B	91	46.429	ENSMOCG00000020600	Lsm14b	92	47.154	Microtus_ochrogaster
ENSORLG00000028353	LSM14B	54	38.095	ENSMOCG00000005119	-	69	39.524	Microtus_ochrogaster
ENSORLG00000028353	LSM14B	91	40.997	ENSMMOG00000020042	lsm14b	96	42.204	Mola_mola
ENSORLG00000028353	LSM14B	91	55.460	ENSMMOG00000017321	LSM14B	93	55.337	Mola_mola
ENSORLG00000028353	LSM14B	61	35.461	ENSMODG00000016690	LSM14B	91	36.552	Monodelphis_domestica
ENSORLG00000028353	LSM14B	93	61.732	ENSMALG00000022251	LSM14B	93	62.500	Monopterus_albus
ENSORLG00000028353	LSM14B	99	42.781	ENSMALG00000004783	lsm14b	93	43.466	Monopterus_albus
ENSORLG00000028353	LSM14B	91	45.580	MGP_CAROLIEiJ_G0024770	Lsm14b	92	46.341	Mus_caroli
ENSORLG00000028353	LSM14B	91	45.580	ENSMUSG00000039108	Lsm14b	92	46.341	Mus_musculus
ENSORLG00000028353	LSM14B	91	45.580	MGP_PahariEiJ_G0026214	Lsm14b	92	46.341	Mus_pahari
ENSORLG00000028353	LSM14B	91	45.580	MGP_SPRETEiJ_G0025693	Lsm14b	92	46.341	Mus_spretus
ENSORLG00000028353	LSM14B	86	36.483	ENSMPUG00000007584	LSM14B	93	38.718	Mustela_putorius_furo
ENSORLG00000028353	LSM14B	91	45.634	ENSMLUG00000000304	LSM14B	92	46.301	Myotis_lucifugus
ENSORLG00000028353	LSM14B	81	42.593	ENSNLEG00000015757	LSM14B	92	43.505	Nomascus_leucogenys
ENSORLG00000028353	LSM14B	65	60.432	ENSMEUG00000008267	-	71	60.714	Notamacropus_eugenii
ENSORLG00000028353	LSM14B	91	44.475	ENSODEG00000004099	LSM14B	92	45.799	Octodon_degus
ENSORLG00000028353	LSM14B	91	46.418	ENSONIG00000020318	lsm14b	93	47.075	Oreochromis_niloticus
ENSORLG00000028353	LSM14B	73	43.929	ENSOANG00000003370	LSM14B	94	44.128	Ornithorhynchus_anatinus
ENSORLG00000028353	LSM14B	81	43.519	ENSOCUG00000006279	LSM14B	92	43.505	Oryctolagus_cuniculus
ENSORLG00000028353	LSM14B	69	75.439	ENSORLG00020018191	-	98	77.193	Oryzias_latipes_hni
ENSORLG00000028353	LSM14B	90	44.023	ENSORLG00020020553	lsm14b	92	45.042	Oryzias_latipes_hni
ENSORLG00000028353	LSM14B	100	98.933	ENSORLG00015013157	LSM14B	100	98.933	Oryzias_latipes_hsok
ENSORLG00000028353	LSM14B	90	44.023	ENSORLG00015016862	lsm14b	92	45.042	Oryzias_latipes_hsok
ENSORLG00000028353	LSM14B	90	43.732	ENSOMEG00000023917	lsm14b	91	44.759	Oryzias_melastigma
ENSORLG00000028353	LSM14B	51	77.165	ENSOMEG00000000171	-	87	61.538	Oryzias_melastigma
ENSORLG00000028353	LSM14B	91	42.394	ENSOGAG00000003915	LSM14B	93	43.137	Otolemur_garnettii
ENSORLG00000028353	LSM14B	83	37.838	ENSOARG00000014706	LSM14B	93	38.421	Ovis_aries
ENSORLG00000028353	LSM14B	82	42.121	ENSPPAG00000035799	LSM14B	87	43.027	Pan_paniscus
ENSORLG00000028353	LSM14B	91	45.833	ENSPPRG00000009197	LSM14B	92	46.612	Panthera_pardus
ENSORLG00000028353	LSM14B	61	35.537	ENSPTIG00000021518	LSM14B	92	36.000	Panthera_tigris_altaica
ENSORLG00000028353	LSM14B	91	46.154	ENSPTRG00000013696	LSM14B	92	46.900	Pan_troglodytes
ENSORLG00000028353	LSM14B	91	45.879	ENSPANG00000011747	LSM14B	92	46.631	Papio_anubis
ENSORLG00000028353	LSM14B	91	47.309	ENSPKIG00000003275	lsm14b	88	68.750	Paramormyrops_kingsleyae
ENSORLG00000028353	LSM14B	81	43.161	ENSPSIG00000014762	LSM14B	92	44.379	Pelodiscus_sinensis
ENSORLG00000028353	LSM14B	91	45.983	ENSPEMG00000017688	Lsm14b	93	46.739	Peromyscus_maniculatus_bairdii
ENSORLG00000028353	LSM14B	91	46.089	ENSPCIG00000013405	LSM14B	92	47.568	Phascolarctos_cinereus
ENSORLG00000028353	LSM14B	98	41.667	ENSPFOG00000005631	lsm14b	92	42.265	Poecilia_formosa
ENSORLG00000028353	LSM14B	91	62.209	ENSPLAG00000005793	LSM14B	93	61.299	Poecilia_latipinna
ENSORLG00000028353	LSM14B	98	41.927	ENSPLAG00000002449	lsm14b	92	42.541	Poecilia_latipinna
ENSORLG00000028353	LSM14B	90	43.895	ENSPMEG00000000745	lsm14b	92	43.750	Poecilia_mexicana
ENSORLG00000028353	LSM14B	90	61.696	ENSPMEG00000022953	LSM14B	93	61.017	Poecilia_mexicana
ENSORLG00000028353	LSM14B	62	50.000	ENSPREG00000007828	LSM14B	89	49.609	Poecilia_reticulata
ENSORLG00000028353	LSM14B	91	45.856	ENSPCOG00000013625	LSM14B	92	46.612	Propithecus_coquereli
ENSORLG00000028353	LSM14B	91	48.451	ENSPNAG00000012777	lsm14b	93	49.176	Pygocentrus_nattereri
ENSORLG00000028353	LSM14B	91	41.439	ENSRNOG00000054557	Lsm14b	93	42.579	Rattus_norvegicus
ENSORLG00000028353	LSM14B	81	42.462	ENSRBIG00000033461	LSM14B	91	43.373	Rhinopithecus_bieti
ENSORLG00000028353	LSM14B	82	43.505	ENSRROG00000042949	LSM14B	83	44.118	Rhinopithecus_roxellana
ENSORLG00000028353	LSM14B	81	41.615	ENSSBOG00000032820	LSM14B	92	42.553	Saimiri_boliviensis_boliviensis
ENSORLG00000028353	LSM14B	82	42.683	ENSSHAG00000015528	LSM14B	90	43.917	Sarcophilus_harrisii
ENSORLG00000028353	LSM14B	91	46.991	ENSSFOG00015004627	lsm14b	94	49.584	Scleropages_formosus
ENSORLG00000028353	LSM14B	98	61.111	ENSSMAG00000000135	LSM14B	93	62.534	Scophthalmus_maximus
ENSORLG00000028353	LSM14B	91	45.402	ENSSMAG00000012725	lsm14b	93	44.972	Scophthalmus_maximus
ENSORLG00000028353	LSM14B	91	46.307	ENSSDUG00000020977	lsm14b	93	46.133	Seriola_dumerili
ENSORLG00000028353	LSM14B	93	66.761	ENSSDUG00000022770	LSM14B	93	68.067	Seriola_dumerili
ENSORLG00000028353	LSM14B	62	51.538	ENSSLDG00000011354	-	90	54.580	Seriola_lalandi_dorsalis
ENSORLG00000028353	LSM14B	52	34.272	ENSSARG00000007749	-	97	35.681	Sorex_araneus
ENSORLG00000028353	LSM14B	91	41.832	ENSSPUG00000014360	LSM14B	93	46.398	Sphenodon_punctatus
ENSORLG00000028353	LSM14B	69	47.312	ENSSPAG00000018854	-	90	46.484	Stegastes_partitus
ENSORLG00000028353	LSM14B	90	45.161	ENSSPAG00000020915	lsm14b	91	46.154	Stegastes_partitus
ENSORLG00000028353	LSM14B	91	44.904	ENSSSCG00000026052	LSM14B	91	33.788	Sus_scrofa
ENSORLG00000028353	LSM14B	81	42.683	ENSTGUG00000007884	LSM14B	92	43.917	Taeniopygia_guttata
ENSORLG00000028353	LSM14B	96	44.444	ENSTRUG00000011354	lsm14b	92	45.198	Takifugu_rubripes
ENSORLG00000028353	LSM14B	93	60.000	ENSTRUG00000001529	LSM14B	93	60.784	Takifugu_rubripes
ENSORLG00000028353	LSM14B	90	45.580	ENSTNIG00000002445	lsm14b	92	45.799	Tetraodon_nigroviridis
ENSORLG00000028353	LSM14B	73	74.359	ENSTTRG00000011043	LSM14B	74	74.359	Tursiops_truncatus
ENSORLG00000028353	LSM14B	91	39.612	ENSUAMG00000025298	LSM14B	93	40.970	Ursus_americanus
ENSORLG00000028353	LSM14B	91	39.612	ENSUMAG00000000480	LSM14B	93	40.970	Ursus_maritimus
ENSORLG00000028353	LSM14B	81	41.121	ENSVVUG00000015920	LSM14B	91	42.042	Vulpes_vulpes
ENSORLG00000028353	LSM14B	86	43.413	ENSXETG00000001997	lsm14b	99	45.562	Xenopus_tropicalis
ENSORLG00000028353	LSM14B	90	41.595	ENSXMAG00000010013	lsm14b	92	41.667	Xiphophorus_maculatus