EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028372 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 2907 bases
Position: chr9:31095018-31097924
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043225	RVT_1	PF00078.27	1.7e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029493	-	2907	-	ENSORLP00000043225	968 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028372's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028372	-	93	45.736	ENSORLG00000021884	-	72	45.736
ENSORLG00000028372	-	72	31.068	ENSORLG00000027515	-	66	30.801
ENSORLG00000028372	-	90	31.050	ENSORLG00000025035	-	71	30.947
ENSORLG00000028372	-	99	42.490	ENSORLG00000027382	-	78	42.490
ENSORLG00000028372	-	90	30.786	ENSORLG00000026409	-	72	30.574
ENSORLG00000028372	-	52	99.198	ENSORLG00000026021	-	59	99.198
ENSORLG00000028372	-	75	30.759	ENSORLG00000024921	-	67	30.504
ENSORLG00000028372	-	90	30.684	ENSORLG00000027879	-	71	30.473
ENSORLG00000028372	-	94	41.383	ENSORLG00000028184	-	73	41.383
ENSORLG00000028372	-	72	30.844	ENSORLG00000024415	-	66	30.249
ENSORLG00000028372	-	90	30.863	ENSORLG00000025887	-	76	30.650
ENSORLG00000028372	-	90	30.786	ENSORLG00000025676	-	73	30.574
ENSORLG00000028372	-	90	30.676	ENSORLG00000022848	-	71	30.464
ENSORLG00000028372	-	50	30.661	ENSORLG00000022016	-	80	31.308
ENSORLG00000028372	-	54	31.911	ENSORLG00000029308	-	50	32.816
ENSORLG00000028372	-	86	41.240	ENSORLG00000030600	-	71	41.240
ENSORLG00000028372	-	90	30.786	ENSORLG00000030174	-	69	30.574
ENSORLG00000028372	-	90	30.973	ENSORLG00000025213	-	71	30.761
ENSORLG00000028372	-	90	30.786	ENSORLG00000023962	-	71	30.574
ENSORLG00000028372	-	93	98.670	ENSORLG00000027203	-	73	98.670
ENSORLG00000028372	-	80	42.065	ENSORLG00000027119	-	70	42.065
ENSORLG00000028372	-	94	41.273	ENSORLG00000028539	-	73	41.273
ENSORLG00000028372	-	90	30.565	ENSORLG00000024230	-	71	30.353
ENSORLG00000028372	-	59	30.730	ENSORLG00000030529	-	61	30.051
ENSORLG00000028372	-	70	44.970	ENSORLG00000028041	-	71	44.970
ENSORLG00000028372	-	76	43.243	ENSORLG00000026865	-	69	42.231
ENSORLG00000028372	-	58	32.069	ENSORLG00000023016	-	60	30.862
ENSORLG00000028372	-	93	98.448	ENSORLG00000027038	-	73	98.448
ENSORLG00000028372	-	90	30.752	ENSORLG00000022242	-	71	30.540
ENSORLG00000028372	-	94	41.054	ENSORLG00000025257	-	73	41.054
ENSORLG00000028372	-	90	30.786	ENSORLG00000025803	-	71	30.574
ENSORLG00000028372	-	78	99.204	ENSORLG00000022810	-	69	99.204
ENSORLG00000028372	-	93	57.350	ENSORLG00000022021	-	72	57.350
ENSORLG00000028372	-	93	41.593	ENSORLG00000027316	-	73	41.593
ENSORLG00000028372	-	84	30.549	ENSORLG00000028313	-	98	30.321
ENSORLG00000028372	-	93	45.243	ENSORLG00000024817	-	96	45.243
ENSORLG00000028372	-	67	59.538	ENSORLG00000030108	-	65	59.538
ENSORLG00000028372	-	90	30.353	ENSORLG00000028439	-	85	30.143
ENSORLG00000028372	-	90	30.786	ENSORLG00000026236	-	71	30.574
ENSORLG00000028372	-	90	30.676	ENSORLG00000027816	-	84	30.430
ENSORLG00000028372	-	72	30.028	ENSORLG00000025613	-	66	30.000
ENSORLG00000028372	-	93	45.515	ENSORLG00000022718	-	73	45.515
ENSORLG00000028372	-	93	45.293	ENSORLG00000024361	-	73	45.293
ENSORLG00000028372	-	55	30.419	ENSORLG00000029491	-	57	30.435
ENSORLG00000028372	-	90	30.676	ENSORLG00000025057	-	71	30.464
ENSORLG00000028372	-	90	30.574	ENSORLG00000022453	-	71	30.363
ENSORLG00000028372	-	90	30.676	ENSORLG00000022458	-	71	30.464

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028372	-	92	45.373	ENSACLG00000014667	-	72	45.373	Astatotilapia_calliptera
ENSORLG00000028372	-	79	43.580	ENSACLG00000005544	-	69	43.580	Astatotilapia_calliptera
ENSORLG00000028372	-	94	49.507	ENSACLG00000006792	-	76	49.507	Astatotilapia_calliptera
ENSORLG00000028372	-	86	42.086	ENSACLG00000016372	-	71	42.086	Astatotilapia_calliptera
ENSORLG00000028372	-	93	48.441	ENSAMXG00000030338	-	79	48.441	Astyanax_mexicanus
ENSORLG00000028372	-	94	42.514	ENSDARG00000105300	BX927081.1	73	42.514	Danio_rerio
ENSORLG00000028372	-	93	42.699	ENSDARG00000099710	BX284696.1	73	42.652	Danio_rerio
ENSORLG00000028372	-	94	40.153	ENSDARG00000100925	CU104709.1	73	40.153	Danio_rerio
ENSORLG00000028372	-	93	42.699	ENSDARG00000100234	BX511246.1	72	42.699	Danio_rerio
ENSORLG00000028372	-	94	43.275	ENSDARG00000103976	BX544877.1	74	43.275	Danio_rerio
ENSORLG00000028372	-	94	43.275	ENSDARG00000103841	CU024870.1	75	43.275	Danio_rerio
ENSORLG00000028372	-	58	45.326	ENSDARG00000086849	si:dkey-187k19.2	99	45.326	Danio_rerio
ENSORLG00000028372	-	65	44.146	ENSDARG00000098557	BX323564.1	66	44.146	Danio_rerio
ENSORLG00000028372	-	67	46.880	ENSKMAG00000018235	-	70	46.880	Kryptolebias_marmoratus
ENSORLG00000028372	-	91	52.614	ENSKMAG00000014582	-	72	52.614	Kryptolebias_marmoratus
ENSORLG00000028372	-	94	42.779	ENSKMAG00000011717	-	73	42.779	Kryptolebias_marmoratus
ENSORLG00000028372	-	62	35.314	ENSLOCG00000000531	-	98	34.876	Lepisosteus_oculatus
ENSORLG00000028372	-	86	52.319	ENSONIG00000020693	-	100	52.319	Oreochromis_niloticus
ENSORLG00000028372	-	78	41.919	ENSORLG00020008557	-	69	41.919	Oryzias_latipes_hni
ENSORLG00000028372	-	81	43.742	ENSORLG00020013618	-	99	43.742	Oryzias_latipes_hni
ENSORLG00000028372	-	86	44.577	ENSORLG00020007542	-	99	44.577	Oryzias_latipes_hni
ENSORLG00000028372	-	81	43.742	ENSORLG00020013755	-	100	43.742	Oryzias_latipes_hni
ENSORLG00000028372	-	58	45.760	ENSORLG00020006818	-	63	45.760	Oryzias_latipes_hni
ENSORLG00000028372	-	80	57.326	ENSORLG00020008765	-	99	57.326	Oryzias_latipes_hni
ENSORLG00000028372	-	64	45.000	ENSORLG00020018783	-	63	43.760	Oryzias_latipes_hni
ENSORLG00000028372	-	93	41.482	ENSORLG00020016870	-	73	41.482	Oryzias_latipes_hni
ENSORLG00000028372	-	95	43.844	ENSORLG00020016067	-	99	43.844	Oryzias_latipes_hni
ENSORLG00000028372	-	94	39.102	ENSORLG00020021337	-	90	39.102	Oryzias_latipes_hni
ENSORLG00000028372	-	58	45.936	ENSORLG00020021090	-	63	45.936	Oryzias_latipes_hni
ENSORLG00000028372	-	93	45.404	ENSORLG00015019437	-	92	45.404	Oryzias_latipes_hsok
ENSORLG00000028372	-	86	57.143	ENSORLG00015021204	-	99	57.143	Oryzias_latipes_hsok
ENSORLG00000028372	-	94	48.906	ENSORLG00015007330	-	74	48.906	Oryzias_latipes_hsok
ENSORLG00000028372	-	97	44.339	ENSORLG00015014452	-	76	44.339	Oryzias_latipes_hsok
ENSORLG00000028372	-	93	45.293	ENSORLG00015019816	-	72	45.293	Oryzias_latipes_hsok
ENSORLG00000028372	-	93	49.446	ENSOMEG00000021029	-	84	49.446	Oryzias_melastigma
ENSORLG00000028372	-	77	40.637	ENSOMEG00000015408	-	69	40.505	Oryzias_melastigma
ENSORLG00000028372	-	89	41.590	ENSPKIG00000020531	-	82	41.763	Paramormyrops_kingsleyae
ENSORLG00000028372	-	66	39.225	ENSPFOG00000023623	-	100	39.225	Poecilia_formosa
ENSORLG00000028372	-	83	35.504	ENSPFOG00000013154	-	100	35.504	Poecilia_formosa
ENSORLG00000028372	-	80	43.573	ENSXMAG00000022515	-	81	43.573	Xiphophorus_maculatus
ENSORLG00000028372	-	80	43.702	ENSXMAG00000026019	-	70	43.702	Xiphophorus_maculatus
ENSORLG00000028372	-	83	43.548	ENSXMAG00000024671	-	71	43.548	Xiphophorus_maculatus