EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028454 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1402 bases
Position: chr18:29376025-29377426
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000040744	RVT_1	PF00078.27	6.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045921	-	1402	-	ENSORLP00000040744	315 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028454	-	98	47.588	ENSORLG00000023713	-	79	47.588
ENSORLG00000028454	-	98	41.875	ENSORLG00000024464	-	55	41.875
ENSORLG00000028454	-	63	51.000	ENSORLG00000028976	-	56	51.643
ENSORLG00000028454	-	97	44.805	ENSORLG00000022016	-	57	44.805
ENSORLG00000028454	-	78	50.202	ENSORLG00000028706	-	50	50.202
ENSORLG00000028454	-	98	44.373	ENSORLG00000024236	-	82	44.373
ENSORLG00000028454	-	73	35.622	ENSORLG00000029764	-	88	35.622
ENSORLG00000028454	-	98	36.570	ENSORLG00000029559	-	77	36.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028454	-	98	36.129	ENSAPOG00000001366	-	72	36.129	Acanthochromis_polyacanthus
ENSORLG00000028454	-	84	38.491	ENSAPOG00000014771	-	66	38.491	Acanthochromis_polyacanthus
ENSORLG00000028454	-	80	49.804	ENSAPOG00000015742	-	80	49.804	Acanthochromis_polyacanthus
ENSORLG00000028454	-	81	33.977	ENSACIG00000020856	-	55	33.977	Amphilophus_citrinellus
ENSORLG00000028454	-	72	36.404	ENSACIG00000020849	-	59	36.404	Amphilophus_citrinellus
ENSORLG00000028454	-	99	39.748	ENSACIG00000010538	-	81	39.748	Amphilophus_citrinellus
ENSORLG00000028454	-	88	52.708	ENSAOCG00000000894	-	83	52.708	Amphiprion_ocellaris
ENSORLG00000028454	-	99	38.978	ENSAOCG00000014605	-	61	38.978	Amphiprion_ocellaris
ENSORLG00000028454	-	99	50.962	ENSAOCG00000019069	-	85	50.962	Amphiprion_ocellaris
ENSORLG00000028454	-	58	37.297	ENSAOCG00000006855	-	50	37.297	Amphiprion_ocellaris
ENSORLG00000028454	-	92	35.855	ENSAOCG00000012592	-	71	35.855	Amphiprion_ocellaris
ENSORLG00000028454	-	76	40.984	ENSACAG00000010816	-	67	40.984	Anolis_carolinensis
ENSORLG00000028454	-	68	52.558	ENSACLG00000010837	-	53	52.558	Astatotilapia_calliptera
ENSORLG00000028454	-	97	35.275	ENSACLG00000011319	-	80	35.275	Astatotilapia_calliptera
ENSORLG00000028454	-	98	44.013	ENSACLG00000013571	-	76	44.013	Astatotilapia_calliptera
ENSORLG00000028454	-	99	45.714	ENSACLG00000012857	-	85	45.714	Astatotilapia_calliptera
ENSORLG00000028454	-	84	34.340	ENSAMXG00000038901	-	56	34.340	Astyanax_mexicanus
ENSORLG00000028454	-	97	30.645	ENSAMXG00000035718	-	58	30.645	Astyanax_mexicanus
ENSORLG00000028454	-	77	54.545	ENSAMXG00000041014	-	92	54.545	Astyanax_mexicanus
ENSORLG00000028454	-	78	47.581	ENSAMXG00000040763	-	63	47.581	Astyanax_mexicanus
ENSORLG00000028454	-	62	43.147	ENSCPBG00000017828	-	53	43.147	Chrysemys_picta_bellii
ENSORLG00000028454	-	98	42.395	ENSCVAG00000018360	-	74	42.395	Cyprinodon_variegatus
ENSORLG00000028454	-	99	37.898	ENSCVAG00000020933	-	69	37.898	Cyprinodon_variegatus
ENSORLG00000028454	-	98	35.922	ENSELUG00000014378	-	72	35.922	Esox_lucius
ENSORLG00000028454	-	91	36.458	ENSELUG00000000386	-	63	36.458	Esox_lucius
ENSORLG00000028454	-	99	32.278	ENSELUG00000002589	-	65	32.278	Esox_lucius
ENSORLG00000028454	-	98	34.615	ENSGAGG00000013921	-	83	34.615	Gopherus_agassizii
ENSORLG00000028454	-	75	31.489	ENSHBUG00000003796	-	54	31.489	Haplochromis_burtoni
ENSORLG00000028454	-	93	36.486	ENSHBUG00000011715	-	74	36.486	Haplochromis_burtoni
ENSORLG00000028454	-	99	55.696	ENSHBUG00000007736	-	76	55.696	Haplochromis_burtoni
ENSORLG00000028454	-	64	34.466	ENSIPUG00000010242	-	55	34.466	Ictalurus_punctatus
ENSORLG00000028454	-	98	43.042	ENSKMAG00000014393	-	73	43.042	Kryptolebias_marmoratus
ENSORLG00000028454	-	83	43.446	ENSLBEG00000004148	-	56	43.446	Labrus_bergylta
ENSORLG00000028454	-	96	35.762	ENSLBEG00000023714	-	80	35.762	Labrus_bergylta
ENSORLG00000028454	-	95	39.667	ENSLBEG00000020242	-	82	39.667	Labrus_bergylta
ENSORLG00000028454	-	97	35.275	ENSMZEG00005025877	-	72	35.275	Maylandia_zebra
ENSORLG00000028454	-	99	42.628	ENSMZEG00005011529	-	59	42.628	Maylandia_zebra
ENSORLG00000028454	-	99	42.628	ENSMZEG00005017030	-	59	42.628	Maylandia_zebra
ENSORLG00000028454	-	52	35.152	ENSMZEG00005008352	-	99	35.152	Maylandia_zebra
ENSORLG00000028454	-	88	47.842	ENSMZEG00005016362	-	98	47.842	Maylandia_zebra
ENSORLG00000028454	-	63	53.234	ENSMZEG00005006211	-	50	53.234	Maylandia_zebra
ENSORLG00000028454	-	97	35.275	ENSMZEG00005008304	-	72	35.275	Maylandia_zebra
ENSORLG00000028454	-	98	43.366	ENSNBRG00000012595	-	70	43.366	Neolamprologus_brichardi
ENSORLG00000028454	-	82	30.502	ENSNBRG00000022130	-	62	30.502	Neolamprologus_brichardi
ENSORLG00000028454	-	62	39.487	ENSNBRG00000003891	-	97	39.487	Neolamprologus_brichardi
ENSORLG00000028454	-	98	44.516	ENSNBRG00000000972	-	77	44.409	Neolamprologus_brichardi
ENSORLG00000028454	-	75	44.118	ENSNBRG00000013792	-	69	44.118	Neolamprologus_brichardi
ENSORLG00000028454	-	97	45.130	ENSORLG00020014626	-	57	45.130	Oryzias_latipes_hni
ENSORLG00000028454	-	78	49.593	ENSORLG00020007779	-	66	49.593	Oryzias_latipes_hni
ENSORLG00000028454	-	98	45.659	ENSORLG00020014149	-	97	45.659	Oryzias_latipes_hni
ENSORLG00000028454	-	78	49.798	ENSORLG00020007002	-	97	49.798	Oryzias_latipes_hni
ENSORLG00000028454	-	69	51.376	ENSORLG00020022004	-	74	51.376	Oryzias_latipes_hni
ENSORLG00000028454	-	78	49.593	ENSORLG00020018629	-	65	49.593	Oryzias_latipes_hni
ENSORLG00000028454	-	91	32.404	ENSORLG00020004063	-	82	32.404	Oryzias_latipes_hni
ENSORLG00000028454	-	99	40.385	ENSORLG00015020895	-	83	40.385	Oryzias_latipes_hsok
ENSORLG00000028454	-	78	50.407	ENSORLG00015007703	-	63	50.407	Oryzias_latipes_hsok
ENSORLG00000028454	-	99	37.700	ENSORLG00015021206	-	58	37.700	Oryzias_latipes_hsok
ENSORLG00000028454	-	87	42.182	ENSORLG00015000419	-	78	42.182	Oryzias_latipes_hsok
ENSORLG00000028454	-	92	42.612	ENSORLG00015022393	-	97	42.612	Oryzias_latipes_hsok
ENSORLG00000028454	-	77	39.754	ENSORLG00015021848	-	80	39.754	Oryzias_latipes_hsok
ENSORLG00000028454	-	78	36.585	ENSORLG00015008227	-	68	36.585	Oryzias_latipes_hsok
ENSORLG00000028454	-	94	35.786	ENSOMEG00000013211	-	70	35.786	Oryzias_melastigma
ENSORLG00000028454	-	73	57.143	ENSPKIG00000024018	-	81	57.143	Paramormyrops_kingsleyae
ENSORLG00000028454	-	70	70.136	ENSPKIG00000013511	-	76	70.136	Paramormyrops_kingsleyae
ENSORLG00000028454	-	81	35.409	ENSPMGG00000014421	-	63	35.409	Periophthalmus_magnuspinnatus
ENSORLG00000028454	-	97	36.624	ENSPLAG00000015080	-	73	36.624	Poecilia_latipinna
ENSORLG00000028454	-	70	35.526	ENSPMEG00000004673	-	56	35.526	Poecilia_mexicana
ENSORLG00000028454	-	98	30.844	ENSPREG00000021355	-	75	30.844	Poecilia_reticulata
ENSORLG00000028454	-	97	37.864	ENSPREG00000001352	-	85	37.864	Poecilia_reticulata
ENSORLG00000028454	-	97	37.217	ENSPREG00000010319	-	73	37.217	Poecilia_reticulata
ENSORLG00000028454	-	96	34.202	ENSPREG00000004933	-	77	34.202	Poecilia_reticulata
ENSORLG00000028454	-	98	39.806	ENSPREG00000006501	-	54	39.806	Poecilia_reticulata
ENSORLG00000028454	-	94	30.132	ENSPNYG00000002652	-	76	30.132	Pundamilia_nyererei
ENSORLG00000028454	-	94	37.037	ENSPNYG00000023697	-	69	37.037	Pundamilia_nyererei
ENSORLG00000028454	-	90	42.606	ENSPNYG00000002466	-	94	42.606	Pundamilia_nyererei
ENSORLG00000028454	-	97	40.196	ENSPNAG00000024749	-	72	40.196	Pygocentrus_nattereri
ENSORLG00000028454	-	94	30.640	ENSPNAG00000024211	-	62	30.640	Pygocentrus_nattereri
ENSORLG00000028454	-	78	50.000	ENSPNAG00000014375	-	60	50.000	Pygocentrus_nattereri
ENSORLG00000028454	-	89	40.143	ENSPNAG00000010342	-	89	40.143	Pygocentrus_nattereri
ENSORLG00000028454	-	99	42.675	ENSPNAG00000002786	-	76	42.675	Pygocentrus_nattereri
ENSORLG00000028454	-	88	42.086	ENSSMAG00000014015	-	61	42.086	Scophthalmus_maximus
ENSORLG00000028454	-	83	33.083	ENSSDUG00000017945	-	78	32.374	Seriola_dumerili
ENSORLG00000028454	-	89	46.099	ENSSDUG00000021791	-	94	46.099	Seriola_dumerili
ENSORLG00000028454	-	95	38.284	ENSSDUG00000015364	-	64	38.284	Seriola_dumerili
ENSORLG00000028454	-	97	39.474	ENSSLDG00000006955	-	71	39.474	Seriola_lalandi_dorsalis
ENSORLG00000028454	-	96	43.934	ENSSPUG00000015446	-	68	43.934	Sphenodon_punctatus
ENSORLG00000028454	-	98	34.194	ENSSPAG00000012089	-	84	34.194	Stegastes_partitus
ENSORLG00000028454	-	95	33.225	ENSSPAG00000009351	-	53	33.876	Stegastes_partitus
ENSORLG00000028454	-	96	44.984	ENSSPAG00000000151	-	67	44.984	Stegastes_partitus
ENSORLG00000028454	-	92	42.612	ENSXCOG00000016894	-	86	42.612	Xiphophorus_couchianus
ENSORLG00000028454	-	97	36.422	ENSXMAG00000023211	-	68	36.422	Xiphophorus_maculatus
ENSORLG00000028454	-	91	44.599	ENSXMAG00000026184	-	96	44.599	Xiphophorus_maculatus