EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028457 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 6730 bases
Position: chr13:28058886-28065615
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000040674	zf-C2H2	PF00096.26	5.7e-12	1	3
ENSORLP00000040674	zf-C2H2	PF00096.26	5.7e-12	2	3
ENSORLP00000040674	zf-C2H2	PF00096.26	5.7e-12	3	3
ENSORLP00000044819	zf-C2H2	PF00096.26	2.1e-11	1	3
ENSORLP00000044819	zf-C2H2	PF00096.26	2.1e-11	2	3
ENSORLP00000044819	zf-C2H2	PF00096.26	2.1e-11	3	3
ENSORLP00000044819	zf-met	PF12874.7	5.2e-06	1	1
ENSORLP00000040674	zf-met	PF12874.7	6.1e-05	1	2
ENSORLP00000040674	zf-met	PF12874.7	6.1e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000036087	-	456	-	ENSORLP00000040674	151 (aa)	-	-
ENSORLT00000031989	-	306	-	ENSORLP00000044819	101 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028457	-	90	54.167	ENSORLG00000012472	znf319b	82	54.167
ENSORLG00000028457	-	96	69.444	ENSORLG00000028456	-	82	69.444
ENSORLG00000028457	-	87	51.471	ENSORLG00000024896	-	62	51.471
ENSORLG00000028457	-	87	44.872	ENSORLG00000023133	-	67	49.020
ENSORLG00000028457	-	94	72.449	ENSORLG00000027303	-	68	72.449
ENSORLG00000028457	-	98	48.684	ENSORLG00000027967	-	91	47.475
ENSORLG00000028457	-	87	55.072	ENSORLG00000024183	-	71	50.000
ENSORLG00000028457	-	82	58.000	ENSORLG00000000076	ZNF319	63	58.000
ENSORLG00000028457	-	95	58.416	ENSORLG00000027009	-	85	58.416
ENSORLG00000028457	-	95	69.307	ENSORLG00000022699	-	93	69.307
ENSORLG00000028457	-	95	58.537	ENSORLG00000002307	-	97	55.102
ENSORLG00000028457	-	97	50.000	ENSORLG00000023828	-	52	59.184
ENSORLG00000028457	-	87	46.154	ENSORLG00000027765	-	71	48.980
ENSORLG00000028457	-	97	54.430	ENSORLG00000027767	-	70	54.430
ENSORLG00000028457	-	87	51.136	ENSORLG00000016247	prdm5	63	50.495
ENSORLG00000028457	-	99	66.000	ENSORLG00000025080	-	91	66.000
ENSORLG00000028457	-	96	42.424	ENSORLG00000012610	znf710b	51	42.424
ENSORLG00000028457	-	95	67.327	ENSORLG00000027366	-	73	67.327
ENSORLG00000028457	-	97	46.575	ENSORLG00000022502	-	84	46.575
ENSORLG00000028457	-	91	43.548	ENSORLG00000025651	scrt1b	64	43.548
ENSORLG00000028457	-	90	54.545	ENSORLG00000006966	-	95	55.340
ENSORLG00000028457	-	94	71.264	ENSORLG00000029896	-	85	71.264
ENSORLG00000028457	-	96	51.000	ENSORLG00000028091	-	96	51.000
ENSORLG00000028457	-	94	73.171	ENSORLG00000000247	-	85	73.171
ENSORLG00000028457	-	96	73.737	ENSORLG00000027974	-	83	73.737
ENSORLG00000028457	-	96	72.222	ENSORLG00000028433	-	94	70.000
ENSORLG00000028457	-	87	71.622	ENSORLG00000000197	-	82	71.622
ENSORLG00000028457	-	87	55.128	ENSORLG00000025621	-	93	62.651
ENSORLG00000028457	-	95	70.513	ENSORLG00000023086	-	96	71.000
ENSORLG00000028457	-	94	67.347	ENSORLG00000030610	-	71	67.347
ENSORLG00000028457	-	87	71.605	ENSORLG00000000253	-	98	71.605
ENSORLG00000028457	-	99	56.311	ENSORLG00000012434	znf1064	67	56.311
ENSORLG00000028457	-	95	60.870	ENSORLG00000007009	-	99	60.204
ENSORLG00000028457	-	96	38.202	ENSORLG00000009152	zbtb41	59	38.462
ENSORLG00000028457	-	87	64.706	ENSORLG00000026684	-	89	69.697
ENSORLG00000028457	-	96	71.134	ENSORLG00000021951	-	89	71.134
ENSORLG00000028457	-	87	60.000	ENSORLG00000007032	-	88	60.606
ENSORLG00000028457	-	94	72.414	ENSORLG00000027822	-	99	67.677
ENSORLG00000028457	-	86	59.184	ENSORLG00000029343	-	73	49.398
ENSORLG00000028457	-	95	56.122	ENSORLG00000007097	-	98	56.436
ENSORLG00000028457	-	74	50.685	ENSORLG00000017475	snai2	58	46.939
ENSORLG00000028457	-	95	59.155	ENSORLG00000025380	-	76	59.155
ENSORLG00000028457	-	89	75.000	ENSORLG00000029814	-	85	75.000
ENSORLG00000028457	-	97	74.000	ENSORLG00000027982	-	99	68.000
ENSORLG00000028457	-	87	71.429	ENSORLG00000000262	-	89	72.449
ENSORLG00000028457	-	94	72.727	ENSORLG00000029172	-	75	72.727
ENSORLG00000028457	-	96	74.000	ENSORLG00000024174	-	84	72.727
ENSORLG00000028457	-	87	51.250	ENSORLG00000023094	-	53	51.250
ENSORLG00000028457	-	85	48.000	ENSORLG00000028028	-	50	47.312
ENSORLG00000028457	-	89	47.525	ENSORLG00000024789	-	72	47.525
ENSORLG00000028457	-	96	67.021	ENSORLG00000029493	-	65	67.021
ENSORLG00000028457	-	99	48.529	ENSORLG00000002268	-	85	48.529
ENSORLG00000028457	-	96	68.966	ENSORLG00000023744	-	98	68.966
ENSORLG00000028457	-	91	73.000	ENSORLG00000000420	-	94	73.000
ENSORLG00000028457	-	91	71.717	ENSORLG00000029027	-	92	71.717
ENSORLG00000028457	-	94	70.103	ENSORLG00000025717	-	94	70.103
ENSORLG00000028457	-	78	57.955	ENSORLG00000030655	-	69	57.955
ENSORLG00000028457	-	72	41.176	ENSORLG00000028851	-	65	41.176
ENSORLG00000028457	-	99	72.000	ENSORLG00000026852	-	86	72.000
ENSORLG00000028457	-	96	69.000	ENSORLG00000026520	-	93	69.000
ENSORLG00000028457	-	85	52.055	ENSORLG00000026568	-	51	52.055
ENSORLG00000028457	-	87	69.355	ENSORLG00000001796	-	88	69.355
ENSORLG00000028457	-	96	68.687	ENSORLG00000026811	-	89	68.687
ENSORLG00000028457	-	81	48.052	ENSORLG00000027418	-	51	44.681
ENSORLG00000028457	-	95	71.717	ENSORLG00000023497	-	78	71.717
ENSORLG00000028457	-	87	72.222	ENSORLG00000027271	-	93	70.000
ENSORLG00000028457	-	91	75.758	ENSORLG00000023806	-	94	74.359
ENSORLG00000028457	-	92	59.184	ENSORLG00000011040	-	91	59.184
ENSORLG00000028457	-	87	48.750	ENSORLG00000010117	-	67	48.750
ENSORLG00000028457	-	94	71.717	ENSORLG00000001749	-	97	69.697
ENSORLG00000028457	-	97	65.306	ENSORLG00000025576	-	99	65.306
ENSORLG00000028457	-	100	63.918	ENSORLG00000028323	-	95	65.079
ENSORLG00000028457	-	87	57.143	ENSORLG00000022350	-	64	57.143
ENSORLG00000028457	-	99	55.446	ENSORLG00000012485	-	80	56.000
ENSORLG00000028457	-	90	70.707	ENSORLG00000022677	-	71	70.707
ENSORLG00000028457	-	99	46.250	ENSORLG00000029270	-	74	46.667
ENSORLG00000028457	-	92	57.353	ENSORLG00000013863	-	99	54.545
ENSORLG00000028457	-	95	46.591	ENSORLG00000001615	-	75	50.633
ENSORLG00000028457	-	87	66.038	ENSORLG00000000191	-	88	71.429
ENSORLG00000028457	-	95	76.404	ENSORLG00000023809	-	87	76.404
ENSORLG00000028457	-	98	71.000	ENSORLG00000027575	-	88	71.000
ENSORLG00000028457	-	79	48.485	ENSORLG00000016981	-	65	50.000
ENSORLG00000028457	-	95	69.697	ENSORLG00000028381	-	92	69.697
ENSORLG00000028457	-	93	57.895	ENSORLG00000025702	-	89	57.895
ENSORLG00000028457	-	87	57.500	ENSORLG00000029994	-	86	58.824
ENSORLG00000028457	-	98	48.780	ENSORLG00000007263	-	73	52.475
ENSORLG00000028457	-	73	45.205	ENSORLG00000009246	-	52	39.640
ENSORLG00000028457	-	94	80.556	ENSORLG00000025540	-	69	64.000
ENSORLG00000028457	-	87	59.615	ENSORLG00000021885	-	73	59.615
ENSORLG00000028457	-	98	74.747	ENSORLG00000024652	-	99	72.727
ENSORLG00000028457	-	95	64.179	ENSORLG00000028168	-	92	64.286
ENSORLG00000028457	-	96	67.816	ENSORLG00000024194	-	51	67.816
ENSORLG00000028457	-	95	72.165	ENSORLG00000027186	-	94	72.165
ENSORLG00000028457	-	97	69.355	ENSORLG00000028567	-	98	70.652
ENSORLG00000028457	-	97	72.727	ENSORLG00000030630	-	95	73.000
ENSORLG00000028457	-	90	48.485	ENSORLG00000022704	-	64	48.485
ENSORLG00000028457	-	77	37.234	ENSORLG00000029440	-	75	37.234
ENSORLG00000028457	-	89	55.738	ENSORLG00000028391	-	82	55.738
ENSORLG00000028457	-	94	80.556	ENSORLG00000027053	-	69	64.000
ENSORLG00000028457	-	96	68.367	ENSORLG00000000557	-	94	68.367
ENSORLG00000028457	-	99	50.685	ENSORLG00000025719	-	64	51.190
ENSORLG00000028457	-	87	75.676	ENSORLG00000026191	-	97	79.518
ENSORLG00000028457	-	95	68.367	ENSORLG00000024399	-	90	68.367
ENSORLG00000028457	-	94	70.238	ENSORLG00000026432	-	70	70.238
ENSORLG00000028457	-	97	64.286	ENSORLG00000022187	-	71	64.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028457	-	91	49.000	ENSEBUG00000010204	-	78	49.000	Eptatretus_burgeri
ENSORLG00000028457	-	87	53.704	ENSEBUG00000014042	-	54	53.704	Eptatretus_burgeri
ENSORLG00000028457	-	87	55.128	ENSEBUG00000011730	-	53	51.190	Eptatretus_burgeri
ENSORLG00000028457	-	86	52.632	ENSEBUG00000012314	-	61	55.769	Eptatretus_burgeri
ENSORLG00000028457	-	91	49.505	ENSGAFG00000014563	-	63	49.505	Gambusia_affinis
ENSORLG00000028457	-	98	52.874	ENSHBUG00000009941	-	78	52.874	Haplochromis_burtoni
ENSORLG00000028457	-	78	52.174	ENSKMAG00000019180	-	53	52.174	Kryptolebias_marmoratus
ENSORLG00000028457	-	86	48.052	ENSLOCG00000018285	-	98	60.465	Lepisosteus_oculatus
ENSORLG00000028457	-	86	55.319	ENSMMOG00000011435	-	71	55.319	Mola_mola
ENSORLG00000028457	-	80	46.296	ENSORLG00020006820	-	58	48.611	Oryzias_latipes_hni
ENSORLG00000028457	-	91	49.505	ENSPREG00000016593	-	54	49.505	Poecilia_reticulata
ENSORLG00000028457	-	95	56.944	ENSPREG00000004746	-	55	56.944	Poecilia_reticulata
ENSORLG00000028457	-	76	52.083	ENSPREG00000003532	-	94	52.083	Poecilia_reticulata
ENSORLG00000028457	-	87	50.725	ENSPNYG00000011973	-	97	52.874	Pundamilia_nyererei
ENSORLG00000028457	-	85	51.724	ENSPNYG00000006306	-	100	57.143	Pundamilia_nyererei
ENSORLG00000028457	-	89	51.562	ENSPNAG00000015513	si:dkey-210j14.3	95	52.000	Pygocentrus_nattereri
ENSORLG00000028457	-	66	68.293	ENSXCOG00000016589	-	100	68.293	Xiphophorus_couchianus
ENSORLG00000028457	-	87	50.649	ENSXCOG00000010950	si:dkey-210j14.3	51	50.980	Xiphophorus_couchianus
ENSORLG00000028457	-	87	55.072	ENSXMAG00000022137	-	82	59.615	Xiphophorus_maculatus