EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028483 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6934 bases
Position: chr16:7719237-7726170
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043734	zf-CCHC	PF00098.23	2.8e-08	1	2
ENSORLP00000043734	zf-CCHC	PF00098.23	2.8e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000034615	-	1119	-	ENSORLP00000043734	372 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028483	-	57	97.156	ENSORLG00000026795	-	52	97.156
ENSORLG00000028483	-	71	79.924	ENSORLG00000026580	-	62	79.924

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028483	-	76	50.350	ENSCVAG00000007715	-	60	50.526	Cyprinodon_variegatus
ENSORLG00000028483	-	67	53.755	ENSELUG00000019965	-	85	52.060	Esox_lucius
ENSORLG00000028483	-	63	49.367	ENSELUG00000010330	-	75	48.571	Esox_lucius
ENSORLG00000028483	-	75	82.437	ENSORLG00020022501	-	56	82.437	Oryzias_latipes_hni
ENSORLG00000028483	-	62	76.957	ENSOMEG00000008410	-	54	76.957	Oryzias_melastigma
ENSORLG00000028483	-	71	62.687	ENSOMEG00000015727	-	68	62.687	Oryzias_melastigma
ENSORLG00000028483	-	58	37.900	ENSPKIG00000023306	-	52	38.426	Paramormyrops_kingsleyae
ENSORLG00000028483	-	54	62.376	ENSPREG00000013158	-	57	62.376	Poecilia_reticulata
ENSORLG00000028483	-	72	53.103	ENSSDUG00000014810	-	59	51.961	Seriola_dumerili
ENSORLG00000028483	-	63	59.494	ENSSLDG00000008028	-	51	56.489	Seriola_lalandi_dorsalis
ENSORLG00000028483	-	57	61.860	ENSXMAG00000022338	-	62	54.440	Xiphophorus_maculatus
ENSORLG00000028483	-	57	61.860	ENSXMAG00000028949	-	62	54.440	Xiphophorus_maculatus