EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000028497 (Gene tree)
Gene ID: 101174350
Gene Symbol: gpatch8
Alias: -
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 30654 bases
Position: chr8:6917780-6948433
Accession: 101174350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000031940	zf-C2H2_jaz	PF12171.8	5.7e-06	1	1
ENSORLP00000038935	zf-C2H2_jaz	PF12171.8	5.8e-06	1	1
ENSORLP00000038398	zf-C2H2_jaz	PF12171.8	6e-06	1	1
ENSORLP00000031442	zf-C2H2_jaz	PF12171.8	6e-06	1	1
ENSORLP00000026559	zf-C2H2_jaz	PF12171.8	6.1e-06	1	1
ENSORLP00000038398	G-patch	PF01585.23	5.7e-13	1	1
ENSORLP00000031442	G-patch	PF01585.23	5.8e-13	1	1
ENSORLP00000026559	G-patch	PF01585.23	5.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040630	-	9339	-	ENSORLP00000031442	1481 (aa)	-	-
ENSORLT00000028408	-	9312	XM_020705175	ENSORLP00000038935	1432 (aa)	XP_020560834	UPI0005CBE608
ENSORLT00000043750	-	9300	XM_020705178	ENSORLP00000031940	1416 (aa)	XP_020560837	UPI0005CC344E
ENSORLT00000037880	-	9318	-	ENSORLP00000038398	1474 (aa)	-	-
ENSORLT00000037740	-	9870	XM_004071580	ENSORLP00000026559	1495 (aa)	XP_004071628	UPI0002A4C2C6

Gene Model

Click here to download ENSORLG00000028497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028497	gpatch8	100	82.247	ENSAPOG00000023938	gpatch8	56	78.478	Acanthochromis_polyacanthus
ENSORLG00000028497	gpatch8	100	81.981	ENSAOCG00000018102	gpatch8	56	78.002	Amphiprion_ocellaris
ENSORLG00000028497	gpatch8	100	81.848	ENSAPEG00000016776	gpatch8	56	77.765	Amphiprion_percula
ENSORLG00000028497	gpatch8	61	73.649	ENSATEG00000003247	gpatch8	56	72.005	Anabas_testudineus
ENSORLG00000028497	gpatch8	100	79.535	ENSACLG00000004165	gpatch8	56	74.703	Astatotilapia_calliptera
ENSORLG00000028497	gpatch8	56	69.011	ENSCSEG00000021277	gpatch8	56	69.149	Cynoglossus_semilaevis
ENSORLG00000028497	gpatch8	56	74.374	ENSCVAG00000013477	gpatch8	61	75.896	Cyprinodon_variegatus
ENSORLG00000028497	gpatch8	100	61.578	ENSDARG00000059768	gpatch8	56	58.514	Danio_rerio
ENSORLG00000028497	gpatch8	100	63.421	ENSELUG00000019920	gpatch8	57	62.002	Esox_lucius
ENSORLG00000028497	gpatch8	56	71.667	ENSFHEG00000005791	gpatch8	56	72.479	Fundulus_heteroclitus
ENSORLG00000028497	gpatch8	56	74.880	ENSGAFG00000018138	gpatch8	61	76.471	Gambusia_affinis
ENSORLG00000028497	gpatch8	100	79.244	ENSHBUG00000002669	gpatch8	56	74.911	Haplochromis_burtoni
ENSORLG00000028497	gpatch8	79	55.130	ENSHGLG00100010738	GPATCH8	66	61.157	Heterocephalus_glaber_male
ENSORLG00000028497	gpatch8	61	70.065	ENSHCOG00000017518	gpatch8	56	69.002	Hippocampus_comes
ENSORLG00000028497	gpatch8	61	60.087	ENSIPUG00000015431	gpatch8	55	61.954	Ictalurus_punctatus
ENSORLG00000028497	gpatch8	56	75.986	ENSKMAG00000018364	gpatch8	56	76.758	Kryptolebias_marmoratus
ENSORLG00000028497	gpatch8	100	78.065	ENSLBEG00000023352	gpatch8	56	72.544	Labrus_bergylta
ENSORLG00000028497	gpatch8	61	80.172	ENSLOCG00000012265	gpatch8	72	75.177	Lepisosteus_oculatus
ENSORLG00000028497	gpatch8	100	78.556	ENSMAMG00000001618	gpatch8	60	73.667	Mastacembelus_armatus
ENSORLG00000028497	gpatch8	100	79.867	ENSMZEG00005022584	gpatch8	56	74.822	Maylandia_zebra
ENSORLG00000028497	gpatch8	61	75.488	ENSMMOG00000020472	gpatch8	59	74.025	Mola_mola
ENSORLG00000028497	gpatch8	100	77.563	ENSMALG00000004204	gpatch8	100	77.896	Monopterus_albus
ENSORLG00000028497	gpatch8	100	79.775	ENSNBRG00000016402	gpatch8	99	79.169	Neolamprologus_brichardi
ENSORLG00000028497	gpatch8	100	76.892	ENSONIG00000001292	gpatch8	55	70.261	Oreochromis_niloticus
ENSORLG00000028497	gpatch8	100	98.662	ENSORLG00020006656	gpatch8	100	98.662	Oryzias_latipes_hni
ENSORLG00000028497	gpatch8	100	99.331	ENSORLG00015019797	gpatch8	100	99.331	Oryzias_latipes_hsok
ENSORLG00000028497	gpatch8	61	52.593	ENSPKIG00000018753	gpatch8	56	53.998	Paramormyrops_kingsleyae
ENSORLG00000028497	gpatch8	53	54.756	ENSPKIG00000004860	GPATCH8	51	56.810	Paramormyrops_kingsleyae
ENSORLG00000028497	gpatch8	100	73.635	ENSPMGG00000000730	gpatch8	60	67.347	Periophthalmus_magnuspinnatus
ENSORLG00000028497	gpatch8	56	74.940	ENSPFOG00000014833	gpatch8	61	76.739	Poecilia_formosa
ENSORLG00000028497	gpatch8	56	74.940	ENSPLAG00000001035	gpatch8	61	76.739	Poecilia_latipinna
ENSORLG00000028497	gpatch8	56	75.060	ENSPMEG00000024032	gpatch8	61	76.848	Poecilia_mexicana
ENSORLG00000028497	gpatch8	56	74.700	ENSPREG00000008911	gpatch8	100	77.809	Poecilia_reticulata
ENSORLG00000028497	gpatch8	100	79.203	ENSPNYG00000009426	gpatch8	95	77.980	Pundamilia_nyererei
ENSORLG00000028497	gpatch8	59	60.642	ENSPNAG00000016200	gpatch8	58	62.710	Pygocentrus_nattereri
ENSORLG00000028497	gpatch8	54	57.421	ENSSFOG00015004299	GPATCH8	53	57.888	Scleropages_formosus
ENSORLG00000028497	gpatch8	100	80.690	ENSSLDG00000009225	gpatch8	61	78.067	Seriola_lalandi_dorsalis
ENSORLG00000028497	gpatch8	100	81.715	ENSSPAG00000011368	gpatch8	61	79.479	Stegastes_partitus
ENSORLG00000028497	gpatch8	61	68.723	ENSTRUG00000020474	gpatch8	59	67.001	Takifugu_rubripes
ENSORLG00000028497	gpatch8	58	59.170	ENSTBEG00000009486	GPATCH8	55	62.548	Tupaia_belangeri
ENSORLG00000028497	gpatch8	56	74.522	ENSXMAG00000009217	gpatch8	61	76.247	Xiphophorus_maculatus