EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028523 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 2814 bases
Position: chr21:19562563-19565376
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000039069	RVT_1	PF00078.27	9.9e-42	1	1
ENSORLP00000039069	Exo_endo_phos	PF03372.23	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029096	-	2814	-	ENSORLP00000039069	937 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028523	-	100	98.826	ENSORLG00000024474	-	100	98.826
ENSORLG00000028523	-	100	99.360	ENSORLG00000030323	-	100	99.360
ENSORLG00000028523	-	91	98.828	ENSORLG00000028578	-	99	98.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028523	-	99	55.213	ENSACLG00000027274	-	99	55.213	Astatotilapia_calliptera
ENSORLG00000028523	-	99	55.841	ENSACLG00000015125	-	99	55.841	Astatotilapia_calliptera
ENSORLG00000028523	-	100	98.826	ENSORLG00020011607	-	100	98.826	Oryzias_latipes_hni