EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3726 bases
Position: chr7:26712747-26716472
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000037314	RVT_1	PF00078.27	7.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000028663	-	3726	-	ENSORLP00000037314	1241 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028539	-	86	51.495	ENSORLG00000026865	-	99	51.495
ENSORLG00000028539	-	100	99.355	ENSORLG00000025257	-	100	99.355
ENSORLG00000028539	-	99	38.764	ENSORLG00000027203	-	99	38.764
ENSORLG00000028539	-	55	31.557	ENSORLG00000023575	-	87	31.557
ENSORLG00000028539	-	99	38.925	ENSORLG00000027038	-	99	38.925
ENSORLG00000028539	-	100	98.550	ENSORLG00000028184	-	100	98.550
ENSORLG00000028539	-	73	41.273	ENSORLG00000028372	-	94	41.273
ENSORLG00000028539	-	61	30.916	ENSORLG00000028121	-	88	30.916
ENSORLG00000028539	-	88	55.404	ENSORLG00000027119	-	99	55.404
ENSORLG00000028539	-	80	30.212	ENSORLG00000028439	-	98	30.212
ENSORLG00000028539	-	77	45.121	ENSORLG00000028041	-	99	45.121
ENSORLG00000028539	-	99	43.604	ENSORLG00000027382	-	99	43.604
ENSORLG00000028539	-	55	31.513	ENSORLG00000025260	-	87	31.513
ENSORLG00000028539	-	99	40.480	ENSORLG00000021884	-	98	40.480
ENSORLG00000028539	-	62	31.144	ENSORLG00000029308	-	87	31.144
ENSORLG00000028539	-	61	31.043	ENSORLG00000025323	-	88	31.043
ENSORLG00000028539	-	66	40.342	ENSORLG00000026021	-	99	40.547
ENSORLG00000028539	-	66	31.678	ENSORLG00000028313	-	98	31.678
ENSORLG00000028539	-	79	40.181	ENSORLG00000030108	-	97	40.181
ENSORLG00000028539	-	99	40.386	ENSORLG00000022718	-	99	40.386
ENSORLG00000028539	-	99	40.320	ENSORLG00000024361	-	99	40.320
ENSORLG00000028539	-	99	52.055	ENSORLG00000027316	-	99	52.055
ENSORLG00000028539	-	94	51.404	ENSORLG00000030600	-	99	51.404
ENSORLG00000028539	-	61	31.298	ENSORLG00000025901	-	93	31.298
ENSORLG00000028539	-	88	38.490	ENSORLG00000022810	-	99	38.490
ENSORLG00000028539	-	51	31.240	ENSORLG00000024972	-	69	31.240
ENSORLG00000028539	-	74	44.099	ENSORLG00000024817	-	99	44.099
ENSORLG00000028539	-	99	40.113	ENSORLG00000022021	-	98	40.113

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028539	-	87	51.045	ENSACLG00000005544	-	99	51.045	Astatotilapia_calliptera
ENSORLG00000028539	-	98	38.499	ENSACLG00000014667	-	98	38.499	Astatotilapia_calliptera
ENSORLG00000028539	-	93	54.553	ENSACLG00000016372	-	99	54.553	Astatotilapia_calliptera
ENSORLG00000028539	-	96	39.835	ENSACLG00000006792	-	99	39.835	Astatotilapia_calliptera
ENSORLG00000028539	-	93	38.058	ENSAMXG00000030338	-	99	38.058	Astyanax_mexicanus
ENSORLG00000028539	-	99	41.424	ENSDARG00000103976	BX544877.1	99	41.424	Danio_rerio
ENSORLG00000028539	-	100	55.547	ENSDARG00000100925	CU104709.1	99	55.547	Danio_rerio
ENSORLG00000028539	-	99	41.511	ENSDARG00000103841	CU024870.1	99	41.511	Danio_rerio
ENSORLG00000028539	-	99	41.167	ENSDARG00000105300	BX927081.1	99	41.167	Danio_rerio
ENSORLG00000028539	-	99	42.203	ENSDARG00000100234	BX511246.1	99	42.203	Danio_rerio
ENSORLG00000028539	-	99	42.122	ENSDARG00000099710	BX284696.1	99	42.122	Danio_rerio
ENSORLG00000028539	-	77	42.575	ENSDARG00000098557	BX323564.1	99	42.575	Danio_rerio
ENSORLG00000028539	-	62	44.273	ENSDARG00000100538	si:dkeyp-88h4.2	99	44.273	Danio_rerio
ENSORLG00000028539	-	96	39.850	ENSKMAG00000014582	-	97	39.850	Kryptolebias_marmoratus
ENSORLG00000028539	-	76	57.463	ENSKMAG00000018235	-	100	57.463	Kryptolebias_marmoratus
ENSORLG00000028539	-	99	52.974	ENSKMAG00000011717	-	99	52.974	Kryptolebias_marmoratus
ENSORLG00000028539	-	54	37.700	ENSMZEG00005001249	-	98	37.700	Maylandia_zebra
ENSORLG00000028539	-	67	42.568	ENSONIG00000020693	-	100	42.568	Oreochromis_niloticus
ENSORLG00000028539	-	63	44.459	ENSORLG00020013755	-	99	44.459	Oryzias_latipes_hni
ENSORLG00000028539	-	82	47.394	ENSORLG00020021337	-	99	47.394	Oryzias_latipes_hni
ENSORLG00000028539	-	66	45.138	ENSORLG00020007542	-	99	45.138	Oryzias_latipes_hni
ENSORLG00000028539	-	55	98.233	ENSORLG00020004920	-	100	98.233	Oryzias_latipes_hni
ENSORLG00000028539	-	88	51.557	ENSORLG00020008557	-	99	51.557	Oryzias_latipes_hni
ENSORLG00000028539	-	74	45.887	ENSORLG00020016067	-	99	45.887	Oryzias_latipes_hni
ENSORLG00000028539	-	99	52.377	ENSORLG00020016870	-	99	52.297	Oryzias_latipes_hni
ENSORLG00000028539	-	55	45.668	ENSORLG00020007503	-	99	45.668	Oryzias_latipes_hni
ENSORLG00000028539	-	52	52.074	ENSORLG00020010329	-	100	52.074	Oryzias_latipes_hni
ENSORLG00000028539	-	72	56.775	ENSORLG00020006818	-	99	56.775	Oryzias_latipes_hni
ENSORLG00000028539	-	72	56.999	ENSORLG00020021090	-	99	56.999	Oryzias_latipes_hni
ENSORLG00000028539	-	63	44.473	ENSORLG00020013618	-	99	44.473	Oryzias_latipes_hni
ENSORLG00000028539	-	80	51.919	ENSORLG00020018783	-	99	51.919	Oryzias_latipes_hni
ENSORLG00000028539	-	62	42.802	ENSORLG00020008765	-	98	42.802	Oryzias_latipes_hni
ENSORLG00000028539	-	99	40.000	ENSORLG00015007330	-	99	40.194	Oryzias_latipes_hsok
ENSORLG00000028539	-	61	54.101	ENSORLG00015007293	-	100	54.101	Oryzias_latipes_hsok
ENSORLG00000028539	-	67	42.413	ENSORLG00015021204	-	99	42.413	Oryzias_latipes_hsok
ENSORLG00000028539	-	78	44.239	ENSORLG00015019437	-	99	44.239	Oryzias_latipes_hsok
ENSORLG00000028539	-	99	38.358	ENSORLG00015014452	-	99	38.792	Oryzias_latipes_hsok
ENSORLG00000028539	-	52	41.654	ENSORLG00015001172	-	99	41.654	Oryzias_latipes_hsok
ENSORLG00000028539	-	99	40.467	ENSORLG00015019816	-	98	40.467	Oryzias_latipes_hsok
ENSORLG00000028539	-	53	52.932	ENSOMEG00000003087	-	100	52.932	Oryzias_melastigma
ENSORLG00000028539	-	59	41.610	ENSOMEG00000003915	-	99	41.610	Oryzias_melastigma
ENSORLG00000028539	-	85	40.866	ENSOMEG00000021029	-	98	40.866	Oryzias_melastigma
ENSORLG00000028539	-	88	44.180	ENSOMEG00000015408	-	99	44.180	Oryzias_melastigma
ENSORLG00000028539	-	84	52.662	ENSPKIG00000020531	-	99	52.662	Paramormyrops_kingsleyae
ENSORLG00000028539	-	52	51.553	ENSPFOG00000023623	-	100	51.553	Poecilia_formosa
ENSORLG00000028539	-	65	50.000	ENSPFOG00000013154	-	100	50.000	Poecilia_formosa
ENSORLG00000028539	-	88	54.792	ENSXMAG00000026019	-	99	54.792	Xiphophorus_maculatus
ENSORLG00000028539	-	77	56.100	ENSXMAG00000022515	-	99	56.100	Xiphophorus_maculatus
ENSORLG00000028539	-	90	46.756	ENSXMAG00000024671	-	99	46.778	Xiphophorus_maculatus