EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000028655 (Gene tree)
Gene ID
101171279
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Plus strand
Length
4578 bases
Position
chr17:10897114-10901691
Accession
101171279
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000043362RRM_1PF00076.222.1e-4212
ENSORLP00000043362RRM_1PF00076.222.1e-4222
ENSORLP00000032380RRM_1PF00076.222.9e-4212
ENSORLP00000032380RRM_1PF00076.222.9e-4222
ENSORLP00000027720RRM_1PF00076.222.9e-4212
ENSORLP00000027720RRM_1PF00076.222.9e-4222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000038235-1548XM_023965671ENSORLP00000032380515 (aa)XP_023821439-
ENSORLT00000045704-1560-ENSORLP00000027720519 (aa)--
ENSORLT00000038253-1443-ENSORLP00000043362480 (aa)--
Gene Model
Click here to download ENSORLG00000028655's gene model file
Pathways
Pathway IDPathway NameSource
ola03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028655's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000028655-5938.235ENSORLG00000011545u2af2a7240.196
ENSORLG00000028655-9981.503ENSORLG00000012279puf60b9981.503
ENSORLG00000028655-8443.902ENSORLG00000009919-6535.577
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000028655-9978.707ENSG00000179950PUF609978.598Homo_sapiens
ENSORLG00000028655-9982.274ENSAPOG00000001713puf60b9882.115Acanthochromis_polyacanthus
ENSORLG00000028655-9977.143ENSAMEG00000006406PUF609277.040Ailuropoda_melanoleuca
ENSORLG00000028655-9982.081ENSACIG00000021705puf60b9982.081Amphilophus_citrinellus
ENSORLG00000028655-9982.718ENSACIG00000003263-9982.239Amphilophus_citrinellus
ENSORLG00000028655-9987.379ENSAOCG00000015558-9788.155Amphiprion_ocellaris
ENSORLG00000028655-9982.274ENSAOCG00000005395puf60b9982.274Amphiprion_ocellaris
ENSORLG00000028655-9977.912ENSAPEG00000011923puf60b9777.912Amphiprion_percula
ENSORLG00000028655-9981.429ENSAPEG00000001836-9981.633Amphiprion_percula
ENSORLG00000028655-9982.274ENSATEG00000001730puf60b9882.115Anabas_testudineus
ENSORLG00000028655-9988.953ENSATEG00000006303-9888.155Anabas_testudineus
ENSORLG00000028655-9979.087ENSAPLG00000010150PUF609979.087Anas_platyrhynchos
ENSORLG00000028655-9976.909ENSACAG00000001645PUF609677.966Anolis_carolinensis
ENSORLG00000028655-9978.707ENSANAG00000018626PUF609978.598Aotus_nancymaae
ENSORLG00000028655-9982.081ENSACLG00000004462puf60b9982.081Astatotilapia_calliptera
ENSORLG00000028655-9981.404ENSAMXG00000036570puf60a9979.336Astyanax_mexicanus
ENSORLG00000028655-9976.693ENSAMXG00000041030puf60b9976.693Astyanax_mexicanus
ENSORLG00000028655-9979.087ENSBTAG00000037493PUF609878.977Bos_taurus
ENSORLG00000028655-9648.000WBGene00004389rnp-69047.416Caenorhabditis_elegans
ENSORLG00000028655-9978.707ENSCJAG00000021485PUF609778.598Callithrix_jacchus
ENSORLG00000028655-9978.517ENSCAFG00000001400PUF609278.409Canis_familiaris
ENSORLG00000028655-9978.897ENSCAFG00020018754PUF609778.788Canis_lupus_dingo
ENSORLG00000028655-9979.087ENSCHIG00000001618PUF608678.977Capra_hircus
ENSORLG00000028655-9978.897ENSTSYG00000011912PUF609978.788Carlito_syrichta
ENSORLG00000028655-9974.340ENSCPOG00000014613PUF609374.248Cavia_porcellus
ENSORLG00000028655-9978.137ENSCCAG00000007744PUF609778.598Cebus_capucinus
ENSORLG00000028655-9978.707ENSCATG00000035405PUF609778.598Cercocebus_atys
ENSORLG00000028655-9978.897ENSCLAG00000009154PUF609178.788Chinchilla_lanigera
ENSORLG00000028655-9978.707ENSCSAG00000008878PUF609978.598Chlorocebus_sabaeus
ENSORLG00000028655-9978.137ENSCPBG00000005595PUF609778.598Chrysemys_picta_bellii
ENSORLG00000028655-9748.228ENSCING00000008436-9548.141Ciona_intestinalis
ENSORLG00000028655-6261.270ENSCING00000002156-8662.222Ciona_intestinalis
ENSORLG00000028655-9753.668ENSCSAVG00000001385-9953.475Ciona_savignyi
ENSORLG00000028655-9747.495ENSCSAVG00000004765-9748.297Ciona_savignyi
ENSORLG00000028655-8177.804ENSCANG00000041843PUF6010077.674Colobus_angolensis_palliatus
ENSORLG00000028655-9979.278ENSCGRG00001017442Puf609179.278Cricetulus_griseus_chok1gshd
ENSORLG00000028655-9979.278ENSCGRG00000003717Puf609179.278Cricetulus_griseus_crigri
ENSORLG00000028655-9978.295ENSCSEG00000014845-8979.596Cynoglossus_semilaevis
ENSORLG00000028655-9981.888ENSCSEG00000019887puf60b9181.888Cynoglossus_semilaevis
ENSORLG00000028655-8890.708ENSCVAG00000001560-9590.708Cyprinodon_variegatus
ENSORLG00000028655-9981.118ENSCVAG00000009386puf60b9981.310Cyprinodon_variegatus
ENSORLG00000028655-9976.529ENSDARG00000001241puf60b10089.683Danio_rerio
ENSORLG00000028655-9980.880ENSDARG00000032175puf60a10087.815Danio_rerio
ENSORLG00000028655-9766.019ENSDNOG00000043278PUF609065.957Dasypus_novemcinctus
ENSORLG00000028655-9978.897ENSDORG00000004585Puf609378.788Dipodomys_ordii
ENSORLG00000028655-9163.576FBgn0028577hfp8360.000Drosophila_melanogaster
ENSORLG00000028655-9766.324ENSEBUG00000005470-8865.708Eptatretus_burgeri
ENSORLG00000028655-9958.545ENSEBUG00000014291puf60b8460.811Eptatretus_burgeri
ENSORLG00000028655-9978.897ENSEASG00005009695PUF609778.788Equus_asinus_asinus
ENSORLG00000028655-9978.897ENSECAG00000024681PUF609678.788Equus_caballus
ENSORLG00000028655-9980.414ENSELUG00000006507puf60b9978.000Esox_lucius
ENSORLG00000028655-9983.525ENSELUG00000018443-9883.525Esox_lucius
ENSORLG00000028655-9979.087ENSFCAG00000001045PUF609978.977Felis_catus
ENSORLG00000028655-9970.152ENSFALG00000001136PUF609770.510Ficedula_albicollis
ENSORLG00000028655-9979.087ENSFDAG00000017177PUF609178.977Fukomys_damarensis
ENSORLG00000028655-9981.888ENSFHEG00000020046puf60b9982.081Fundulus_heteroclitus
ENSORLG00000028655-9589.775ENSFHEG00000021687PUF609990.625Fundulus_heteroclitus
ENSORLG00000028655-9968.702ENSGMOG00000006392puf60b9968.571Gadus_morhua
ENSORLG00000028655-6681.948ENSGALG00000039901PUF609481.948Gallus_gallus
ENSORLG00000028655-9985.921ENSGAFG00000004334-10085.331Gambusia_affinis
ENSORLG00000028655-9981.888ENSGAFG00000021040puf60b9982.081Gambusia_affinis
ENSORLG00000028655-9970.250ENSGACG00000004717puf60b9769.615Gasterosteus_aculeatus
ENSORLG00000028655-9875.889ENSGACG00000001484-9875.348Gasterosteus_aculeatus
ENSORLG00000028655-9978.137ENSGAGG00000013289PUF609178.598Gopherus_agassizii
ENSORLG00000028655-9978.707ENSGGOG00000004646PUF609778.598Gorilla_gorilla
ENSORLG00000028655-9988.350ENSHBUG00000009634-9888.350Haplochromis_burtoni
ENSORLG00000028655-9982.081ENSHBUG00000015118puf60b9982.081Haplochromis_burtoni
ENSORLG00000028655-9979.087ENSHGLG00000006111PUF609178.977Heterocephalus_glaber_female
ENSORLG00000028655-9979.087ENSHGLG00100012362PUF609178.977Heterocephalus_glaber_male
ENSORLG00000028655-9771.287ENSHCOG00000000378-9969.943Hippocampus_comes
ENSORLG00000028655-9977.654ENSHCOG00000015541puf60b9979.182Hippocampus_comes
ENSORLG00000028655-9980.614ENSIPUG00000002453puf60a9980.614Ictalurus_punctatus
ENSORLG00000028655-9976.575ENSIPUG00000004660puf60b9975.889Ictalurus_punctatus
ENSORLG00000028655-9978.897ENSSTOG00000025037PUF609278.788Ictidomys_tridecemlineatus
ENSORLG00000028655-9979.087ENSJJAG00000001076Puf609278.977Jaculus_jaculus
ENSORLG00000028655-9984.733ENSKMAG00000010106-9985.305Kryptolebias_marmoratus
ENSORLG00000028655-9982.081ENSKMAG00000016745puf60b9982.274Kryptolebias_marmoratus
ENSORLG00000028655-9980.519ENSLBEG00000012505puf60b9980.519Labrus_bergylta
ENSORLG00000028655-7076.000ENSLACG00000005456PUF609974.185Latimeria_chalumnae
ENSORLG00000028655-9982.759ENSLOCG00000010106puf60b9881.992Lepisosteus_oculatus
ENSORLG00000028655-9977.947ENSLAFG00000022929PUF609377.841Loxodonta_africana
ENSORLG00000028655-9978.707ENSMFAG00000043373PUF609778.598Macaca_fascicularis
ENSORLG00000028655-9978.707ENSMMUG00000013558PUF609778.598Macaca_mulatta
ENSORLG00000028655-9978.707ENSMNEG00000031099PUF609778.598Macaca_nemestrina
ENSORLG00000028655-9978.707ENSMLEG00000040009PUF609978.598Mandrillus_leucophaeus
ENSORLG00000028655-9980.695ENSMAMG00000010394puf60b9978.947Mastacembelus_armatus
ENSORLG00000028655-9990.097ENSMAMG00000019476-9890.097Mastacembelus_armatus
ENSORLG00000028655-9988.155ENSMZEG00005019425-9888.155Maylandia_zebra
ENSORLG00000028655-9982.081ENSMZEG00005018515puf60b9982.081Maylandia_zebra
ENSORLG00000028655-9979.087ENSMGAG00000013070PUF609880.441Meleagris_gallopavo
ENSORLG00000028655-6981.694ENSMAUG00000014267-8881.694Mesocricetus_auratus
ENSORLG00000028655-9563.347ENSMAUG00000018549-9563.618Mesocricetus_auratus
ENSORLG00000028655-9978.897ENSMICG00000012226PUF609878.788Microcebus_murinus
ENSORLG00000028655-9979.087ENSMOCG00000018780Puf609278.977Microtus_ochrogaster
ENSORLG00000028655-9978.378ENSMMOG00000018059-9982.143Mola_mola
ENSORLG00000028655-9982.081ENSMMOG00000004217puf60b9982.081Mola_mola
ENSORLG00000028655-9978.517ENSMODG00000009161PUF609378.409Monodelphis_domestica
ENSORLG00000028655-9988.566ENSMALG00000000200-9887.573Monopterus_albus
ENSORLG00000028655-9975.769ENSMALG00000006797puf60b9775.048Monopterus_albus
ENSORLG00000028655-9979.278MGP_CAROLIEiJ_G0019910Puf609179.167Mus_caroli
ENSORLG00000028655-9979.278ENSMUSG00000002524Puf609179.167Mus_musculus
ENSORLG00000028655-9979.278MGP_PahariEiJ_G0019920Puf609179.167Mus_pahari
ENSORLG00000028655-9979.278MGP_SPRETEiJ_G0020812Puf609179.167Mus_spretus
ENSORLG00000028655-9978.707ENSMPUG00000008137PUF609178.598Mustela_putorius_furo
ENSORLG00000028655-9978.517ENSMLUG00000000238-9278.409Myotis_lucifugus
ENSORLG00000028655-9974.257ENSMLUG00000013032-9774.162Myotis_lucifugus
ENSORLG00000028655-9979.087ENSNGAG00000000712Puf609978.977Nannospalax_galili
ENSORLG00000028655-9988.350ENSNBRG00000017223-9888.350Neolamprologus_brichardi
ENSORLG00000028655-8180.425ENSNBRG00000013047puf60b9780.425Neolamprologus_brichardi
ENSORLG00000028655-9978.707ENSNLEG00000002156PUF609778.598Nomascus_leucogenys
ENSORLG00000028655-7386.879ENSOPRG00000002147PUF607586.622Ochotona_princeps
ENSORLG00000028655-7190.323ENSODEG00000014024-8890.323Octodon_degus
ENSORLG00000028655-9758.300ENSODEG00000015513-9458.383Octodon_degus
ENSORLG00000028655-9982.081ENSONIG00000006247puf60b9781.923Oreochromis_niloticus
ENSORLG00000028655-9988.350ENSONIG00000014030-9788.350Oreochromis_niloticus
ENSORLG00000028655-9765.878ENSOANG00000006962PUF609965.551Ornithorhynchus_anatinus
ENSORLG00000028655-10099.223ENSORLG00020018144-9899.223Oryzias_latipes_hni
ENSORLG00000028655-9981.503ENSORLG00020007333puf609981.503Oryzias_latipes_hni
ENSORLG00000028655-9981.731ENSORLG00015007718puf60b9981.731Oryzias_latipes_hsok
ENSORLG00000028655-10099.029ENSORLG00015016833-9899.029Oryzias_latipes_hsok
ENSORLG00000028655-9981.856ENSOMEG00000001643puf60b9981.856Oryzias_melastigma
ENSORLG00000028655-10094.757ENSOMEG00000022185-9894.369Oryzias_melastigma
ENSORLG00000028655-9978.897ENSOGAG00000006259PUF609278.788Otolemur_garnettii
ENSORLG00000028655-9976.437ENSOARG00000016235PUF609777.524Ovis_aries
ENSORLG00000028655-9978.707ENSPPAG00000029933PUF609778.598Pan_paniscus
ENSORLG00000028655-9979.087ENSPPRG00000003257PUF609978.977Panthera_pardus
ENSORLG00000028655-9977.083ENSPTIG00000009795PUF609876.981Panthera_tigris_altaica
ENSORLG00000028655-9978.707ENSPTRG00000043963-9778.598Pan_troglodytes
ENSORLG00000028655-9978.707ENSPTRG00000020670PUF609778.598Pan_troglodytes
ENSORLG00000028655-9978.707ENSPANG00000021936PUF609778.598Papio_anubis
ENSORLG00000028655-9983.044ENSPKIG00000012204puf60b9983.654Paramormyrops_kingsleyae
ENSORLG00000028655-9982.792ENSPKIG00000004295puf60a10086.842Paramormyrops_kingsleyae
ENSORLG00000028655-9978.517ENSPSIG00000004679PUF609878.220Pelodiscus_sinensis
ENSORLG00000028655-9980.725ENSPMGG00000013444puf60b9980.725Periophthalmus_magnuspinnatus
ENSORLG00000028655-9979.087ENSPEMG00000008820Puf609178.977Peromyscus_maniculatus_bairdii
ENSORLG00000028655-9978.897ENSPCIG00000020270PUF609878.788Phascolarctos_cinereus
ENSORLG00000028655-9981.888ENSPFOG00000019217puf60b9879.960Poecilia_formosa
ENSORLG00000028655-9987.354ENSPFOG00000011118-9787.354Poecilia_formosa
ENSORLG00000028655-9987.549ENSPLAG00000017025-9087.549Poecilia_latipinna
ENSORLG00000028655-9981.888ENSPLAG00000010754puf60b9982.081Poecilia_latipinna
ENSORLG00000028655-9981.888ENSPMEG00000000838puf60b9982.081Poecilia_mexicana
ENSORLG00000028655-9987.743ENSPMEG00000009767-9087.743Poecilia_mexicana
ENSORLG00000028655-9981.557ENSPREG00000005440puf60b9981.762Poecilia_reticulata
ENSORLG00000028655-8176.347ENSPPYG00000018951-9576.224Pongo_abelii
ENSORLG00000028655-8177.804ENSPCAG00000014837PUF6010077.674Procavia_capensis
ENSORLG00000028655-9978.707ENSPCOG00000027981PUF609878.598Propithecus_coquereli
ENSORLG00000028655-9985.366ENSPVAG00000016167PUF608185.366Pteropus_vampyrus
ENSORLG00000028655-9988.155ENSPNYG00000004273-9888.155Pundamilia_nyererei
ENSORLG00000028655-9982.081ENSPNYG00000002556puf60b9982.081Pundamilia_nyererei
ENSORLG00000028655-9979.537ENSPNAG00000019909puf60a9979.800Pygocentrus_nattereri
ENSORLG00000028655-9978.499ENSPNAG00000019415puf60b8977.597Pygocentrus_nattereri
ENSORLG00000028655-9979.278ENSRNOG00000009960Puf609179.167Rattus_norvegicus
ENSORLG00000028655-9978.707ENSRBIG00000035274PUF609778.598Rhinopithecus_bieti
ENSORLG00000028655-9978.707ENSRROG00000029360PUF609878.598Rhinopithecus_roxellana
ENSORLG00000028655-9977.376ENSSBOG00000027089PUF609777.273Saimiri_boliviensis_boliviensis
ENSORLG00000028655-8978.769ENSSHAG00000006668PUF608878.647Sarcophilus_harrisii
ENSORLG00000028655-9483.401ENSSFOG00015019371puf60a9883.401Scleropages_formosus
ENSORLG00000028655-9977.439ENSSFOG00015019619puf60b9979.518Scleropages_formosus
ENSORLG00000028655-7687.119ENSSMAG00000016381puf60b7886.859Scophthalmus_maximus
ENSORLG00000028655-9982.195ENSSDUG00000009935puf60b9982.195Seriola_dumerili
ENSORLG00000028655-9789.400ENSSDUG00000007048-9589.400Seriola_dumerili
ENSORLG00000028655-9987.016ENSSLDG00000007366-9986.822Seriola_lalandi_dorsalis
ENSORLG00000028655-9982.274ENSSLDG00000024011puf60b9980.488Seriola_lalandi_dorsalis
ENSORLG00000028655-6573.952ENSSPUG00000013518PUF609273.952Sphenodon_punctatus
ENSORLG00000028655-9978.799ENSSPAG00000012144puf60b9980.300Stegastes_partitus
ENSORLG00000028655-9988.350ENSSPAG00000020285-9989.709Stegastes_partitus
ENSORLG00000028655-9978.897ENSSSCG00000038800PUF609975.368Sus_scrofa
ENSORLG00000028655-9978.011ENSTGUG00000012797-9978.011Taeniopygia_guttata
ENSORLG00000028655-9983.852ENSTRUG00000008843-9983.164Takifugu_rubripes
ENSORLG00000028655-9982.466ENSTRUG00000005420puf60b9980.675Takifugu_rubripes
ENSORLG00000028655-9984.825ENSTNIG00000003069-9983.658Tetraodon_nigroviridis
ENSORLG00000028655-9982.659ENSTNIG00000013675puf60b9982.500Tetraodon_nigroviridis
ENSORLG00000028655-7762.963ENSTBEG00000001899-10063.739Tupaia_belangeri
ENSORLG00000028655-6380.399ENSTBEG00000002751-9980.667Tupaia_belangeri
ENSORLG00000028655-9977.905ENSTTRG00000017088PUF609978.030Tursiops_truncatus
ENSORLG00000028655-9978.897ENSUAMG00000024917PUF609778.788Ursus_americanus
ENSORLG00000028655-9974.335ENSUMAG00000000272PUF609274.053Ursus_maritimus
ENSORLG00000028655-9978.897ENSVVUG00000022527PUF609978.788Vulpes_vulpes
ENSORLG00000028655-9977.186ENSXETG00000012469puf609777.841Xenopus_tropicalis
ENSORLG00000028655-9979.920ENSXCOG00000012355puf60b9980.120Xiphophorus_couchianus
ENSORLG00000028655-9981.888ENSXMAG00000001862puf60b9982.081Xiphophorus_maculatus
ENSORLG00000028655-9984.241ENSXMAG00000010507-9883.852Xiphophorus_maculatus

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