EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028711 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3362 bases
Position: chr16:1155783-1159144
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000027002	zf-C2H2	PF00096.26	4.1e-17	1	2
ENSORLP00000027002	zf-C2H2	PF00096.26	4.1e-17	2	2
ENSORLP00000027002	zf-met	PF12874.7	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000041593	-	567	-	ENSORLP00000027002	188 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028711	-	88	32.804	ENSORLG00000023133	-	59	32.804
ENSORLG00000028711	-	94	35.366	ENSORLG00000001749	-	89	31.429
ENSORLG00000028711	-	96	31.868	ENSORLG00000000262	-	84	31.868
ENSORLG00000028711	-	92	33.714	ENSORLG00000029172	-	52	33.714
ENSORLG00000028711	-	95	31.609	ENSORLG00000028323	-	82	41.935
ENSORLG00000028711	-	93	32.174	ENSORLG00000027418	-	52	30.556
ENSORLG00000028711	-	95	36.111	ENSORLG00000024789	-	65	36.111
ENSORLG00000028711	-	91	43.548	ENSORLG00000027982	-	93	43.548
ENSORLG00000028711	-	91	32.778	ENSORLG00000013863	-	91	32.738
ENSORLG00000028711	-	90	41.935	ENSORLG00000028091	-	86	32.432
ENSORLG00000028711	-	88	33.766	ENSORLG00000028028	-	73	32.500
ENSORLG00000028711	-	93	31.579	ENSORLG00000028567	-	72	31.579
ENSORLG00000028711	-	89	40.244	ENSORLG00000029994	-	75	40.244
ENSORLG00000028711	-	88	31.325	ENSORLG00000022677	-	60	31.902
ENSORLG00000028711	-	90	39.683	ENSORLG00000027822	-	84	32.738
ENSORLG00000028711	-	96	34.118	ENSORLG00000025080	-	85	34.118
ENSORLG00000028711	-	89	42.857	ENSORLG00000023744	-	77	42.857
ENSORLG00000028711	-	89	32.738	ENSORLG00000024896	-	71	32.738
ENSORLG00000028711	-	92	37.681	ENSORLG00000028168	-	73	37.681
ENSORLG00000028711	-	90	32.984	ENSORLG00000000420	-	75	32.984
ENSORLG00000028711	-	95	38.571	ENSORLG00000023806	-	84	32.584
ENSORLG00000028711	-	92	39.437	ENSORLG00000027271	-	86	39.437
ENSORLG00000028711	-	95	33.333	ENSORLG00000029896	-	64	32.796
ENSORLG00000028711	-	91	32.571	ENSORLG00000023828	-	52	32.778
ENSORLG00000028711	-	89	40.278	ENSORLG00000023086	-	75	40.278
ENSORLG00000028711	-	95	43.548	ENSORLG00000012485	-	53	43.548
ENSORLG00000028711	-	90	33.333	ENSORLG00000002307	-	93	32.402
ENSORLG00000028711	-	90	38.571	ENSORLG00000024174	-	66	37.681
ENSORLG00000028711	-	93	30.964	ENSORLG00000028433	-	81	31.333
ENSORLG00000028711	-	89	32.222	ENSORLG00000025717	-	83	32.086
ENSORLG00000028711	-	89	40.299	ENSORLG00000027765	-	63	40.299
ENSORLG00000028711	-	92	32.258	ENSORLG00000029027	-	72	30.833
ENSORLG00000028711	-	92	31.034	ENSORLG00000000197	-	66	31.034
ENSORLG00000028711	-	97	31.551	ENSORLG00000000076	ZNF319	80	31.551
ENSORLG00000028711	-	88	38.710	ENSORLG00000029343	-	56	38.710
ENSORLG00000028711	-	91	38.235	ENSORLG00000007009	-	90	38.235
ENSORLG00000028711	-	93	33.981	ENSORLG00000024652	-	95	32.240
ENSORLG00000028711	-	95	41.667	ENSORLG00000007097	-	94	35.294
ENSORLG00000028711	-	89	44.262	ENSORLG00000006966	-	93	44.262
ENSORLG00000028711	-	89	32.022	ENSORLG00000026684	-	64	32.022
ENSORLG00000028711	-	91	30.508	ENSORLG00000028851	-	66	30.247
ENSORLG00000028711	-	91	37.097	ENSORLG00000022699	-	80	31.868
ENSORLG00000028711	-	88	31.073	ENSORLG00000002268	-	73	31.073
ENSORLG00000028711	-	94	32.022	ENSORLG00000027967	-	76	32.022
ENSORLG00000028711	-	89	32.967	ENSORLG00000001796	-	78	32.967
ENSORLG00000028711	-	95	38.095	ENSORLG00000000253	-	89	38.095
ENSORLG00000028711	-	89	31.461	ENSORLG00000029814	-	72	33.714
ENSORLG00000028711	-	88	32.386	ENSORLG00000027767	-	63	32.386
ENSORLG00000028711	-	93	39.744	ENSORLG00000012610	znf710b	54	36.458
ENSORLG00000028711	-	89	32.927	ENSORLG00000025576	-	94	32.927
ENSORLG00000028711	-	88	35.106	ENSORLG00000011040	-	93	35.106
ENSORLG00000028711	-	94	45.161	ENSORLG00000024399	-	82	33.529
ENSORLG00000028711	-	88	30.732	ENSORLG00000022187	-	58	30.732
ENSORLG00000028711	-	91	35.000	ENSORLG00000022350	-	71	35.000
ENSORLG00000028711	-	89	41.270	ENSORLG00000026852	-	65	41.270
ENSORLG00000028711	-	94	32.418	ENSORLG00000030630	-	83	31.429
ENSORLG00000028711	-	96	32.624	ENSORLG00000027575	-	58	32.624
ENSORLG00000028711	-	59	33.333	ENSORLG00000029440	-	65	33.333
ENSORLG00000028711	-	95	30.857	ENSORLG00000026811	-	66	36.905
ENSORLG00000028711	-	89	34.831	ENSORLG00000025380	-	71	34.831
ENSORLG00000028711	-	89	37.705	ENSORLG00000007032	-	87	37.705
ENSORLG00000028711	-	95	32.258	ENSORLG00000007263	-	78	32.584
ENSORLG00000028711	-	94	35.526	ENSORLG00000027186	-	79	33.129
ENSORLG00000028711	-	89	36.364	ENSORLG00000025702	-	61	36.364
ENSORLG00000028711	-	95	36.232	ENSORLG00000023497	-	55	36.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028711	-	88	36.000	ENSAPOG00000019138	-	56	36.000	Acanthochromis_polyacanthus
ENSORLG00000028711	-	81	46.552	ENSAPOG00000012437	-	77	46.552	Acanthochromis_polyacanthus
ENSORLG00000028711	-	89	32.593	ENSACIG00000017892	-	77	32.593	Amphilophus_citrinellus
ENSORLG00000028711	-	84	52.632	ENSACIG00000002944	-	55	52.632	Amphilophus_citrinellus
ENSORLG00000028711	-	88	36.709	ENSACIG00000007464	-	51	35.514	Amphilophus_citrinellus
ENSORLG00000028711	-	88	39.759	ENSAOCG00000016897	-	65	39.759	Amphiprion_ocellaris
ENSORLG00000028711	-	68	48.092	ENSAOCG00000006744	-	68	48.092	Amphiprion_ocellaris
ENSORLG00000028711	-	81	45.402	ENSAPEG00000015714	-	67	45.402	Amphiprion_percula
ENSORLG00000028711	-	88	39.759	ENSAPEG00000001556	-	65	39.759	Amphiprion_percula
ENSORLG00000028711	-	88	33.333	ENSAPEG00000010013	-	53	33.333	Amphiprion_percula
ENSORLG00000028711	-	94	44.444	ENSATEG00000018931	-	91	44.444	Anabas_testudineus
ENSORLG00000028711	-	74	48.837	ENSAMXG00000029518	-	50	48.837	Astyanax_mexicanus
ENSORLG00000028711	-	88	37.838	ENSCSEG00000010453	-	55	37.838	Cynoglossus_semilaevis
ENSORLG00000028711	-	95	43.548	ENSCVAG00000003250	-	71	43.548	Cyprinodon_variegatus
ENSORLG00000028711	-	91	35.849	ENSCVAG00000015616	-	90	35.849	Cyprinodon_variegatus
ENSORLG00000028711	-	95	31.395	ENSEBUG00000007931	-	62	31.395	Eptatretus_burgeri
ENSORLG00000028711	-	91	45.000	ENSELUG00000024007	-	58	45.000	Esox_lucius
ENSORLG00000028711	-	88	31.395	ENSHBUG00000006656	-	54	31.395	Haplochromis_burtoni
ENSORLG00000028711	-	90	37.500	ENSHCOG00000001873	-	60	37.500	Hippocampus_comes
ENSORLG00000028711	-	89	35.294	ENSHCOG00000015497	-	82	35.294	Hippocampus_comes
ENSORLG00000028711	-	89	43.548	ENSHCOG00000013489	-	82	43.548	Hippocampus_comes
ENSORLG00000028711	-	90	37.500	ENSHCOG00000008550	-	60	37.500	Hippocampus_comes
ENSORLG00000028711	-	90	33.051	ENSLBEG00000001132	-	68	33.051	Labrus_bergylta
ENSORLG00000028711	-	88	30.178	ENSLBEG00000007106	-	65	30.178	Labrus_bergylta
ENSORLG00000028711	-	96	33.094	ENSLOCG00000004208	-	95	33.094	Lepisosteus_oculatus
ENSORLG00000028711	-	96	37.662	ENSMAMG00000017939	-	92	37.662	Mastacembelus_armatus
ENSORLG00000028711	-	91	41.667	ENSMALG00000004279	-	66	41.667	Monopterus_albus
ENSORLG00000028711	-	88	34.906	ENSONIG00000005050	-	84	32.283	Oreochromis_niloticus
ENSORLG00000028711	-	96	31.092	ENSONIG00000007967	-	58	31.092	Oreochromis_niloticus
ENSORLG00000028711	-	89	30.935	ENSPMGG00000009571	-	73	31.667	Periophthalmus_magnuspinnatus
ENSORLG00000028711	-	90	44.262	ENSPMAG00000002022	-	100	44.262	Petromyzon_marinus
ENSORLG00000028711	-	89	35.294	ENSPFOG00000009491	-	53	35.294	Poecilia_formosa
ENSORLG00000028711	-	95	41.667	ENSPFOG00000018860	-	93	41.667	Poecilia_formosa
ENSORLG00000028711	-	95	41.667	ENSPLAG00000008941	-	75	41.667	Poecilia_latipinna
ENSORLG00000028711	-	89	31.646	ENSPLAG00000010067	-	67	31.646	Poecilia_latipinna
ENSORLG00000028711	-	89	35.294	ENSPMEG00000024117	-	53	35.294	Poecilia_mexicana
ENSORLG00000028711	-	74	38.710	ENSPREG00000002603	-	51	38.710	Poecilia_reticulata
ENSORLG00000028711	-	89	31.111	ENSPNAG00000005946	-	94	31.111	Pygocentrus_nattereri
ENSORLG00000028711	-	89	37.805	ENSSMAG00000013291	-	85	30.000	Scophthalmus_maximus
ENSORLG00000028711	-	86	33.094	ENSSPAG00000011533	-	76	33.094	Stegastes_partitus
ENSORLG00000028711	-	91	46.667	ENSXETG00000012506	znf91	97	46.667	Xenopus_tropicalis