EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028717 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1335 bases
Position: chr11:6496178-6497512
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000032709	RVT_1	PF00078.27	2.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045215	-	1335	-	ENSORLP00000032709	444 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028717	-	98	32.071	ENSORLG00000023700	-	91	32.071
ENSORLG00000028717	-	57	40.078	ENSORLG00000028976	-	68	40.078
ENSORLG00000028717	-	99	31.788	ENSORLG00000025323	-	51	31.788
ENSORLG00000028717	-	60	40.672	ENSORLG00000028858	-	62	40.672
ENSORLG00000028717	-	95	32.644	ENSORLG00000030415	-	53	32.644
ENSORLG00000028717	-	57	32.296	ENSORLG00000026207	-	92	32.296
ENSORLG00000028717	-	59	41.065	ENSORLG00000023046	-	64	41.065
ENSORLG00000028717	-	98	32.071	ENSORLG00000027545	-	54	32.071
ENSORLG00000028717	-	99	32.812	ENSORLG00000023193	-	53	32.812
ENSORLG00000028717	-	98	31.778	ENSORLG00000025476	-	53	31.778
ENSORLG00000028717	-	99	32.088	ENSORLG00000024437	-	51	32.088
ENSORLG00000028717	-	72	37.576	ENSORLG00000028706	-	65	37.576
ENSORLG00000028717	-	99	32.088	ENSORLG00000026318	-	51	32.088
ENSORLG00000028717	-	99	32.450	ENSORLG00000029928	-	67	32.450
ENSORLG00000028717	-	99	31.788	ENSORLG00000025901	-	54	31.788
ENSORLG00000028717	-	99	32.450	ENSORLG00000028121	-	51	32.450
ENSORLG00000028717	-	99	32.450	ENSORLG00000025260	-	56	32.450
ENSORLG00000028717	-	98	32.071	ENSORLG00000029714	-	51	32.071
ENSORLG00000028717	-	99	32.450	ENSORLG00000023575	-	56	32.450
ENSORLG00000028717	-	99	32.671	ENSORLG00000029071	-	65	32.671
ENSORLG00000028717	-	60	41.264	ENSORLG00000030126	-	61	41.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028717	-	79	46.045	ENSAPEG00000021324	-	83	46.045	Amphiprion_percula
ENSORLG00000028717	-	88	40.759	ENSAPEG00000013789	-	53	40.759	Amphiprion_percula
ENSORLG00000028717	-	61	33.333	ENSACLG00000025717	-	82	33.333	Astatotilapia_calliptera
ENSORLG00000028717	-	63	36.749	ENSACLG00000005315	-	62	36.749	Astatotilapia_calliptera
ENSORLG00000028717	-	52	35.745	ENSACLG00000014736	-	96	35.745	Astatotilapia_calliptera
ENSORLG00000028717	-	60	36.630	ENSACLG00000019432	-	60	36.630	Astatotilapia_calliptera
ENSORLG00000028717	-	55	36.066	ENSACLG00000017900	-	96	36.066	Astatotilapia_calliptera
ENSORLG00000028717	-	70	34.906	ENSCVAG00000009961	-	62	34.906	Cyprinodon_variegatus
ENSORLG00000028717	-	61	46.494	ENSFHEG00000014931	-	52	46.494	Fundulus_heteroclitus
ENSORLG00000028717	-	53	37.288	ENSHBUG00000003593	-	91	37.288	Haplochromis_burtoni
ENSORLG00000028717	-	60	40.149	ENSHBUG00000015481	-	68	40.149	Haplochromis_burtoni
ENSORLG00000028717	-	60	39.700	ENSLBEG00000012683	-	68	39.700	Labrus_bergylta
ENSORLG00000028717	-	60	39.483	ENSLBEG00000015744	-	98	39.483	Labrus_bergylta
ENSORLG00000028717	-	55	38.400	ENSLBEG00000022922	-	81	38.400	Labrus_bergylta
ENSORLG00000028717	-	54	38.115	ENSMZEG00005014401	-	69	38.115	Maylandia_zebra
ENSORLG00000028717	-	55	36.066	ENSMZEG00005015360	-	96	36.066	Maylandia_zebra
ENSORLG00000028717	-	57	34.902	ENSMMOG00000014893	-	87	34.902	Mola_mola
ENSORLG00000028717	-	97	32.287	ENSORLG00020005447	-	76	32.287	Oryzias_latipes_hni
ENSORLG00000028717	-	63	50.534	ENSORLG00020017190	-	65	50.534	Oryzias_latipes_hni
ENSORLG00000028717	-	81	49.180	ENSORLG00015013361	-	95	49.180	Oryzias_latipes_hsok
ENSORLG00000028717	-	55	35.887	ENSORLG00015003246	-	93	35.887	Oryzias_latipes_hsok
ENSORLG00000028717	-	86	32.134	ENSPKIG00000004060	-	90	32.134	Paramormyrops_kingsleyae
ENSORLG00000028717	-	84	34.204	ENSPKIG00000013191	-	81	34.204	Paramormyrops_kingsleyae
ENSORLG00000028717	-	85	46.316	ENSPFOG00000024165	-	88	46.316	Poecilia_formosa
ENSORLG00000028717	-	51	37.339	ENSPLAG00000014995	-	84	37.339	Poecilia_latipinna
ENSORLG00000028717	-	63	32.746	ENSPMEG00000016120	-	97	32.746	Poecilia_mexicana
ENSORLG00000028717	-	70	33.746	ENSPNYG00000005142	-	69	33.746	Pundamilia_nyererei
ENSORLG00000028717	-	97	40.275	ENSPNAG00000027547	-	79	40.275	Pygocentrus_nattereri
ENSORLG00000028717	-	58	39.080	ENSXETG00000030237	-	100	39.080	Xenopus_tropicalis
ENSORLG00000028717	-	51	33.766	ENSXETG00000033469	-	95	33.766	Xenopus_tropicalis
ENSORLG00000028717	-	57	34.363	ENSXETG00000032645	-	99	34.363	Xenopus_tropicalis
ENSORLG00000028717	-	54	31.687	ENSXCOG00000007285	-	76	31.687	Xiphophorus_couchianus
ENSORLG00000028717	-	53	40.928	ENSXMAG00000026828	-	88	40.928	Xiphophorus_maculatus