EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028885 (Gene tree)
Gene ID: 101171964
Gene Symbol: rab35b
Alias: -
Full Name: RAB35%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 13512 bases
Position: chr9:25716366-25729877
Accession: 101171964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000045332	MMR_HSR1	PF01926.23	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000032347	-	5357	XM_004084502	ENSORLP00000045332	201 (aa)	XP_004084550	UPI0002A4C827
ENSORLT00000023196	-	555	-	ENSORLP00000023195	184 (aa)	-	H2MWF6

Gene Model

Click here to download ENSORLG00000028885's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028885	rab35b	95	36.735	ENSORLG00000001351	-	93	36.735
ENSORLG00000028885	rab35b	99	39.713	ENSORLG00000030642	zgc:101559	90	39.713
ENSORLG00000028885	rab35b	96	41.709	ENSORLG00000030566	rab33a	71	41.709
ENSORLG00000028885	rab35b	100	56.585	ENSORLG00000028104	rab1ab	100	56.585
ENSORLG00000028885	rab35b	99	43.541	ENSORLG00000013938	rab11bb	96	43.541
ENSORLG00000028885	rab35b	77	36.875	ENSORLG00000001566	rhebl1	85	36.875
ENSORLG00000028885	rab35b	85	48.837	ENSORLG00000004624	rab18a	84	48.837
ENSORLG00000028885	rab35b	86	48.276	ENSORLG00000024116	RAB15	84	48.276
ENSORLG00000028885	rab35b	74	45.161	ENSORLG00000002071	-	64	45.161
ENSORLG00000028885	rab35b	76	37.267	ENSORLG00000000937	-	75	37.267
ENSORLG00000028885	rab35b	80	66.049	ENSORLG00000021846	-	80	66.049
ENSORLG00000028885	rab35b	97	34.500	ENSORLG00000017806	rab9a	97	34.500
ENSORLG00000028885	rab35b	57	30.400	ENSORLG00000020457	rabl3	53	30.400
ENSORLG00000028885	rab35b	76	39.610	ENSORLG00000027669	RAB41	73	39.610
ENSORLG00000028885	rab35b	96	37.019	ENSORLG00000003119	rab34b	73	37.019
ENSORLG00000028885	rab35b	76	35.032	ENSORLG00000025819	-	83	35.032
ENSORLG00000028885	rab35b	85	48.256	ENSORLG00000009609	rab18b	83	48.256
ENSORLG00000028885	rab35b	87	32.768	ENSORLG00000025519	rras	83	34.146
ENSORLG00000028885	rab35b	98	33.816	ENSORLG00000027892	RAB29	83	36.257
ENSORLG00000028885	rab35b	99	44.660	ENSORLG00000018331	RAB11A	96	44.660
ENSORLG00000028885	rab35b	88	44.382	ENSORLG00000013432	rab2a	75	47.468
ENSORLG00000028885	rab35b	99	34.783	ENSORLG00000006628	-	95	34.783
ENSORLG00000028885	rab35b	89	35.754	ENSORLG00000010115	rab23	94	34.673
ENSORLG00000028885	rab35b	77	45.570	ENSORLG00000001850	RAB39B	74	45.570
ENSORLG00000028885	rab35b	98	42.233	ENSORLG00000016135	rab25b	86	46.746
ENSORLG00000028885	rab35b	79	40.881	ENSORLG00000003882	rab5c	89	35.897
ENSORLG00000028885	rab35b	96	40.513	ENSORLG00000024558	-	68	44.848
ENSORLG00000028885	rab35b	87	44.149	ENSORLG00000030109	rab33ba	79	44.865
ENSORLG00000028885	rab35b	76	38.065	ENSORLG00000018912	hrasb	81	38.065
ENSORLG00000028885	rab35b	79	45.912	ENSORLG00000029921	-	74	45.912
ENSORLG00000028885	rab35b	99	68.447	ENSORLG00000001098	si:dkey-16l2.16	98	68.447
ENSORLG00000028885	rab35b	100	46.040	ENSORLG00000025395	-	99	46.040
ENSORLG00000028885	rab35b	99	43.128	ENSORLG00000016126	rab11al	96	41.546
ENSORLG00000028885	rab35b	99	44.019	ENSORLG00000015307	rab11ba	76	50.000
ENSORLG00000028885	rab35b	82	36.527	ENSORLG00000024443	zgc:55558	89	36.527
ENSORLG00000028885	rab35b	86	34.091	ENSORLG00000018119	si:ch73-116o1.2	84	31.795
ENSORLG00000028885	rab35b	86	51.429	ENSORLG00000029812	rab30	86	51.429
ENSORLG00000028885	rab35b	80	43.902	ENSORLG00000022335	rab42a	75	43.902
ENSORLG00000028885	rab35b	82	37.278	ENSORLG00000003681	rheb	88	37.278
ENSORLG00000028885	rab35b	79	45.912	ENSORLG00000007406	rab14	74	45.912
ENSORLG00000028885	rab35b	98	38.967	ENSORLG00000014099	si:dkey-34d22.5	97	38.967
ENSORLG00000028885	rab35b	89	42.541	ENSORLG00000003902	rab12	74	42.778
ENSORLG00000028885	rab35b	79	36.478	ENSORLG00000016290	rab6bb	81	36.478
ENSORLG00000028885	rab35b	85	30.435	ENSORLG00000009874	rabl2	69	31.481
ENSORLG00000028885	rab35b	88	51.412	ENSORLG00000010846	rab15	83	51.412
ENSORLG00000028885	rab35b	95	36.735	ENSORLG00000025098	si:dkey-13a21.4	83	39.766
ENSORLG00000028885	rab35b	88	44.068	ENSORLG00000016555	rab3db	83	44.318
ENSORLG00000028885	rab35b	60	30.081	ENSORLG00000009664	arl5a	66	30.081
ENSORLG00000028885	rab35b	96	40.722	ENSORLG00000012261	rab5aa	89	40.722
ENSORLG00000028885	rab35b	86	33.714	ENSORLG00000024102	kras	90	34.884
ENSORLG00000028885	rab35b	79	44.444	ENSORLG00000008345	-	76	44.444
ENSORLG00000028885	rab35b	84	38.506	ENSORLG00000029090	-	84	38.506
ENSORLG00000028885	rab35b	76	38.961	ENSORLG00000026197	rab6a	74	38.961
ENSORLG00000028885	rab35b	93	31.156	ENSORLG00000001134	dnajc27	73	31.156
ENSORLG00000028885	rab35b	94	44.560	ENSORLG00000015284	-	55	49.398
ENSORLG00000028885	rab35b	96	34.783	ENSORLG00000004394	rab34a	77	34.783
ENSORLG00000028885	rab35b	98	40.000	ENSORLG00000012158	rab25a	96	40.000
ENSORLG00000028885	rab35b	97	35.961	ENSORLG00000006405	rab9b	93	35.468
ENSORLG00000028885	rab35b	80	64.815	ENSORLG00000000602	zgc:171927	76	64.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028885	rab35b	100	94.527	ENSG00000111737	RAB35	100	94.527	Homo_sapiens
ENSORLG00000028885	rab35b	100	99.005	ENSAPOG00000007363	rab35b	100	99.005	Acanthochromis_polyacanthus
ENSORLG00000028885	rab35b	100	99.005	ENSAOCG00000005934	rab35b	100	99.005	Amphiprion_ocellaris
ENSORLG00000028885	rab35b	100	99.005	ENSAPEG00000001130	rab35b	100	99.005	Amphiprion_percula
ENSORLG00000028885	rab35b	100	98.507	ENSATEG00000013281	rab35b	100	98.507	Anabas_testudineus
ENSORLG00000028885	rab35b	100	94.030	ENSACAG00000003643	RAB35	100	94.030	Anolis_carolinensis
ENSORLG00000028885	rab35b	100	94.527	ENSANAG00000036954	RAB35	100	94.527	Aotus_nancymaae
ENSORLG00000028885	rab35b	100	93.532	ENSAMXG00000040604	-	100	93.532	Astyanax_mexicanus
ENSORLG00000028885	rab35b	100	96.020	ENSAMXG00000039865	rab35b	100	96.020	Astyanax_mexicanus
ENSORLG00000028885	rab35b	100	94.527	ENSBTAG00000022044	RAB35	100	94.527	Bos_taurus
ENSORLG00000028885	rab35b	100	94.527	ENSCJAG00000008955	RAB35	100	94.527	Callithrix_jacchus
ENSORLG00000028885	rab35b	100	94.527	ENSCAFG00020018913	RAB35	100	94.527	Canis_lupus_dingo
ENSORLG00000028885	rab35b	100	94.527	ENSCCAG00000031720	RAB35	100	94.527	Cebus_capucinus
ENSORLG00000028885	rab35b	100	94.527	ENSCATG00000037465	RAB35	100	94.527	Cercocebus_atys
ENSORLG00000028885	rab35b	100	94.527	ENSCLAG00000013339	RAB35	100	94.527	Chinchilla_lanigera
ENSORLG00000028885	rab35b	100	94.527	ENSCSAG00000002276	RAB35	100	94.527	Chlorocebus_sabaeus
ENSORLG00000028885	rab35b	100	94.527	ENSCPBG00000012631	RAB35	100	94.527	Chrysemys_picta_bellii
ENSORLG00000028885	rab35b	100	88.060	ENSCGRG00001023636	Rab35	100	88.060	Cricetulus_griseus_chok1gshd
ENSORLG00000028885	rab35b	100	98.507	ENSCSEG00000013400	rab35b	100	98.507	Cynoglossus_semilaevis
ENSORLG00000028885	rab35b	100	98.507	ENSCVAG00000012806	rab35b	100	98.507	Cyprinodon_variegatus
ENSORLG00000028885	rab35b	100	95.522	ENSDARG00000058425	rab35b	100	95.522	Danio_rerio
ENSORLG00000028885	rab35b	80	96.250	ENSDARG00000102078	CABZ01072548.1	82	96.250	Danio_rerio
ENSORLG00000028885	rab35b	100	94.527	ENSDORG00000000972	Rab35	100	94.527	Dipodomys_ordii
ENSORLG00000028885	rab35b	100	98.010	ENSELUG00000023972	rab35	100	98.010	Esox_lucius
ENSORLG00000028885	rab35b	100	94.527	ENSFCAG00000032566	RAB35	100	94.527	Felis_catus
ENSORLG00000028885	rab35b	92	94.022	ENSFALG00000007652	RAB35	92	90.306	Ficedula_albicollis
ENSORLG00000028885	rab35b	100	98.010	ENSFHEG00000004891	rab35b	100	98.010	Fundulus_heteroclitus
ENSORLG00000028885	rab35b	95	96.842	ENSGMOG00000017688	rab35b	100	95.522	Gadus_morhua
ENSORLG00000028885	rab35b	100	94.030	ENSGALG00000007308	RAB35	100	94.030	Gallus_gallus
ENSORLG00000028885	rab35b	100	98.507	ENSGACG00000013548	rab35b	100	98.507	Gasterosteus_aculeatus
ENSORLG00000028885	rab35b	100	94.527	ENSGAGG00000017207	RAB35	100	94.527	Gopherus_agassizii
ENSORLG00000028885	rab35b	100	99.005	ENSHBUG00000001416	rab35b	100	99.005	Haplochromis_burtoni
ENSORLG00000028885	rab35b	100	94.527	ENSHGLG00000012703	RAB35	100	94.527	Heterocephalus_glaber_female
ENSORLG00000028885	rab35b	100	93.532	ENSIPUG00000024622	rab35	100	93.532	Ictalurus_punctatus
ENSORLG00000028885	rab35b	100	93.532	ENSIPUG00000011489	Rab35	100	93.532	Ictalurus_punctatus
ENSORLG00000028885	rab35b	100	94.527	ENSJJAG00000010646	Rab35	100	94.527	Jaculus_jaculus
ENSORLG00000028885	rab35b	100	98.507	ENSKMAG00000006854	rab35b	100	98.507	Kryptolebias_marmoratus
ENSORLG00000028885	rab35b	100	98.507	ENSLBEG00000001618	rab35b	100	98.507	Labrus_bergylta
ENSORLG00000028885	rab35b	100	80.392	ENSLACG00000018444	RAB35	100	80.392	Latimeria_chalumnae
ENSORLG00000028885	rab35b	100	96.517	ENSLOCG00000001637	rab35b	98	96.517	Lepisosteus_oculatus
ENSORLG00000028885	rab35b	100	94.527	ENSMFAG00000038261	RAB35	100	94.527	Macaca_fascicularis
ENSORLG00000028885	rab35b	100	94.527	ENSMMUG00000046831	RAB35	100	94.527	Macaca_mulatta
ENSORLG00000028885	rab35b	100	94.527	ENSMNEG00000043655	RAB35	100	94.527	Macaca_nemestrina
ENSORLG00000028885	rab35b	100	98.010	ENSMZEG00005002918	rab35b	100	98.010	Maylandia_zebra
ENSORLG00000028885	rab35b	92	94.022	ENSMGAG00000008922	RAB35	100	94.022	Meleagris_gallopavo
ENSORLG00000028885	rab35b	100	94.527	ENSMAUG00000009328	Rab35	100	94.527	Mesocricetus_auratus
ENSORLG00000028885	rab35b	100	94.527	ENSMICG00000047356	RAB35	100	94.527	Microcebus_murinus
ENSORLG00000028885	rab35b	98	90.306	ENSMOCG00000019999	Rab35	98	90.306	Microtus_ochrogaster
ENSORLG00000028885	rab35b	58	100.000	ENSMALG00000003479	rab35b	75	100.000	Monopterus_albus
ENSORLG00000028885	rab35b	100	94.527	MGP_CAROLIEiJ_G0027632	Rab35	100	94.527	Mus_caroli
ENSORLG00000028885	rab35b	100	94.527	ENSMUSG00000029518	Rab35	100	94.527	Mus_musculus
ENSORLG00000028885	rab35b	100	94.527	MGP_PahariEiJ_G0024212	Rab35	100	94.527	Mus_pahari
ENSORLG00000028885	rab35b	100	94.527	MGP_SPRETEiJ_G0028630	Rab35	100	94.527	Mus_spretus
ENSORLG00000028885	rab35b	100	94.527	ENSODEG00000007219	RAB35	100	94.527	Octodon_degus
ENSORLG00000028885	rab35b	100	99.005	ENSONIG00000015990	rab35b	100	99.005	Oreochromis_niloticus
ENSORLG00000028885	rab35b	100	99.502	ENSORLG00015010042	rab35b	100	99.502	Oryzias_latipes_hsok
ENSORLG00000028885	rab35b	100	94.527	ENSPPRG00000013225	RAB35	100	94.527	Panthera_pardus
ENSORLG00000028885	rab35b	100	94.527	ENSPTRG00000005524	RAB35	100	94.527	Pan_troglodytes
ENSORLG00000028885	rab35b	100	96.020	ENSPKIG00000025079	rab35b	100	96.020	Paramormyrops_kingsleyae
ENSORLG00000028885	rab35b	100	93.069	ENSPKIG00000016213	-	100	93.069	Paramormyrops_kingsleyae
ENSORLG00000028885	rab35b	100	98.507	ENSPFOG00000006655	rab35b	100	98.507	Poecilia_formosa
ENSORLG00000028885	rab35b	100	98.507	ENSPLAG00000020989	rab35b	100	98.507	Poecilia_latipinna
ENSORLG00000028885	rab35b	100	98.507	ENSPMEG00000021947	rab35b	100	98.507	Poecilia_mexicana
ENSORLG00000028885	rab35b	100	94.527	ENSPPYG00000005021	RAB35	100	94.527	Pongo_abelii
ENSORLG00000028885	rab35b	100	95.025	ENSPCOG00000026153	RAB35	100	95.025	Propithecus_coquereli
ENSORLG00000028885	rab35b	100	95.025	ENSPVAG00000003103	RAB35	100	95.025	Pteropus_vampyrus
ENSORLG00000028885	rab35b	100	98.507	ENSPNYG00000007156	rab35b	100	98.507	Pundamilia_nyererei
ENSORLG00000028885	rab35b	100	93.035	ENSPNAG00000014046	-	100	93.035	Pygocentrus_nattereri
ENSORLG00000028885	rab35b	100	94.527	ENSRNOG00000022014	Rab35	100	94.527	Rattus_norvegicus
ENSORLG00000028885	rab35b	100	96.517	ENSSFOG00015006076	rab35	100	96.517	Scleropages_formosus
ENSORLG00000028885	rab35b	100	98.507	ENSSMAG00000000660	rab35b	100	98.507	Scophthalmus_maximus
ENSORLG00000028885	rab35b	100	98.507	ENSSDUG00000004950	rab35b	100	98.507	Seriola_dumerili
ENSORLG00000028885	rab35b	100	95.025	ENSSPUG00000016258	RAB35	100	95.025	Sphenodon_punctatus
ENSORLG00000028885	rab35b	100	99.005	ENSSPAG00000008400	rab35b	100	99.005	Stegastes_partitus
ENSORLG00000028885	rab35b	100	94.527	ENSSSCG00000033876	RAB35	100	94.527	Sus_scrofa
ENSORLG00000028885	rab35b	100	93.532	ENSTGUG00000009359	RAB35	100	93.532	Taeniopygia_guttata
ENSORLG00000028885	rab35b	100	98.507	ENSTRUG00000020633	rab35b	100	98.507	Takifugu_rubripes
ENSORLG00000028885	rab35b	100	93.035	ENSXETG00000026943	rab35	100	93.035	Xenopus_tropicalis