EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000028894 (Gene tree)
Gene ID: 101159000
Gene Symbol: -
Alias: -
Full Name: msx2-interacting protein-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 18866 bases
Position: chr7:121540-140405
Accession: 101159000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000029780	RRM_5	PF13893.6	2.8e-07	1	2
ENSORLP00000029780	RRM_5	PF13893.6	2.8e-07	2	2
ENSORLP00000032835	RRM_5	PF13893.6	2.9e-07	1	2
ENSORLP00000032835	RRM_5	PF13893.6	2.9e-07	2	2
ENSORLP00000029780	RRM_1	PF00076.22	2.3e-20	1	2
ENSORLP00000029780	RRM_1	PF00076.22	2.3e-20	2	2
ENSORLP00000032835	RRM_1	PF00076.22	2.4e-20	1	2
ENSORLP00000032835	RRM_1	PF00076.22	2.4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000028730	-	9542	-	ENSORLP00000029780	2999 (aa)	-	-
ENSORLT00000027648	-	14079	XM_023957126	ENSORLP00000032835	3037 (aa)	XP_023812894	UPI0005CC38F2

Gene Model

Click here to download ENSORLG00000028894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028894's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028894	-	85	76.650	ENSG00000065526	SPEN	71	75.743	Homo_sapiens
ENSORLG00000028894	-	100	67.574	ENSAPOG00000009853	-	87	67.639	Acanthochromis_polyacanthus
ENSORLG00000028894	-	94	82.840	ENSAPOG00000011411	si:ch1073-335m2.2	87	82.840	Acanthochromis_polyacanthus
ENSORLG00000028894	-	89	81.667	ENSAMEG00000011817	SPEN	68	81.667	Ailuropoda_melanoleuca
ENSORLG00000028894	-	100	67.446	ENSAOCG00000014505	-	87	67.510	Amphiprion_ocellaris
ENSORLG00000028894	-	100	67.510	ENSAPEG00000010288	-	87	67.574	Amphiprion_percula
ENSORLG00000028894	-	100	65.558	ENSATEG00000005627	-	87	65.717	Anabas_testudineus
ENSORLG00000028894	-	97	69.438	ENSACLG00000021433	si:ch1073-335m2.2	88	69.438	Astatotilapia_calliptera
ENSORLG00000028894	-	100	65.930	ENSACLG00000016922	-	89	66.122	Astatotilapia_calliptera
ENSORLG00000028894	-	100	46.581	ENSAMXG00000012485	spen	87	46.948	Astyanax_mexicanus
ENSORLG00000028894	-	99	41.261	ENSBTAG00000018729	SPEN	73	73.077	Bos_taurus
ENSORLG00000028894	-	91	84.756	ENSCJAG00000008527	SPEN	74	84.756	Callithrix_jacchus
ENSORLG00000028894	-	60	36.804	ENSCAFG00000016132	-	56	37.046	Canis_familiaris
ENSORLG00000028894	-	86	77.228	ENSCHIG00000025070	SPEN	83	77.228	Capra_hircus
ENSORLG00000028894	-	63	77.157	ENSTSYG00000036016	SPEN	90	77.157	Carlito_syrichta
ENSORLG00000028894	-	99	77.665	ENSCAPG00000013803	SPEN	87	77.665	Cavia_aperea
ENSORLG00000028894	-	92	77.157	ENSCCAG00000020258	SPEN	76	77.157	Cebus_capucinus
ENSORLG00000028894	-	85	77.157	ENSCATG00000015079	SPEN	79	77.157	Cercocebus_atys
ENSORLG00000028894	-	55	38.356	ENSCPBG00000010477	SPEN	89	40.649	Chrysemys_picta_bellii
ENSORLG00000028894	-	85	77.157	ENSCANG00000034547	SPEN	75	77.157	Colobus_angolensis_palliatus
ENSORLG00000028894	-	83	77.551	ENSCGRG00001007725	Spen	72	77.551	Cricetulus_griseus_chok1gshd
ENSORLG00000028894	-	83	77.551	ENSCGRG00000010581	Spen	73	77.551	Cricetulus_griseus_crigri
ENSORLG00000028894	-	100	61.792	ENSCSEG00000003915	-	87	62.876	Cynoglossus_semilaevis
ENSORLG00000028894	-	100	64.412	ENSCVAG00000016346	-	87	64.412	Cyprinodon_variegatus
ENSORLG00000028894	-	97	65.618	ENSCVAG00000009075	si:ch1073-335m2.2	87	36.879	Cyprinodon_variegatus
ENSORLG00000028894	-	100	45.228	ENSDARG00000074245	spen	87	45.426	Danio_rerio
ENSORLG00000028894	-	100	37.440	ENSDARG00000074332	si:ch1073-335m2.2	87	37.134	Danio_rerio
ENSORLG00000028894	-	94	77.665	ENSDNOG00000041948	SPEN	78	77.665	Dasypus_novemcinctus
ENSORLG00000028894	-	96	40.646	ENSDORG00000023909	Spen	89	37.790	Dipodomys_ordii
ENSORLG00000028894	-	99	77.157	ENSEASG00005015911	SPEN	76	77.157	Equus_asinus_asinus
ENSORLG00000028894	-	99	77.157	ENSECAG00000008833	SPEN	76	77.157	Equus_caballus
ENSORLG00000028894	-	95	44.436	ENSELUG00000007726	si:ch1073-335m2.2	81	44.830	Esox_lucius
ENSORLG00000028894	-	96	43.480	ENSFALG00000003551	SPEN	100	42.034	Ficedula_albicollis
ENSORLG00000028894	-	84	84.884	ENSFDAG00000010212	SPEN	81	84.884	Fukomys_damarensis
ENSORLG00000028894	-	100	52.960	ENSGMOG00000008397	-	88	52.798	Gadus_morhua
ENSORLG00000028894	-	93	38.513	ENSGMOG00000008156	si:ch1073-335m2.2	71	33.488	Gadus_morhua
ENSORLG00000028894	-	55	38.483	ENSGALG00000036932	SPEN	88	41.030	Gallus_gallus
ENSORLG00000028894	-	100	65.255	ENSGAFG00000015819	-	87	65.223	Gambusia_affinis
ENSORLG00000028894	-	97	66.667	ENSGAFG00000021570	si:ch1073-335m2.2	87	37.220	Gambusia_affinis
ENSORLG00000028894	-	100	62.240	ENSGACG00000005341	-	88	62.400	Gasterosteus_aculeatus
ENSORLG00000028894	-	100	41.325	ENSGAGG00000020785	SPEN	90	41.116	Gopherus_agassizii
ENSORLG00000028894	-	97	69.213	ENSHBUG00000023253	si:ch1073-335m2.2	85	69.213	Haplochromis_burtoni
ENSORLG00000028894	-	100	66.208	ENSHBUG00000020626	-	87	66.240	Haplochromis_burtoni
ENSORLG00000028894	-	86	77.157	ENSHGLG00000019259	SPEN	73	77.157	Heterocephalus_glaber_female
ENSORLG00000028894	-	57	77.157	ENSHGLG00100019294	SPEN	55	77.157	Heterocephalus_glaber_male
ENSORLG00000028894	-	100	38.659	ENSIPUG00000018212	si:ch1073-335m2.2	90	40.951	Ictalurus_punctatus
ENSORLG00000028894	-	100	44.992	ENSIPUG00000021668	spen	87	45.301	Ictalurus_punctatus
ENSORLG00000028894	-	87	77.157	ENSSTOG00000021428	SPEN	74	77.157	Ictidomys_tridecemlineatus
ENSORLG00000028894	-	99	77.157	ENSJJAG00000010882	Spen	87	77.157	Jaculus_jaculus
ENSORLG00000028894	-	95	69.652	ENSKMAG00000021725	si:ch1073-335m2.2	88	37.535	Kryptolebias_marmoratus
ENSORLG00000028894	-	100	65.430	ENSKMAG00000003882	-	87	65.590	Kryptolebias_marmoratus
ENSORLG00000028894	-	96	62.293	ENSLBEG00000019129	-	100	62.318	Labrus_bergylta
ENSORLG00000028894	-	99	83.721	ENSLACG00000003258	SPEN	86	83.721	Latimeria_chalumnae
ENSORLG00000028894	-	100	46.557	ENSLOCG00000007896	si:ch1073-335m2.2	89	47.247	Lepisosteus_oculatus
ENSORLG00000028894	-	85	77.157	ENSMFAG00000041974	SPEN	76	77.157	Macaca_fascicularis
ENSORLG00000028894	-	85	77.157	ENSMMUG00000008026	SPEN	76	77.157	Macaca_mulatta
ENSORLG00000028894	-	88	77.157	ENSMNEG00000042402	SPEN	76	77.157	Macaca_nemestrina
ENSORLG00000028894	-	100	66.079	ENSMZEG00005021491	-	97	66.143	Maylandia_zebra
ENSORLG00000028894	-	97	69.438	ENSMZEG00005011762	si:ch1073-335m2.2	85	69.438	Maylandia_zebra
ENSORLG00000028894	-	79	77.228	ENSMAUG00000008318	Spen	81	77.228	Mesocricetus_auratus
ENSORLG00000028894	-	86	77.665	ENSMICG00000030994	SPEN	72	77.665	Microcebus_murinus
ENSORLG00000028894	-	82	80.769	ENSMOCG00000016083	Spen	72	80.769	Microtus_ochrogaster
ENSORLG00000028894	-	98	77.049	ENSMODG00000003411	SPEN	85	77.049	Monodelphis_domestica
ENSORLG00000028894	-	100	65.473	ENSMALG00000008625	-	87	65.409	Monopterus_albus
ENSORLG00000028894	-	63	77.157	ENSMUSG00000040761	Spen	66	77.157	Mus_musculus
ENSORLG00000028894	-	59	78.173	MGP_PahariEiJ_G0029076	Spen	51	78.173	Mus_pahari
ENSORLG00000028894	-	76	77.157	MGP_SPRETEiJ_G0027724	Spen	74	77.157	Mus_spretus
ENSORLG00000028894	-	85	83.908	ENSMPUG00000016317	SPEN	82	83.908	Mustela_putorius_furo
ENSORLG00000028894	-	91	77.665	ENSNGAG00000000641	Spen	85	77.665	Nannospalax_galili
ENSORLG00000028894	-	89	69.213	ENSNBRG00000005733	si:ch1073-335m2.2	85	69.213	Neolamprologus_brichardi
ENSORLG00000028894	-	97	65.215	ENSNBRG00000022090	-	100	65.215	Neolamprologus_brichardi
ENSORLG00000028894	-	73	83.333	ENSMEUG00000002422	SPEN	74	83.333	Notamacropus_eugenii
ENSORLG00000028894	-	79	78.173	ENSOPRG00000015800	SPEN	69	60.826	Ochotona_princeps
ENSORLG00000028894	-	68	76.650	ENSODEG00000016644	SPEN	58	76.650	Octodon_degus
ENSORLG00000028894	-	100	65.430	ENSONIG00000006573	-	88	65.558	Oreochromis_niloticus
ENSORLG00000028894	-	75	81.250	ENSOCUG00000010840	SPEN	68	77.665	Oryctolagus_cuniculus
ENSORLG00000028894	-	100	97.135	ENSORLG00020007735	-	100	97.135	Oryzias_latipes_hni
ENSORLG00000028894	-	100	97.004	ENSORLG00015022085	-	87	97.004	Oryzias_latipes_hsok
ENSORLG00000028894	-	96	82.716	ENSORLG00015005537	si:ch1073-335m2.2	86	82.840	Oryzias_latipes_hsok
ENSORLG00000028894	-	96	81.707	ENSOMEG00000004509	si:ch1073-335m2.2	86	82.249	Oryzias_melastigma
ENSORLG00000028894	-	100	81.260	ENSOMEG00000007639	-	87	81.260	Oryzias_melastigma
ENSORLG00000028894	-	96	81.319	ENSOGAG00000025110	SPEN	83	78.173	Otolemur_garnettii
ENSORLG00000028894	-	99	40.421	ENSOARG00000008477	SPEN	85	41.170	Ovis_aries
ENSORLG00000028894	-	100	50.000	ENSPKIG00000010492	si:ch1073-335m2.2	90	50.187	Paramormyrops_kingsleyae
ENSORLG00000028894	-	100	45.672	ENSPKIG00000002617	SPEN	87	45.683	Paramormyrops_kingsleyae
ENSORLG00000028894	-	93	45.593	ENSPFOG00000017986	si:ch1073-335m2.2	87	37.950	Poecilia_formosa
ENSORLG00000028894	-	82	34.247	ENSPLAG00000016625	si:ch1073-335m2.2	87	38.029	Poecilia_latipinna
ENSORLG00000028894	-	100	65.279	ENSPMEG00000006764	-	87	65.247	Poecilia_mexicana
ENSORLG00000028894	-	93	45.508	ENSPMEG00000002674	si:ch1073-335m2.2	90	37.703	Poecilia_mexicana
ENSORLG00000028894	-	100	65.215	ENSPREG00000010399	-	87	65.183	Poecilia_reticulata
ENSORLG00000028894	-	75	36.758	ENSPREG00000005357	si:ch1073-335m2.2	72	34.132	Poecilia_reticulata
ENSORLG00000028894	-	90	78.173	ENSPCAG00000009543	SPEN	78	78.173	Procavia_capensis
ENSORLG00000028894	-	99	75.253	ENSPCOG00000021735	SPEN	78	75.253	Propithecus_coquereli
ENSORLG00000028894	-	66	76.650	ENSPVAG00000013794	SPEN	53	72.770	Pteropus_vampyrus
ENSORLG00000028894	-	100	66.143	ENSPNYG00000012379	-	87	66.208	Pundamilia_nyererei
ENSORLG00000028894	-	86	69.438	ENSPNYG00000009042	si:ch1073-335m2.2	85	69.438	Pundamilia_nyererei
ENSORLG00000028894	-	100	48.294	ENSPNAG00000020795	spen	87	48.492	Pygocentrus_nattereri
ENSORLG00000028894	-	100	40.293	ENSPNAG00000011452	si:ch1073-335m2.2	72	35.954	Pygocentrus_nattereri
ENSORLG00000028894	-	59	77.665	ENSRNOG00000033556	Spen	81	77.665	Rattus_norvegicus
ENSORLG00000028894	-	85	77.157	ENSRBIG00000039654	SPEN	76	77.157	Rhinopithecus_bieti
ENSORLG00000028894	-	85	77.157	ENSRROG00000035686	SPEN	77	77.157	Rhinopithecus_roxellana
ENSORLG00000028894	-	70	67.391	ENSSHAG00000004960	SPEN	88	67.391	Sarcophilus_harrisii
ENSORLG00000028894	-	100	47.887	ENSSFOG00015010267	si:ch1073-335m2.2	87	48.261	Scleropages_formosus
ENSORLG00000028894	-	99	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	49.845	Scleropages_formosus
ENSORLG00000028894	-	100	37.512	ENSSMAG00000000125	si:ch1073-335m2.2	88	37.961	Scophthalmus_maximus
ENSORLG00000028894	-	100	65.728	ENSSMAG00000008996	-	87	65.728	Scophthalmus_maximus
ENSORLG00000028894	-	90	68.539	ENSSDUG00000008416	si:ch1073-335m2.2	78	45.868	Seriola_dumerili
ENSORLG00000028894	-	100	66.816	ENSSDUG00000003476	-	89	66.912	Seriola_dumerili
ENSORLG00000028894	-	81	68.539	ENSSLDG00000023347	si:ch1073-335m2.2	74	45.990	Seriola_lalandi_dorsalis
ENSORLG00000028894	-	100	66.624	ENSSLDG00000012950	-	87	66.816	Seriola_lalandi_dorsalis
ENSORLG00000028894	-	100	40.315	ENSSPUG00000001866	-	100	40.405	Sphenodon_punctatus
ENSORLG00000028894	-	100	68.408	ENSSPAG00000006014	-	87	68.376	Stegastes_partitus
ENSORLG00000028894	-	86	38.262	ENSSSCG00000034484	SPEN	75	40.954	Sus_scrofa
ENSORLG00000028894	-	100	60.742	ENSTRUG00000024350	-	87	60.838	Takifugu_rubripes
ENSORLG00000028894	-	68	45.106	ENSTRUG00000021008	si:ch1073-335m2.2	74	35.828	Takifugu_rubripes
ENSORLG00000028894	-	96	83.937	ENSTNIG00000010907	-	88	83.937	Tetraodon_nigroviridis
ENSORLG00000028894	-	77	69.585	ENSTNIG00000014666	si:ch1073-335m2.2	72	32.754	Tetraodon_nigroviridis
ENSORLG00000028894	-	63	77.000	ENSTBEG00000003628	SPEN	54	77.000	Tupaia_belangeri
ENSORLG00000028894	-	70	77.665	ENSTTRG00000015704	SPEN	58	77.665	Tursiops_truncatus
ENSORLG00000028894	-	92	82.222	ENSUAMG00000009600	SPEN	67	82.222	Ursus_americanus
ENSORLG00000028894	-	92	81.667	ENSVVUG00000028951	SPEN	75	81.667	Vulpes_vulpes
ENSORLG00000028894	-	100	37.209	ENSXCOG00000004516	si:ch1073-335m2.2	87	39.709	Xiphophorus_couchianus
ENSORLG00000028894	-	100	37.166	ENSXMAG00000029887	si:ch1073-335m2.2	87	38.396	Xiphophorus_maculatus
ENSORLG00000028894	-	100	64.989	ENSXMAG00000021384	-	87	64.957	Xiphophorus_maculatus