EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000028917 (Gene tree)
Gene ID: 101167186
Gene Symbol: -
Alias: -
Full Name: pollen-specific leucine-rich repeat extensin-like protein 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 11983 bases
Position: chr7:30181275-30193257
Accession: 101167186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000033685	MBD	PF01429.19	9.4e-13	1	1
ENSORLP00000045247	MBD	PF01429.19	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000039294	-	2898	XM_011473015	ENSORLP00000033685	965 (aa)	XP_011471317	UPI0005CC7584
ENSORLT00000033095	-	3015	-	ENSORLP00000045247	1004 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028917	-	100	52.170	ENSAOCG00000011591	-	100	50.582	Amphiprion_ocellaris
ENSORLG00000028917	-	100	50.463	ENSATEG00000019486	mecp2	100	51.619	Anabas_testudineus
ENSORLG00000028917	-	100	52.381	ENSACLG00000013679	-	100	52.359	Astatotilapia_calliptera
ENSORLG00000028917	-	100	45.111	ENSCSEG00000017325	-	100	45.900	Cynoglossus_semilaevis
ENSORLG00000028917	-	85	50.406	ENSCVAG00000001916	-	87	49.145	Cyprinodon_variegatus
ENSORLG00000028917	-	84	50.978	ENSFHEG00000017782	-	93	52.784	Fundulus_heteroclitus
ENSORLG00000028917	-	72	51.539	ENSGAFG00000020090	mecp2	100	53.059	Gambusia_affinis
ENSORLG00000028917	-	76	48.642	ENSHCOG00000015950	mecp2	100	44.101	Hippocampus_comes
ENSORLG00000028917	-	100	51.344	ENSKMAG00000014971	-	100	50.409	Kryptolebias_marmoratus
ENSORLG00000028917	-	100	47.838	ENSLBEG00000012591	-	100	50.321	Labrus_bergylta
ENSORLG00000028917	-	100	53.364	ENSMAMG00000011796	mecp2	100	53.724	Mastacembelus_armatus
ENSORLG00000028917	-	100	52.474	ENSMZEG00005026761	-	100	52.451	Maylandia_zebra
ENSORLG00000028917	-	100	97.720	ENSORLG00020003394	-	100	97.720	Oryzias_latipes_hni
ENSORLG00000028917	-	100	97.617	ENSORLG00015017697	-	100	97.617	Oryzias_latipes_hsok
ENSORLG00000028917	-	100	85.583	ENSOMEG00000011209	-	100	85.583	Oryzias_melastigma
ENSORLG00000028917	-	58	67.539	ENSPFOG00000002307	mecp2	100	66.582	Poecilia_formosa
ENSORLG00000028917	-	100	48.942	ENSPLAG00000013943	mecp2	100	50.000	Poecilia_latipinna
ENSORLG00000028917	-	100	49.281	ENSPMEG00000006101	mecp2	100	50.623	Poecilia_mexicana
ENSORLG00000028917	-	100	48.720	ENSPREG00000012585	mecp2	100	50.143	Poecilia_reticulata
ENSORLG00000028917	-	100	52.381	ENSPNYG00000020387	-	100	52.359	Pundamilia_nyererei
ENSORLG00000028917	-	98	49.765	ENSSMAG00000012458	-	100	51.750	Scophthalmus_maximus
ENSORLG00000028917	-	100	52.332	ENSSDUG00000019809	mecp2	100	52.134	Seriola_dumerili
ENSORLG00000028917	-	100	52.146	ENSSLDG00000006333	mecp2	100	51.948	Seriola_lalandi_dorsalis
ENSORLG00000028917	-	100	51.171	ENSXMAG00000021429	-	100	52.813	Xiphophorus_maculatus