EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000028980 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 889 bases
Position: chr3:30569759-30570647
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000029731	SM-ATX	PF14438.6	1.2e-08	1	1
ENSORLP00000029731	LSM14	PF12701.7	4.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000039753	-	360	-	ENSORLP00000029731	119 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028980	-	78	95.699	ENSG00000257103	LSM14A	91	95.699	Homo_sapiens
ENSORLG00000028980	-	82	87.629	ENSAPEG00000012119	lsm14aa	92	88.421	Amphiprion_percula
ENSORLG00000028980	-	80	75.789	ENSANAG00000031175	-	94	75.789	Aotus_nancymaae
ENSORLG00000028980	-	78	95.699	ENSANAG00000019299	-	91	95.699	Aotus_nancymaae
ENSORLG00000028980	-	68	96.296	ENSACLG00000018221	-	84	92.941	Astatotilapia_calliptera
ENSORLG00000028980	-	78	95.699	ENSCJAG00000010360	LSM14A	91	95.699	Callithrix_jacchus
ENSORLG00000028980	-	86	77.451	ENSCCAG00000037290	-	86	80.851	Cebus_capucinus
ENSORLG00000028980	-	82	90.722	ENSCCAG00000028536	-	95	91.579	Cebus_capucinus
ENSORLG00000028980	-	82	85.567	ENSCCAG00000038098	-	92	86.022	Cebus_capucinus
ENSORLG00000028980	-	78	91.398	ENSCSEG00000021457	lsm14aa	91	91.398	Cynoglossus_semilaevis
ENSORLG00000028980	-	84	91.000	ENSDARG00000006600	lsm14aa	96	95.122	Danio_rerio
ENSORLG00000028980	-	81	93.750	ENSGAGG00000016098	-	86	95.745	Gopherus_agassizii
ENSORLG00000028980	-	82	93.814	ENSHGLG00100000160	-	75	94.737	Heterocephalus_glaber_male
ENSORLG00000028980	-	80	92.632	ENSHGLG00100017085	-	95	92.632	Heterocephalus_glaber_male
ENSORLG00000028980	-	71	86.905	ENSHCOG00000009227	-	83	86.905	Hippocampus_comes
ENSORLG00000028980	-	72	96.512	ENSHCOG00000001089	-	87	96.512	Hippocampus_comes
ENSORLG00000028980	-	81	91.667	ENSLBEG00000010487	lsm14aa	80	93.548	Labrus_bergylta
ENSORLG00000028980	-	93	86.486	ENSMZEG00005005945	-	70	96.939	Maylandia_zebra
ENSORLG00000028980	-	69	92.683	ENSMMOG00000016341	-	93	92.683	Mola_mola
ENSORLG00000028980	-	84	84.000	ENSNLEG00000034705	-	78	86.316	Nomascus_leucogenys
ENSORLG00000028980	-	100	98.319	ENSORLG00020019931	-	100	98.319	Oryzias_latipes_hni
ENSORLG00000028980	-	80	67.327	ENSORLG00015018292	-	93	67.327	Oryzias_latipes_hsok
ENSORLG00000028980	-	80	98.947	ENSOMEG00000016637	-	59	98.947	Oryzias_melastigma
ENSORLG00000028980	-	78	94.624	ENSPTRG00000040949	-	95	93.548	Pan_troglodytes
ENSORLG00000028980	-	87	87.379	ENSPMGG00000000220	lsm14aa	94	89.796	Periophthalmus_magnuspinnatus
ENSORLG00000028980	-	74	87.500	ENSPMGG00000007198	-	82	87.500	Periophthalmus_magnuspinnatus
ENSORLG00000028980	-	79	87.500	ENSPCOG00000016240	-	90	94.118	Propithecus_coquereli
ENSORLG00000028980	-	77	85.870	ENSSBOG00000021178	-	64	85.870	Saimiri_boliviensis_boliviensis
ENSORLG00000028980	-	75	80.899	ENSSBOG00000023312	-	87	80.899	Saimiri_boliviensis_boliviensis
ENSORLG00000028980	-	78	95.699	ENSSBOG00000020141	-	91	95.699	Saimiri_boliviensis_boliviensis
ENSORLG00000028980	-	65	90.909	ENSTRUG00000024267	-	53	90.909	Takifugu_rubripes
ENSORLG00000028980	-	78	95.699	ENSUAMG00000017314	LSM14A	82	94.681	Ursus_americanus
ENSORLG00000028980	-	73	70.115	ENSUMAG00000004345	-	90	70.115	Ursus_maritimus