EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000029026 (Gene tree)
Gene ID: 101171403
Gene Symbol: rad18
Alias: -
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 51510 bases
Position: chr5:2757097-2808606
Accession: 101171403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000000882	SAP	PF02037.27	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029137	-	5791	XM_004068473	ENSORLP00000040250	492 (aa)	XP_004068521	UPI0002A47A61
ENSORLT00000038659	-	5746	XM_011474646	ENSORLP00000041572	477 (aa)	XP_011472948	UPI0005CBBC1C
ENSORLT00000000883	-	1092	-	ENSORLP00000000882	363 (aa)	-	H2L525

Gene Model

Click here to download ENSORLG00000029026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029026	rad18	95	39.024	ENSG00000070950	RAD18	90	53.659	Homo_sapiens
ENSORLG00000029026	rad18	96	62.398	ENSAPOG00000005260	rad18	75	62.398	Acanthochromis_polyacanthus
ENSORLG00000029026	rad18	95	41.417	ENSAMEG00000012375	RAD18	61	41.240	Ailuropoda_melanoleuca
ENSORLG00000029026	rad18	99	64.567	ENSACIG00000020655	rad18	90	66.120	Amphilophus_citrinellus
ENSORLG00000029026	rad18	96	64.054	ENSAOCG00000004507	rad18	77	64.054	Amphiprion_ocellaris
ENSORLG00000029026	rad18	96	64.054	ENSAPEG00000016837	rad18	83	64.054	Amphiprion_percula
ENSORLG00000029026	rad18	89	41.092	ENSAPLG00000003138	RAD18	68	41.092	Anas_platyrhynchos
ENSORLG00000029026	rad18	95	40.548	ENSANAG00000033360	RAD18	69	40.270	Aotus_nancymaae
ENSORLG00000029026	rad18	96	65.041	ENSACLG00000023506	rad18	80	65.041	Astatotilapia_calliptera
ENSORLG00000029026	rad18	96	49.865	ENSAMXG00000002534	rad18	82	49.582	Astyanax_mexicanus
ENSORLG00000029026	rad18	95	40.274	ENSBTAG00000012142	RAD18	74	41.370	Bos_taurus
ENSORLG00000029026	rad18	96	40.270	ENSCJAG00000040303	RAD18	73	40.270	Callithrix_jacchus
ENSORLG00000029026	rad18	95	40.390	ENSCAFG00000005548	RAD18	68	41.530	Canis_familiaris
ENSORLG00000029026	rad18	95	40.390	ENSCAFG00020009228	RAD18	68	41.530	Canis_lupus_dingo
ENSORLG00000029026	rad18	96	40.278	ENSCHIG00000007965	RAD18	94	40.514	Capra_hircus
ENSORLG00000029026	rad18	92	40.988	ENSTSYG00000012189	RAD18	66	40.896	Carlito_syrichta
ENSORLG00000029026	rad18	91	35.735	ENSCAPG00000000356	RAD18	75	35.735	Cavia_aperea
ENSORLG00000029026	rad18	95	39.286	ENSCPOG00000013890	RAD18	69	39.286	Cavia_porcellus
ENSORLG00000029026	rad18	95	40.274	ENSCCAG00000022920	RAD18	68	40.274	Cebus_capucinus
ENSORLG00000029026	rad18	98	38.522	ENSCATG00000039277	RAD18	73	39.842	Cercocebus_atys
ENSORLG00000029026	rad18	95	38.904	ENSCLAG00000003652	RAD18	68	40.548	Chinchilla_lanigera
ENSORLG00000029026	rad18	98	39.050	ENSCSAG00000010783	RAD18	70	40.369	Chlorocebus_sabaeus
ENSORLG00000029026	rad18	94	41.444	ENSCPBG00000014787	RAD18	73	41.444	Chrysemys_picta_bellii
ENSORLG00000029026	rad18	95	39.071	ENSCANG00000007308	RAD18	68	40.437	Colobus_angolensis_palliatus
ENSORLG00000029026	rad18	96	38.172	ENSCGRG00001018154	-	76	38.172	Cricetulus_griseus_chok1gshd
ENSORLG00000029026	rad18	94	36.712	ENSCGRG00001010209	-	67	36.712	Cricetulus_griseus_chok1gshd
ENSORLG00000029026	rad18	94	36.712	ENSCGRG00000019636	-	67	36.712	Cricetulus_griseus_crigri
ENSORLG00000029026	rad18	96	38.172	ENSCGRG00000007283	-	76	38.172	Cricetulus_griseus_crigri
ENSORLG00000029026	rad18	96	59.838	ENSCSEG00000002516	rad18	75	58.011	Cynoglossus_semilaevis
ENSORLG00000029026	rad18	96	50.546	ENSDARG00000027938	rad18	79	50.546	Danio_rerio
ENSORLG00000029026	rad18	95	41.011	ENSDORG00000001099	Rad18	75	40.761	Dipodomys_ordii
ENSORLG00000029026	rad18	95	42.017	ENSEASG00005013316	RAD18	64	42.740	Equus_asinus_asinus
ENSORLG00000029026	rad18	95	42.017	ENSECAG00000010746	RAD18	66	42.740	Equus_caballus
ENSORLG00000029026	rad18	96	54.667	ENSELUG00000000733	rad18	76	54.667	Esox_lucius
ENSORLG00000029026	rad18	96	41.389	ENSFCAG00000025747	RAD18	69	41.081	Felis_catus
ENSORLG00000029026	rad18	94	41.713	ENSFALG00000013625	RAD18	75	41.713	Ficedula_albicollis
ENSORLG00000029026	rad18	95	39.891	ENSFDAG00000009907	RAD18	68	39.891	Fukomys_damarensis
ENSORLG00000029026	rad18	94	41.287	ENSGALG00000008368	RAD18	71	41.287	Gallus_gallus
ENSORLG00000029026	rad18	96	59.452	ENSGACG00000000920	rad18	77	59.452	Gasterosteus_aculeatus
ENSORLG00000029026	rad18	86	40.179	ENSGAGG00000005184	RAD18	67	40.179	Gopherus_agassizii
ENSORLG00000029026	rad18	95	40.496	ENSGGOG00000008391	RAD18	68	40.437	Gorilla_gorilla
ENSORLG00000029026	rad18	96	54.972	ENSHBUG00000013322	rad18	83	54.972	Haplochromis_burtoni
ENSORLG00000029026	rad18	82	39.375	ENSHGLG00000009196	-	94	39.375	Heterocephalus_glaber_female
ENSORLG00000029026	rad18	82	39.375	ENSHGLG00100017675	-	94	39.375	Heterocephalus_glaber_male
ENSORLG00000029026	rad18	96	51.475	ENSIPUG00000018681	rad18	80	50.000	Ictalurus_punctatus
ENSORLG00000029026	rad18	82	42.671	ENSSTOG00000004870	-	94	39.748	Ictidomys_tridecemlineatus
ENSORLG00000029026	rad18	94	41.944	ENSJJAG00000001484	Rad18	75	41.944	Jaculus_jaculus
ENSORLG00000029026	rad18	96	66.849	ENSKMAG00000020725	rad18	73	66.849	Kryptolebias_marmoratus
ENSORLG00000029026	rad18	80	41.987	ENSLACG00000018437	RAD18	94	41.083	Latimeria_chalumnae
ENSORLG00000029026	rad18	95	51.622	ENSLOCG00000010629	rad18	78	51.622	Lepisosteus_oculatus
ENSORLG00000029026	rad18	92	40.896	ENSLAFG00000004667	RAD18	68	40.896	Loxodonta_africana
ENSORLG00000029026	rad18	98	38.522	ENSMFAG00000028864	RAD18	71	39.842	Macaca_fascicularis
ENSORLG00000029026	rad18	98	38.684	ENSMMUG00000020013	RAD18	94	40.252	Macaca_mulatta
ENSORLG00000029026	rad18	98	38.684	ENSMNEG00000013464	RAD18	71	39.842	Macaca_nemestrina
ENSORLG00000029026	rad18	98	38.259	ENSMLEG00000014306	RAD18	71	39.578	Mandrillus_leucophaeus
ENSORLG00000029026	rad18	87	60.000	ENSMAMG00000023936	rad18	73	60.000	Mastacembelus_armatus
ENSORLG00000029026	rad18	96	64.499	ENSMZEG00005010577	rad18	69	64.499	Maylandia_zebra
ENSORLG00000029026	rad18	89	41.349	ENSMGAG00000010131	RAD18	68	39.884	Meleagris_gallopavo
ENSORLG00000029026	rad18	94	38.211	ENSMAUG00000020642	Rad18	75	38.211	Mesocricetus_auratus
ENSORLG00000029026	rad18	92	40.588	ENSMICG00000013536	RAD18	67	41.226	Microcebus_murinus
ENSORLG00000029026	rad18	95	39.726	ENSMOCG00000009114	Rad18	75	39.669	Microtus_ochrogaster
ENSORLG00000029026	rad18	97	61.497	ENSMMOG00000021793	rad18	98	61.497	Mola_mola
ENSORLG00000029026	rad18	96	42.049	ENSMODG00000004679	RAD18	68	42.049	Monodelphis_domestica
ENSORLG00000029026	rad18	96	40.541	MGP_CAROLIEiJ_G0028712	Rad18	96	38.838	Mus_caroli
ENSORLG00000029026	rad18	95	41.598	ENSMUSG00000030254	Rad18	96	40.683	Mus_musculus
ENSORLG00000029026	rad18	95	40.379	MGP_PahariEiJ_G0022463	Rad18	96	38.415	Mus_pahari
ENSORLG00000029026	rad18	95	40.921	MGP_SPRETEiJ_G0029740	Rad18	96	39.939	Mus_spretus
ENSORLG00000029026	rad18	95	41.880	ENSMPUG00000017063	RAD18	68	41.257	Mustela_putorius_furo
ENSORLG00000029026	rad18	96	40.811	ENSMLUG00000016494	RAD18	68	42.432	Myotis_lucifugus
ENSORLG00000029026	rad18	94	42.818	ENSNGAG00000012464	Rad18	78	42.818	Nannospalax_galili
ENSORLG00000029026	rad18	97	65.833	ENSNBRG00000004794	rad18	98	65.833	Neolamprologus_brichardi
ENSORLG00000029026	rad18	95	39.891	ENSNLEG00000003789	RAD18	69	41.257	Nomascus_leucogenys
ENSORLG00000029026	rad18	72	39.427	ENSMEUG00000003444	-	61	39.427	Notamacropus_eugenii
ENSORLG00000029026	rad18	93	39.733	ENSOPRG00000013856	RAD18	68	41.067	Ochotona_princeps
ENSORLG00000029026	rad18	82	40.984	ENSODEG00000018158	RAD18	95	39.117	Octodon_degus
ENSORLG00000029026	rad18	96	63.043	ENSONIG00000018979	rad18	79	63.043	Oreochromis_niloticus
ENSORLG00000029026	rad18	95	40.456	ENSOCUG00000000013	RAD18	68	40.274	Oryctolagus_cuniculus
ENSORLG00000029026	rad18	61	54.217	ENSOGAG00000001410	RAD18	69	39.785	Otolemur_garnettii
ENSORLG00000029026	rad18	96	39.669	ENSOARG00000007445	RAD18	69	39.946	Ovis_aries
ENSORLG00000029026	rad18	95	39.024	ENSPPAG00000035797	RAD18	68	40.710	Pan_paniscus
ENSORLG00000029026	rad18	96	41.667	ENSPPRG00000004021	RAD18	69	41.351	Panthera_pardus
ENSORLG00000029026	rad18	96	40.541	ENSPTIG00000008602	RAD18	69	41.351	Panthera_tigris_altaica
ENSORLG00000029026	rad18	98	39.050	ENSPANG00000008855	RAD18	71	40.106	Papio_anubis
ENSORLG00000029026	rad18	94	41.667	ENSPSIG00000006928	RAD18	69	41.667	Pelodiscus_sinensis
ENSORLG00000029026	rad18	96	56.145	ENSPMGG00000013294	rad18	95	61.301	Periophthalmus_magnuspinnatus
ENSORLG00000029026	rad18	95	41.192	ENSPEMG00000022129	Rad18	75	41.144	Peromyscus_maniculatus_bairdii
ENSORLG00000029026	rad18	96	44.414	ENSPCIG00000024872	RAD18	75	44.414	Phascolarctos_cinereus
ENSORLG00000029026	rad18	99	63.102	ENSPFOG00000002722	rad18	99	63.102	Poecilia_formosa
ENSORLG00000029026	rad18	96	32.240	ENSPCAG00000008229	RAD18	75	32.240	Procavia_capensis
ENSORLG00000029026	rad18	95	40.000	ENSPVAG00000012220	RAD18	69	40.710	Pteropus_vampyrus
ENSORLG00000029026	rad18	96	64.228	ENSPNYG00000006815	rad18	74	64.228	Pundamilia_nyererei
ENSORLG00000029026	rad18	95	51.596	ENSPNAG00000016082	rad18	79	51.596	Pygocentrus_nattereri
ENSORLG00000029026	rad18	96	39.840	ENSRNOG00000005907	Rad18	70	39.467	Rattus_norvegicus
ENSORLG00000029026	rad18	95	38.798	ENSRBIG00000044173	RAD18	68	39.835	Rhinopithecus_bieti
ENSORLG00000029026	rad18	95	39.344	ENSRROG00000043948	RAD18	69	40.710	Rhinopithecus_roxellana
ENSORLG00000029026	rad18	95	40.822	ENSSBOG00000008434	-	68	40.822	Saimiri_boliviensis_boliviensis
ENSORLG00000029026	rad18	94	38.567	ENSSHAG00000012472	-	84	38.567	Sarcophilus_harrisii
ENSORLG00000029026	rad18	95	52.762	ENSSFOG00015019264	rad18	72	53.591	Scleropages_formosus
ENSORLG00000029026	rad18	82	42.812	ENSSPUG00000017486	RAD18	96	42.812	Sphenodon_punctatus
ENSORLG00000029026	rad18	96	63.243	ENSSPAG00000007165	rad18	75	63.243	Stegastes_partitus
ENSORLG00000029026	rad18	96	42.105	ENSSSCG00000026158	RAD18	69	41.019	Sus_scrofa
ENSORLG00000029026	rad18	91	40.884	ENSTGUG00000010405	RAD18	74	40.884	Taeniopygia_guttata
ENSORLG00000029026	rad18	96	60.548	ENSTRUG00000003517	rad18	100	60.548	Takifugu_rubripes
ENSORLG00000029026	rad18	96	60.109	ENSTNIG00000014625	rad18	96	60.109	Tetraodon_nigroviridis
ENSORLG00000029026	rad18	95	40.625	ENSTTRG00000005034	RAD18	69	41.160	Tursiops_truncatus
ENSORLG00000029026	rad18	95	41.854	ENSUMAG00000019279	RAD18	68	41.803	Ursus_maritimus
ENSORLG00000029026	rad18	95	38.462	ENSVPAG00000002063	RAD18	74	39.071	Vicugna_pacos
ENSORLG00000029026	rad18	96	40.111	ENSVVUG00000025318	RAD18	71	41.081	Vulpes_vulpes
ENSORLG00000029026	rad18	92	40.960	ENSXETG00000033878	RAD18	89	41.111	Xenopus_tropicalis
ENSORLG00000029026	rad18	98	58.743	ENSXCOG00000020018	rad18	98	58.743	Xiphophorus_couchianus
ENSORLG00000029026	rad18	98	59.669	ENSXMAG00000001516	rad18	98	59.669	Xiphophorus_maculatus