EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029240 (Gene tree)
Gene ID: 111949012
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 1413 bases
Position: chr16:6936577-6937989
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000033030	RRM_1	PF00076.22	3.7e-61	1	4
ENSORLP00000033030	RRM_1	PF00076.22	3.7e-61	2	4
ENSORLP00000033030	RRM_1	PF00076.22	3.7e-61	3	4
ENSORLP00000033030	RRM_1	PF00076.22	3.7e-61	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000044449	-	1413	-	ENSORLP00000033030	470 (aa)	-	-

Gene Model

Click here to download ENSORLG00000029240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029240	-	99	71.134	ENSORLG00000024157	-	70	69.500
ENSORLG00000029240	-	99	92.623	ENSORLG00000030284	-	78	92.623
ENSORLG00000029240	-	60	43.103	ENSORLG00000015433	cirbpa	67	45.455
ENSORLG00000029240	-	52	31.579	ENSORLG00000005188	tardbpl	55	31.579
ENSORLG00000029240	-	93	40.000	ENSORLG00000026044	hnrnpabb	76	38.028
ENSORLG00000029240	-	99	71.591	ENSORLG00000026571	-	94	71.591
ENSORLG00000029240	-	98	31.193	ENSORLG00000028487	elavl4	76	31.193
ENSORLG00000029240	-	98	35.644	ENSORLG00000029593	MSI1	75	35.644
ENSORLG00000029240	-	98	30.275	ENSORLG00000005379	elavl3	84	30.275
ENSORLG00000029240	-	100	91.964	ENSORLG00000025015	-	73	91.964
ENSORLG00000029240	-	99	71.066	ENSORLG00000023176	-	67	69.458
ENSORLG00000029240	-	100	91.964	ENSORLG00000025332	-	73	91.964
ENSORLG00000029240	-	94	36.207	ENSORLG00000009671	msi2a	55	35.593
ENSORLG00000029240	-	90	31.193	ENSORLG00000004217	ELAVL2	83	31.193
ENSORLG00000029240	-	92	52.326	ENSORLG00000017561	hnrnpa3	55	52.023
ENSORLG00000029240	-	89	53.179	ENSORLG00000008001	-	55	52.273
ENSORLG00000029240	-	56	32.927	ENSORLG00000003593	tardbp	61	32.927
ENSORLG00000029240	-	99	72.131	ENSORLG00000027074	-	88	72.131
ENSORLG00000029240	-	96	35.714	ENSORLG00000001833	hnrnpd	81	35.714
ENSORLG00000029240	-	99	37.333	ENSORLG00000005327	hnrnpaba	73	37.333
ENSORLG00000029240	-	98	35.644	ENSORLG00000019978	-	80	35.644
ENSORLG00000029240	-	99	70.558	ENSORLG00000023542	-	69	70.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029240	-	94	52.601	ENSAPOG00000019369	-	54	52.601	Acanthochromis_polyacanthus
ENSORLG00000029240	-	97	62.778	ENSACIG00000021815	-	91	62.295	Amphilophus_citrinellus
ENSORLG00000029240	-	94	52.601	ENSAOCG00000005289	-	54	52.601	Amphiprion_ocellaris
ENSORLG00000029240	-	94	52.601	ENSAPEG00000004179	-	54	52.601	Amphiprion_percula
ENSORLG00000029240	-	94	69.565	ENSATEG00000003423	-	76	69.565	Anabas_testudineus
ENSORLG00000029240	-	89	51.149	ENSATEG00000022918	hnrnpa1a	82	50.857	Anabas_testudineus
ENSORLG00000029240	-	96	56.180	ENSACAG00000017109	-	66	53.704	Anolis_carolinensis
ENSORLG00000029240	-	89	52.874	ENSACLG00000006940	-	54	51.977	Astatotilapia_calliptera
ENSORLG00000029240	-	94	60.452	ENSAMXG00000037730	-	64	57.407	Astyanax_mexicanus
ENSORLG00000029240	-	100	60.185	ENSCSEG00000014051	-	87	60.185	Cynoglossus_semilaevis
ENSORLG00000029240	-	93	51.163	ENSCSEG00000007589	hnrnpa1a	74	47.030	Cynoglossus_semilaevis
ENSORLG00000029240	-	94	52.874	ENSCVAG00000012637	hnrnpa1a	53	52.874	Cyprinodon_variegatus
ENSORLG00000029240	-	99	50.000	ENSDARG00000011020	hnrnpa1a	51	47.396	Danio_rerio
ENSORLG00000029240	-	98	54.872	ENSDORG00000026425	-	65	54.630	Dipodomys_ordii
ENSORLG00000029240	-	94	51.445	ENSELUG00000007372	-	50	50.568	Esox_lucius
ENSORLG00000029240	-	95	60.335	ENSGMOG00000020353	-	95	60.109	Gadus_morhua
ENSORLG00000029240	-	94	51.977	ENSGAFG00000007751	-	53	51.977	Gambusia_affinis
ENSORLG00000029240	-	99	60.112	ENSGAFG00000016803	-	59	59.563	Gambusia_affinis
ENSORLG00000029240	-	94	51.445	ENSGACG00000009435	-	60	51.445	Gasterosteus_aculeatus
ENSORLG00000029240	-	89	52.874	ENSHBUG00000005647	hnrnpa1a	54	51.977	Haplochromis_burtoni
ENSORLG00000029240	-	95	63.536	ENSIPUG00000001991	-	78	64.130	Ictalurus_punctatus
ENSORLG00000029240	-	99	51.163	ENSIPUG00000002023	hnrnpa1a	78	48.020	Ictalurus_punctatus
ENSORLG00000029240	-	94	53.374	ENSIPUG00000022440	-	78	54.335	Ictalurus_punctatus
ENSORLG00000029240	-	89	52.299	ENSKMAG00000020859	-	53	52.299	Kryptolebias_marmoratus
ENSORLG00000029240	-	89	52.023	ENSLBEG00000010010	hnrnpa1a	52	52.023	Labrus_bergylta
ENSORLG00000029240	-	89	46.023	ENSMFAG00000028351	-	51	46.023	Macaca_fascicularis
ENSORLG00000029240	-	89	51.724	ENSMAMG00000007606	-	53	51.724	Mastacembelus_armatus
ENSORLG00000029240	-	89	52.874	ENSMZEG00005027173	hnrnpa1a	54	51.977	Maylandia_zebra
ENSORLG00000029240	-	89	50.867	ENSMMOG00000008251	hnrnpa1a	78	50.867	Mola_mola
ENSORLG00000029240	-	94	51.724	ENSMALG00000014091	hnrnpa1a	52	51.724	Monopterus_albus
ENSORLG00000029240	-	96	60.674	ENSMALG00000008886	-	95	60.109	Monopterus_albus
ENSORLG00000029240	-	89	52.874	ENSNBRG00000018441	-	54	51.977	Neolamprologus_brichardi
ENSORLG00000029240	-	99	70.370	ENSNBRG00000014469	-	93	70.370	Neolamprologus_brichardi
ENSORLG00000029240	-	89	53.179	ENSORLG00020006582	hnrnpa1a	82	53.179	Oryzias_latipes_hni
ENSORLG00000029240	-	100	93.404	ENSORLG00020022498	-	96	93.404	Oryzias_latipes_hni
ENSORLG00000029240	-	98	71.066	ENSORLG00020006043	-	74	70.755	Oryzias_latipes_hni
ENSORLG00000029240	-	94	52.874	ENSORLG00015022294	-	55	51.977	Oryzias_latipes_hsok
ENSORLG00000029240	-	94	52.874	ENSOMEG00000015959	-	70	48.507	Oryzias_melastigma
ENSORLG00000029240	-	96	53.488	ENSPMGG00000011804	hnrnpa1a	83	49.254	Periophthalmus_magnuspinnatus
ENSORLG00000029240	-	96	62.295	ENSPMGG00000016392	-	94	62.295	Periophthalmus_magnuspinnatus
ENSORLG00000029240	-	94	51.977	ENSPFOG00000001825	-	53	51.977	Poecilia_formosa
ENSORLG00000029240	-	94	51.977	ENSPMEG00000002425	-	53	51.977	Poecilia_mexicana
ENSORLG00000029240	-	96	70.370	ENSPNYG00000020729	-	97	70.370	Pundamilia_nyererei
ENSORLG00000029240	-	99	53.409	ENSPNAG00000021630	-	59	54.335	Pygocentrus_nattereri
ENSORLG00000029240	-	99	50.820	ENSPNAG00000007752	hnrnpa1a	82	48.792	Pygocentrus_nattereri
ENSORLG00000029240	-	94	66.071	ENSSMAG00000010279	-	94	66.071	Scophthalmus_maximus
ENSORLG00000029240	-	91	51.429	ENSSMAG00000004641	hnrnpa1a	61	48.925	Scophthalmus_maximus
ENSORLG00000029240	-	96	57.865	ENSSMAG00000010246	-	89	54.146	Scophthalmus_maximus
ENSORLG00000029240	-	95	51.667	ENSSDUG00000013908	hnrnpa1a	97	48.077	Seriola_dumerili
ENSORLG00000029240	-	96	68.519	ENSSDUG00000002431	-	88	68.519	Seriola_dumerili
ENSORLG00000029240	-	99	51.724	ENSSLDG00000003718	hnrnpa1a	93	46.667	Seriola_lalandi_dorsalis
ENSORLG00000029240	-	99	47.664	ENSSPAG00000018518	-	59	50.265	Stegastes_partitus
ENSORLG00000029240	-	94	50.282	ENSTRUG00000020491	-	63	51.445	Takifugu_rubripes
ENSORLG00000029240	-	100	62.439	ENSTNIG00000007398	-	79	62.439	Tetraodon_nigroviridis
ENSORLG00000029240	-	94	52.299	ENSXCOG00000009001	-	90	48.768	Xiphophorus_couchianus
ENSORLG00000029240	-	89	51.412	ENSXMAG00000008076	-	52	51.412	Xiphophorus_maculatus