EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029243 (Gene tree)
Gene ID: 101162349
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8916 bases
Position: chr2:21948827-21957742
Accession: 101162349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000038415	RNase_Zc3h12a	PF11977.8	1.4e-64	1	1
ENSORLP00000030156	RNase_Zc3h12a	PF11977.8	3.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000031065	-	2418	-	ENSORLP00000038415	805 (aa)	-	-
ENSORLT00000030263	-	2415	XM_023965958	ENSORLP00000030156	804 (aa)	XP_023821726	-

Gene Model

Click here to download ENSORLG00000029243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029243	-	95	47.170	ENSORLG00000009188	-	99	39.956

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029243	-	76	70.588	ENSAPOG00000001632	-	87	67.539	Acanthochromis_polyacanthus
ENSORLG00000029243	-	77	80.757	ENSAPOG00000015355	-	82	70.370	Acanthochromis_polyacanthus
ENSORLG00000029243	-	100	67.213	ENSACIG00000001362	-	97	68.267	Amphilophus_citrinellus
ENSORLG00000029243	-	99	79.881	ENSAOCG00000003866	-	97	86.923	Amphiprion_ocellaris
ENSORLG00000029243	-	83	76.135	ENSAPEG00000018582	-	99	75.988	Amphiprion_percula
ENSORLG00000029243	-	97	82.067	ENSAPEG00000005727	-	93	88.000	Amphiprion_percula
ENSORLG00000029243	-	95	47.631	ENSATEG00000002260	-	83	79.399	Anabas_testudineus
ENSORLG00000029243	-	98	79.323	ENSATEG00000004134	-	97	71.345	Anabas_testudineus
ENSORLG00000029243	-	76	46.914	ENSACLG00000018493	-	99	40.276	Astatotilapia_calliptera
ENSORLG00000029243	-	99	79.688	ENSACLG00000027924	-	86	79.831	Astatotilapia_calliptera
ENSORLG00000029243	-	96	45.930	ENSCSEG00000008542	-	83	46.416	Cynoglossus_semilaevis
ENSORLG00000029243	-	97	71.760	ENSCSEG00000010073	-	87	84.496	Cynoglossus_semilaevis
ENSORLG00000029243	-	96	77.175	ENSCVAG00000002328	-	85	76.030	Cyprinodon_variegatus
ENSORLG00000029243	-	50	62.379	ENSEASG00005012220	ZC3H12A	51	61.661	Equus_asinus_asinus
ENSORLG00000029243	-	57	65.612	ENSELUG00000005470	-	100	45.671	Esox_lucius
ENSORLG00000029243	-	96	58.438	ENSELUG00000009319	-	95	57.035	Esox_lucius
ENSORLG00000029243	-	96	76.574	ENSFHEG00000021225	-	83	86.928	Fundulus_heteroclitus
ENSORLG00000029243	-	82	46.444	ENSGMOG00000017975	-	100	46.725	Gadus_morhua
ENSORLG00000029243	-	97	75.589	ENSGAFG00000005290	-	86	74.876	Gambusia_affinis
ENSORLG00000029243	-	82	68.787	ENSGACG00000014201	-	100	69.527	Gasterosteus_aculeatus
ENSORLG00000029243	-	82	45.821	ENSGACG00000001339	-	99	44.239	Gasterosteus_aculeatus
ENSORLG00000029243	-	99	79.447	ENSHBUG00000006831	-	99	71.344	Haplochromis_burtoni
ENSORLG00000029243	-	98	62.469	ENSHCOG00000008878	-	100	56.836	Hippocampus_comes
ENSORLG00000029243	-	99	88.636	ENSKMAG00000011694	-	86	77.778	Kryptolebias_marmoratus
ENSORLG00000029243	-	92	57.895	ENSLBEG00000012710	-	85	48.733	Labrus_bergylta
ENSORLG00000029243	-	96	79.452	ENSLBEG00000012554	-	99	79.119	Labrus_bergylta
ENSORLG00000029243	-	96	79.577	ENSLBEG00000003547	-	100	69.330	Labrus_bergylta
ENSORLG00000029243	-	95	50.122	ENSMAMG00000020372	-	99	40.971	Mastacembelus_armatus
ENSORLG00000029243	-	99	74.029	ENSMAMG00000021794	-	94	86.928	Mastacembelus_armatus
ENSORLG00000029243	-	73	55.357	ENSMZEG00005019137	-	90	67.742	Maylandia_zebra
ENSORLG00000029243	-	99	79.688	ENSMZEG00005007718	-	86	79.831	Maylandia_zebra
ENSORLG00000029243	-	97	77.546	ENSMMOG00000005728	-	99	77.312	Mola_mola
ENSORLG00000029243	-	68	47.394	ENSMMOG00000019526	-	93	41.099	Mola_mola
ENSORLG00000029243	-	99	76.478	ENSMALG00000010501	-	86	76.570	Monopterus_albus
ENSORLG00000029243	-	73	55.357	ENSNBRG00000012175	-	90	67.742	Neolamprologus_brichardi
ENSORLG00000029243	-	99	79.567	ENSNBRG00000006978	-	94	77.778	Neolamprologus_brichardi
ENSORLG00000029243	-	99	79.137	ENSONIG00000012268	-	100	76.366	Oreochromis_niloticus
ENSORLG00000029243	-	99	99.000	ENSORLG00020017005	-	88	99.000	Oryzias_latipes_hni
ENSORLG00000029243	-	99	96.875	ENSORLG00015015211	-	88	96.875	Oryzias_latipes_hsok
ENSORLG00000029243	-	99	90.211	ENSOMEG00000006666	-	100	77.838	Oryzias_melastigma
ENSORLG00000029243	-	66	59.062	ENSPMGG00000020126	-	50	59.041	Periophthalmus_magnuspinnatus
ENSORLG00000029243	-	72	79.667	ENSPMGG00000009790	-	94	79.605	Periophthalmus_magnuspinnatus
ENSORLG00000029243	-	50	61.321	ENSPEMG00000024080	Zc3h12a	52	62.821	Peromyscus_maniculatus_bairdii
ENSORLG00000029243	-	99	79.545	ENSPLAG00000009867	-	100	64.637	Poecilia_latipinna
ENSORLG00000029243	-	92	58.537	ENSPMEG00000011676	-	88	58.537	Poecilia_mexicana
ENSORLG00000029243	-	98	75.333	ENSPMEG00000006624	-	100	64.530	Poecilia_mexicana
ENSORLG00000029243	-	99	79.545	ENSPREG00000010838	-	100	64.706	Poecilia_reticulata
ENSORLG00000029243	-	95	47.506	ENSPREG00000001607	-	73	76.419	Poecilia_reticulata
ENSORLG00000029243	-	96	80.601	ENSSMAG00000007545	-	100	65.417	Scophthalmus_maximus
ENSORLG00000029243	-	90	63.889	ENSSMAG00000007258	-	87	63.889	Scophthalmus_maximus
ENSORLG00000029243	-	91	61.111	ENSSDUG00000013237	-	89	64.000	Seriola_dumerili
ENSORLG00000029243	-	99	78.199	ENSSDUG00000021864	-	86	78.452	Seriola_dumerili
ENSORLG00000029243	-	97	79.853	ENSSLDG00000012268	-	87	77.400	Seriola_lalandi_dorsalis
ENSORLG00000029243	-	91	61.111	ENSSLDG00000004886	-	87	61.111	Seriola_lalandi_dorsalis
ENSORLG00000029243	-	97	80.760	ENSSPAG00000009485	-	86	79.570	Stegastes_partitus
ENSORLG00000029243	-	96	50.122	ENSSPAG00000001850	-	99	41.553	Stegastes_partitus
ENSORLG00000029243	-	96	75.662	ENSTRUG00000022519	-	86	73.382	Takifugu_rubripes
ENSORLG00000029243	-	84	67.583	ENSTNIG00000014519	-	89	89.316	Tetraodon_nigroviridis
ENSORLG00000029243	-	97	76.025	ENSXMAG00000027171	-	86	75.528	Xiphophorus_maculatus
ENSORLG00000029243	-	97	46.429	ENSXMAG00000014715	-	83	77.922	Xiphophorus_maculatus