EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000029390 (Gene tree)
Gene ID: 101158689
Gene Symbol: mbd1b
Alias: -
Full Name: uncharacterized LOC101158689
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 19262 bases
Position: chr5:26438569-26457830
Accession: 101158689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000030185	MBD	PF01429.19	6.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000030470	-	6832	XM_004069229	ENSORLP00000030185	829 (aa)	XP_004069277	UPI0002A478DA

Gene Model

Click here to download ENSORLG00000029390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029390	mbd1b	99	65.988	ENSAPOG00000012810	mbd1b	99	66.347	Acanthochromis_polyacanthus
ENSORLG00000029390	mbd1b	87	76.974	ENSACIG00000010590	mbd1b	99	56.512	Amphilophus_citrinellus
ENSORLG00000029390	mbd1b	99	66.946	ENSAOCG00000020272	mbd1b	99	67.545	Amphiprion_ocellaris
ENSORLG00000029390	mbd1b	99	66.866	ENSAPEG00000023230	mbd1b	99	67.584	Amphiprion_percula
ENSORLG00000029390	mbd1b	99	67.260	ENSATEG00000009608	mbd1b	99	67.180	Anabas_testudineus
ENSORLG00000029390	mbd1b	99	66.276	ENSACLG00000021383	mbd1b	99	66.276	Astatotilapia_calliptera
ENSORLG00000029390	mbd1b	97	56.330	ENSCSEG00000009082	mbd1b	99	56.098	Cynoglossus_semilaevis
ENSORLG00000029390	mbd1b	99	62.708	ENSCVAG00000001167	mbd1b	99	62.840	Cyprinodon_variegatus
ENSORLG00000029390	mbd1b	92	35.897	ENSDARG00000025699	mbd1b	80	35.424	Danio_rerio
ENSORLG00000029390	mbd1b	98	44.005	ENSELUG00000004375	mbd1b	96	43.488	Esox_lucius
ENSORLG00000029390	mbd1b	99	61.621	ENSFHEG00000020120	mbd1b	99	61.712	Fundulus_heteroclitus
ENSORLG00000029390	mbd1b	99	62.619	ENSGAFG00000008975	mbd1b	99	62.813	Gambusia_affinis
ENSORLG00000029390	mbd1b	79	50.720	ENSGACG00000012106	-	99	50.941	Gasterosteus_aculeatus
ENSORLG00000029390	mbd1b	99	66.511	ENSHBUG00000014270	mbd1b	99	66.511	Haplochromis_burtoni
ENSORLG00000029390	mbd1b	98	53.567	ENSHCOG00000009952	mbd1b	99	53.995	Hippocampus_comes
ENSORLG00000029390	mbd1b	92	36.319	ENSIPUG00000015243	-	94	35.149	Ictalurus_punctatus
ENSORLG00000029390	mbd1b	99	63.604	ENSKMAG00000020760	mbd1b	99	63.679	Kryptolebias_marmoratus
ENSORLG00000029390	mbd1b	83	31.421	ENSLACG00000002414	-	56	58.462	Latimeria_chalumnae
ENSORLG00000029390	mbd1b	52	56.923	ENSMMUG00000009050	MBD1	72	30.383	Macaca_mulatta
ENSORLG00000029390	mbd1b	77	65.138	ENSMAMG00000023341	-	96	66.614	Mastacembelus_armatus
ENSORLG00000029390	mbd1b	99	66.393	ENSMZEG00005010421	mbd1b	99	66.393	Maylandia_zebra
ENSORLG00000029390	mbd1b	81	87.037	ENSMMOG00000011607	mbd1b	83	87.037	Mola_mola
ENSORLG00000029390	mbd1b	99	64.970	ENSMALG00000007808	mbd1b	100	64.976	Monopterus_albus
ENSORLG00000029390	mbd1b	99	66.042	ENSONIG00000020289	mbd1b	99	66.042	Oreochromis_niloticus
ENSORLG00000029390	mbd1b	100	98.552	ENSORLG00020000575	mbd1b	100	98.552	Oryzias_latipes_hni
ENSORLG00000029390	mbd1b	100	98.916	ENSORLG00015014812	mbd1b	100	98.916	Oryzias_latipes_hsok
ENSORLG00000029390	mbd1b	100	87.219	ENSOMEG00000023660	mbd1b	100	87.219	Oryzias_melastigma
ENSORLG00000029390	mbd1b	99	62.336	ENSPFOG00000007511	mbd1b	99	62.679	Poecilia_formosa
ENSORLG00000029390	mbd1b	99	62.455	ENSPLAG00000021258	mbd1b	99	62.321	Poecilia_latipinna
ENSORLG00000029390	mbd1b	99	61.979	ENSPMEG00000024145	mbd1b	99	62.440	Poecilia_mexicana
ENSORLG00000029390	mbd1b	99	62.500	ENSPREG00000021805	mbd1b	99	62.963	Poecilia_reticulata
ENSORLG00000029390	mbd1b	92	40.024	ENSPNAG00000018075	mbd1b	92	37.515	Pygocentrus_nattereri
ENSORLG00000029390	mbd1b	63	52.795	ENSSFOG00015008591	-	64	52.795	Scleropages_formosus
ENSORLG00000029390	mbd1b	92	68.333	ENSSMAG00000014640	mbd1b	81	69.060	Scophthalmus_maximus
ENSORLG00000029390	mbd1b	90	71.503	ENSSDUG00000012996	mbd1b	93	68.187	Seriola_dumerili
ENSORLG00000029390	mbd1b	72	77.922	ENSSLDG00000012422	mbd1b	93	77.922	Seriola_lalandi_dorsalis
ENSORLG00000029390	mbd1b	88	80.745	ENSSPAG00000021447	mbd1b	96	80.745	Stegastes_partitus
ENSORLG00000029390	mbd1b	99	59.495	ENSTRUG00000013422	mbd1b	99	59.880	Takifugu_rubripes
ENSORLG00000029390	mbd1b	67	70.229	ENSTNIG00000007326	-	77	70.543	Tetraodon_nigroviridis
ENSORLG00000029390	mbd1b	99	61.466	ENSXMAG00000005628	mbd1b	99	61.820	Xiphophorus_maculatus