EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029473 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 787
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 2724 bases
Position: chr11:3891490-3894213
Accession: 101160082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000028920	zf-C2H2	PF00096.26	5.9e-15	1	3
ENSORLP00000028920	zf-C2H2	PF00096.26	5.9e-15	2	3
ENSORLP00000028920	zf-C2H2	PF00096.26	5.9e-15	3	3
ENSORLP00000028920	zf-met	PF12874.7	8.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029308	-	843	XM_004073912	ENSORLP00000028920	280 (aa)	XP_004073960	-

Gene Model

Click here to download ENSORLG00000029473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029473	-	73	39.683	ENSORLG00000025717	-	86	39.683
ENSORLG00000029473	-	50	40.909	ENSORLG00000028091	-	90	47.826
ENSORLG00000029473	-	71	39.326	ENSORLG00000023094	-	83	39.326
ENSORLG00000029473	-	69	35.227	ENSORLG00000029896	-	100	35.227
ENSORLG00000029473	-	51	45.763	ENSORLG00000023497	-	55	45.763
ENSORLG00000029473	-	66	38.710	ENSORLG00000007009	-	97	38.710
ENSORLG00000029473	-	70	36.905	ENSORLG00000007097	-	99	36.905
ENSORLG00000029473	-	67	35.227	ENSORLG00000027767	-	95	35.227
ENSORLG00000029473	-	68	38.095	ENSORLG00000028261	-	59	38.095
ENSORLG00000029473	-	68	40.789	ENSORLG00000007263	-	92	36.364
ENSORLG00000029473	-	66	35.227	ENSORLG00000025380	-	78	35.227
ENSORLG00000029473	-	52	35.955	ENSORLG00000001615	-	72	35.955
ENSORLG00000029473	-	79	37.500	ENSORLG00000024174	-	97	37.500
ENSORLG00000029473	-	53	37.500	ENSORLG00000023744	-	87	37.500
ENSORLG00000029473	-	69	37.500	ENSORLG00000027186	-	73	38.356
ENSORLG00000029473	-	84	37.079	ENSORLG00000001749	-	92	37.079
ENSORLG00000029473	-	66	39.535	ENSORLG00000002307	-	78	39.535
ENSORLG00000029473	-	66	36.364	ENSORLG00000027982	-	66	36.364
ENSORLG00000029473	-	69	40.449	ENSORLG00000027765	-	93	40.449
ENSORLG00000029473	-	76	44.318	ENSORLG00000026432	-	90	44.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029473	-	69	40.217	ENSAPOG00000022174	-	85	43.434	Acanthochromis_polyacanthus
ENSORLG00000029473	-	51	45.122	ENSAPOG00000005259	-	95	45.122	Acanthochromis_polyacanthus
ENSORLG00000029473	-	68	40.909	ENSACIG00000023212	-	93	40.909	Amphilophus_citrinellus
ENSORLG00000029473	-	72	43.182	ENSAPEG00000013550	-	98	43.182	Amphiprion_percula
ENSORLG00000029473	-	57	42.045	ENSACAG00000015141	-	65	42.045	Anolis_carolinensis
ENSORLG00000029473	-	67	34.568	ENSCING00000004863	zf(c2h2)-93	84	34.568	Ciona_intestinalis
ENSORLG00000029473	-	93	43.860	ENSCVAG00000002506	-	95	43.860	Cyprinodon_variegatus
ENSORLG00000029473	-	54	42.045	ENSFHEG00000005993	-	84	42.045	Fundulus_heteroclitus
ENSORLG00000029473	-	73	38.202	ENSFHEG00000013820	-	91	38.202	Fundulus_heteroclitus
ENSORLG00000029473	-	62	40.909	ENSFHEG00000003405	-	84	40.909	Fundulus_heteroclitus
ENSORLG00000029473	-	66	32.955	ENSFHEG00000013625	-	89	32.955	Fundulus_heteroclitus
ENSORLG00000029473	-	70	38.636	ENSFHEG00000016540	-	99	46.296	Fundulus_heteroclitus
ENSORLG00000029473	-	54	40.909	ENSFHEG00000005983	-	70	40.909	Fundulus_heteroclitus
ENSORLG00000029473	-	69	39.326	ENSFHEG00000013486	-	92	39.326	Fundulus_heteroclitus
ENSORLG00000029473	-	70	32.955	ENSFHEG00000013803	-	92	32.955	Fundulus_heteroclitus
ENSORLG00000029473	-	70	34.091	ENSFHEG00000013792	-	93	33.333	Fundulus_heteroclitus
ENSORLG00000029473	-	77	43.182	ENSFHEG00000013302	-	94	43.182	Fundulus_heteroclitus
ENSORLG00000029473	-	84	61.111	ENSFHEG00000021003	-	97	61.111	Fundulus_heteroclitus
ENSORLG00000029473	-	71	34.091	ENSGAFG00000014188	-	99	35.227	Gambusia_affinis
ENSORLG00000029473	-	79	35.227	ENSGAFG00000011999	-	99	37.037	Gambusia_affinis
ENSORLG00000029473	-	65	39.773	ENSHCOG00000020972	-	97	39.773	Hippocampus_comes
ENSORLG00000029473	-	69	44.318	ENSHCOG00000015438	-	66	44.318	Hippocampus_comes
ENSORLG00000029473	-	54	45.763	ENSKMAG00000020025	-	91	45.763	Kryptolebias_marmoratus
ENSORLG00000029473	-	61	46.479	ENSLACG00000017381	-	63	46.479	Latimeria_chalumnae
ENSORLG00000029473	-	59	44.048	ENSLOCG00000016466	-	71	44.048	Lepisosteus_oculatus
ENSORLG00000029473	-	56	39.773	ENSNBRG00000006757	-	77	39.773	Neolamprologus_brichardi
ENSORLG00000029473	-	71	97.015	ENSORLG00020011808	-	75	97.015	Oryzias_latipes_hni
ENSORLG00000029473	-	65	37.805	ENSORLG00020010171	-	95	37.805	Oryzias_latipes_hni
ENSORLG00000029473	-	69	42.623	ENSORLG00020010804	-	96	42.623	Oryzias_latipes_hni
ENSORLG00000029473	-	67	37.500	ENSORLG00020008891	-	85	37.500	Oryzias_latipes_hni
ENSORLG00000029473	-	70	36.364	ENSORLG00015012776	-	79	38.372	Oryzias_latipes_hsok
ENSORLG00000029473	-	69	38.636	ENSORLG00015011917	-	85	37.500	Oryzias_latipes_hsok
ENSORLG00000029473	-	71	98.492	ENSORLG00015019117	-	75	98.492	Oryzias_latipes_hsok
ENSORLG00000029473	-	66	42.045	ENSOMEG00000019379	-	93	42.045	Oryzias_melastigma
ENSORLG00000029473	-	62	43.636	ENSOMEG00000019336	-	61	43.636	Oryzias_melastigma
ENSORLG00000029473	-	74	36.232	ENSOMEG00000009568	-	94	37.500	Oryzias_melastigma
ENSORLG00000029473	-	69	36.364	ENSOMEG00000010371	-	97	36.364	Oryzias_melastigma
ENSORLG00000029473	-	51	43.243	ENSOMEG00000019179	-	84	45.312	Oryzias_melastigma
ENSORLG00000029473	-	66	35.227	ENSOMEG00000020870	-	78	42.188	Oryzias_melastigma
ENSORLG00000029473	-	79	36.364	ENSOMEG00000011566	-	98	39.773	Oryzias_melastigma
ENSORLG00000029473	-	69	39.773	ENSOMEG00000019519	-	78	47.458	Oryzias_melastigma
ENSORLG00000029473	-	89	38.636	ENSOMEG00000018691	-	95	36.364	Oryzias_melastigma
ENSORLG00000029473	-	67	37.500	ENSOMEG00000013677	-	98	37.500	Oryzias_melastigma
ENSORLG00000029473	-	67	34.091	ENSOMEG00000015103	-	88	34.091	Oryzias_melastigma
ENSORLG00000029473	-	52	36.364	ENSOMEG00000018562	-	97	36.364	Oryzias_melastigma
ENSORLG00000029473	-	51	39.506	ENSPFOG00000018774	-	81	39.506	Poecilia_formosa
ENSORLG00000029473	-	71	36.364	ENSPFOG00000001053	-	99	42.045	Poecilia_formosa
ENSORLG00000029473	-	71	48.438	ENSPFOG00000007333	-	97	48.438	Poecilia_formosa
ENSORLG00000029473	-	60	73.864	ENSPFOG00000021869	-	79	73.864	Poecilia_formosa
ENSORLG00000029473	-	94	37.500	ENSPLAG00000008529	-	98	38.636	Poecilia_latipinna
ENSORLG00000029473	-	67	36.047	ENSPMEG00000020833	-	96	36.047	Poecilia_mexicana
ENSORLG00000029473	-	70	35.227	ENSPREG00000013780	-	89	35.227	Poecilia_reticulata
ENSORLG00000029473	-	67	36.667	ENSXCOG00000003493	-	97	36.667	Xiphophorus_couchianus
ENSORLG00000029473	-	55	39.535	ENSXCOG00000003530	-	81	40.323	Xiphophorus_couchianus
ENSORLG00000029473	-	71	42.529	ENSXMAG00000028978	-	94	42.529	Xiphophorus_maculatus