EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029559 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 9155 bases
Position: chr16:7718738-7727892
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000044534	RVT_1	PF00078.27	2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000035976	-	1194	-	ENSORLP00000044534	397 (aa)	-	-

Gene Model

Click here to download ENSORLG00000029559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029559	-	61	36.585	ENSORLG00000028976	-	64	38.866
ENSORLG00000029559	-	72	33.221	ENSORLG00000028706	-	60	33.221
ENSORLG00000029559	-	77	36.570	ENSORLG00000028454	-	98	36.570
ENSORLG00000029559	-	90	31.622	ENSORLG00000024236	-	97	31.622
ENSORLG00000029559	-	95	33.247	ENSORLG00000022016	-	71	33.247
ENSORLG00000029559	-	75	36.184	ENSORLG00000023713	-	77	36.184
ENSORLG00000029559	-	71	34.459	ENSORLG00000024329	-	54	34.459
ENSORLG00000029559	-	63	33.205	ENSORLG00000029764	-	98	33.205
ENSORLG00000029559	-	62	34.884	ENSORLG00000028858	-	61	34.884
ENSORLG00000029559	-	51	30.769	ENSORLG00000029683	-	55	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029559	-	64	36.122	ENSACLG00000006900	-	72	36.260	Astatotilapia_calliptera
ENSORLG00000029559	-	95	33.668	ENSDARG00000086849	si:dkey-187k19.2	69	33.668	Danio_rerio
ENSORLG00000029559	-	66	38.596	ENSEBUG00000005774	-	84	38.596	Eptatretus_burgeri
ENSORLG00000029559	-	86	40.290	ENSHBUG00000020868	-	84	40.290	Haplochromis_burtoni
ENSORLG00000029559	-	69	36.957	ENSKMAG00000007124	-	56	36.957	Kryptolebias_marmoratus
ENSORLG00000029559	-	69	35.315	ENSKMAG00000001475	-	51	35.315	Kryptolebias_marmoratus
ENSORLG00000029559	-	75	38.235	ENSLBEG00000018239	-	100	38.235	Labrus_bergylta
ENSORLG00000029559	-	68	41.577	ENSLOCG00000018030	-	77	41.577	Lepisosteus_oculatus
ENSORLG00000029559	-	58	37.975	ENSLOCG00000017441	-	69	37.975	Lepisosteus_oculatus
ENSORLG00000029559	-	63	34.981	ENSONIG00000020426	-	74	34.981	Oreochromis_niloticus
ENSORLG00000029559	-	95	35.264	ENSORLG00015017584	-	56	35.264	Oryzias_latipes_hsok
ENSORLG00000029559	-	91	33.333	ENSPFOG00000023623	-	54	33.333	Poecilia_formosa
ENSORLG00000029559	-	56	33.184	ENSPFOG00000022364	-	78	33.184	Poecilia_formosa
ENSORLG00000029559	-	91	36.785	ENSPLAG00000021304	-	86	36.785	Poecilia_latipinna
ENSORLG00000029559	-	91	36.785	ENSPMEG00000021732	-	89	36.785	Poecilia_mexicana
ENSORLG00000029559	-	79	37.736	ENSPMEG00000005418	-	83	37.736	Poecilia_mexicana
ENSORLG00000029559	-	76	35.082	ENSSFOG00015015726	-	97	35.082	Scleropages_formosus
ENSORLG00000029559	-	76	36.977	ENSSLDG00000000237	-	97	36.977	Seriola_lalandi_dorsalis
ENSORLG00000029559	-	90	37.772	ENSXCOG00000012075	-	87	37.772	Xiphophorus_couchianus
ENSORLG00000029559	-	91	36.785	ENSXMAG00000020872	-	81	36.785	Xiphophorus_maculatus
ENSORLG00000029559	-	91	36.885	ENSXMAG00000028317	-	81	36.885	Xiphophorus_maculatus