EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3744 bases
Position: chr5:4206630-4210373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036299	RVT_1	PF00078.27	3.6e-49	1	1
ENSORLP00000036299	Exo_endo_phos	PF03372.23	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000031403	-	3744	-	ENSORLP00000036299	1247 (aa)	-	-

Gene Model

Click here to download ENSORLG00000029560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029560	-	67	92.601	ENSORLG00000028313	-	99	92.601
ENSORLG00000029560	-	100	57.040	ENSORLG00000025420	-	100	57.040
ENSORLG00000029560	-	69	92.281	ENSORLG00000025323	-	100	92.281
ENSORLG00000029560	-	88	91.924	ENSORLG00000024921	-	100	91.924
ENSORLG00000029560	-	85	98.965	ENSORLG00000024526	-	99	98.965
ENSORLG00000029560	-	100	98.717	ENSORLG00000029461	-	100	98.717
ENSORLG00000029560	-	65	98.758	ENSORLG00000025476	-	98	98.758
ENSORLG00000029560	-	99	98.049	ENSORLG00000029348	-	100	98.049
ENSORLG00000029560	-	100	57.040	ENSORLG00000026691	-	100	57.040
ENSORLG00000029560	-	71	35.129	ENSORLG00000023409	-	96	35.129
ENSORLG00000029560	-	98	33.387	ENSORLG00000027914	-	98	33.387
ENSORLG00000029560	-	69	98.947	ENSORLG00000024437	-	100	98.947
ENSORLG00000029560	-	73	30.603	ENSORLG00000030600	-	77	30.603
ENSORLG00000029560	-	100	91.740	ENSORLG00000025057	-	100	91.740
ENSORLG00000029560	-	100	98.717	ENSORLG00000022606	-	100	98.717
ENSORLG00000029560	-	99	35.726	ENSORLG00000027370	-	98	35.726
ENSORLG00000029560	-	100	98.797	ENSORLG00000022264	-	100	98.797
ENSORLG00000029560	-	82	91.699	ENSORLG00000028439	-	99	91.699
ENSORLG00000029560	-	99	35.443	ENSORLG00000026117	-	98	35.443
ENSORLG00000029560	-	100	98.877	ENSORLG00000028545	-	100	98.877
ENSORLG00000029560	-	100	98.877	ENSORLG00000028541	-	100	98.877
ENSORLG00000029560	-	100	98.717	ENSORLG00000022925	-	100	98.717
ENSORLG00000029560	-	96	98.998	ENSORLG00000027152	-	100	98.998
ENSORLG00000029560	-	100	91.740	ENSORLG00000025803	-	100	91.740
ENSORLG00000029560	-	77	99.057	ENSORLG00000029491	-	100	99.057
ENSORLG00000029560	-	100	91.660	ENSORLG00000030174	-	97	91.660
ENSORLG00000029560	-	86	94.610	ENSORLG00000021840	-	100	94.610
ENSORLG00000029560	-	77	58.524	ENSORLG00000023016	-	99	58.524
ENSORLG00000029560	-	97	33.767	ENSORLG00000023283	-	84	33.767
ENSORLG00000029560	-	63	93.734	ENSORLG00000025260	-	100	93.734
ENSORLG00000029560	-	100	91.981	ENSORLG00000025213	-	100	91.981
ENSORLG00000029560	-	65	39.237	ENSORLG00000023604	-	99	39.237
ENSORLG00000029560	-	60	33.766	ENSORLG00000023193	-	89	34.076
ENSORLG00000029560	-	65	93.043	ENSORLG00000025901	-	100	93.043
ENSORLG00000029560	-	100	91.339	ENSORLG00000022453	-	100	91.339
ENSORLG00000029560	-	100	91.099	ENSORLG00000022458	-	100	91.099
ENSORLG00000029560	-	72	92.539	ENSORLG00000029308	-	99	92.539
ENSORLG00000029560	-	100	91.179	ENSORLG00000027879	-	100	91.179
ENSORLG00000029560	-	96	31.286	ENSORLG00000024310	-	96	31.286
ENSORLG00000029560	-	100	99.038	ENSORLG00000024212	-	100	99.038
ENSORLG00000029560	-	78	34.237	ENSORLG00000026511	-	98	34.237
ENSORLG00000029560	-	97	91.674	ENSORLG00000023962	-	98	91.674
ENSORLG00000029560	-	92	99.037	ENSORLG00000027333	-	99	99.037
ENSORLG00000029560	-	100	56.880	ENSORLG00000029798	-	100	56.880
ENSORLG00000029560	-	100	99.118	ENSORLG00000028057	-	100	99.118
ENSORLG00000029560	-	100	91.580	ENSORLG00000022848	-	100	91.580
ENSORLG00000029560	-	100	98.877	ENSORLG00000026574	-	100	98.877
ENSORLG00000029560	-	68	92.949	ENSORLG00000028121	-	100	92.949
ENSORLG00000029560	-	100	98.957	ENSORLG00000028129	-	100	98.957
ENSORLG00000029560	-	100	91.660	ENSORLG00000024230	-	100	91.660
ENSORLG00000029560	-	83	58.574	ENSORLG00000022093	-	100	58.574
ENSORLG00000029560	-	63	93.359	ENSORLG00000023575	-	100	93.359
ENSORLG00000029560	-	69	34.410	ENSORLG00000024714	-	97	34.410
ENSORLG00000029560	-	86	98.885	ENSORLG00000025613	-	99	98.885
ENSORLG00000029560	-	51	63.411	ENSORLG00000027405	-	72	63.369
ENSORLG00000029560	-	86	94.610	ENSORLG00000024415	-	100	94.610
ENSORLG00000029560	-	70	37.903	ENSORLG00000016964	-	69	37.903
ENSORLG00000029560	-	97	98.015	ENSORLG00000023192	-	97	98.015
ENSORLG00000029560	-	74	95.680	ENSORLG00000024972	-	98	95.680
ENSORLG00000029560	-	85	91.366	ENSORLG00000027816	-	100	91.366
ENSORLG00000029560	-	86	98.885	ENSORLG00000027031	-	100	98.885
ENSORLG00000029560	-	99	33.648	ENSORLG00000027601	-	99	33.648
ENSORLG00000029560	-	94	34.108	ENSORLG00000022346	-	98	34.108
ENSORLG00000029560	-	86	91.729	ENSORLG00000027515	-	100	91.729
ENSORLG00000029560	-	100	99.038	ENSORLG00000023904	-	100	99.038
ENSORLG00000029560	-	91	91.408	ENSORLG00000025887	-	97	91.408
ENSORLG00000029560	-	80	33.236	ENSORLG00000027244	-	99	33.236
ENSORLG00000029560	-	63	36.010	ENSORLG00000030415	-	99	36.010
ENSORLG00000029560	-	77	99.266	ENSORLG00000026019	-	100	99.266
ENSORLG00000029560	-	100	99.198	ENSORLG00000024335	-	100	99.198
ENSORLG00000029560	-	71	30.531	ENSORLG00000024817	-	93	30.531
ENSORLG00000029560	-	60	99.070	ENSORLG00000027545	-	94	99.070
ENSORLG00000029560	-	99	30.438	ENSORLG00000029419	-	98	30.438
ENSORLG00000029560	-	98	98.369	ENSORLG00000023842	-	100	98.369
ENSORLG00000029560	-	67	95.813	ENSORLG00000022464	-	100	95.813
ENSORLG00000029560	-	100	98.316	ENSORLG00000027430	-	100	98.316
ENSORLG00000029560	-	97	92.027	ENSORLG00000025676	-	99	92.027
ENSORLG00000029560	-	100	91.740	ENSORLG00000026236	-	100	91.740
ENSORLG00000029560	-	99	99.349	ENSORLG00000022241	-	100	99.349
ENSORLG00000029560	-	100	91.981	ENSORLG00000022242	-	100	91.981
ENSORLG00000029560	-	100	93.745	ENSORLG00000025984	-	100	93.745
ENSORLG00000029560	-	98	33.549	ENSORLG00000029532	-	99	33.549
ENSORLG00000029560	-	78	30.261	ENSORLG00000027316	-	78	30.261
ENSORLG00000029560	-	77	94.759	ENSORLG00000030529	-	100	94.759
ENSORLG00000029560	-	69	99.064	ENSORLG00000026318	-	100	99.064
ENSORLG00000029560	-	69	96.752	ENSORLG00000027043	-	97	96.752
ENSORLG00000029560	-	99	91.977	ENSORLG00000026409	-	100	91.977
ENSORLG00000029560	-	51	94.286	ENSORLG00000029071	-	94	94.286
ENSORLG00000029560	-	100	98.797	ENSORLG00000030319	-	100	98.797
ENSORLG00000029560	-	85	97.936	ENSORLG00000027755	-	99	97.936
ENSORLG00000029560	-	65	98.650	ENSORLG00000029714	-	96	98.650
ENSORLG00000029560	-	99	91.828	ENSORLG00000025035	-	99	91.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029560	-	99	50.315	ENSAPEG00000024005	-	99	50.315	Amphiprion_percula
ENSORLG00000029560	-	54	31.295	ENSACAG00000029370	-	88	31.295	Anolis_carolinensis
ENSORLG00000029560	-	59	32.404	ENSACAG00000029657	-	97	32.583	Anolis_carolinensis
ENSORLG00000029560	-	65	31.022	ENSACAG00000028658	-	91	30.290	Anolis_carolinensis
ENSORLG00000029560	-	71	30.811	ENSACAG00000028347	-	70	30.811	Anolis_carolinensis
ENSORLG00000029560	-	55	30.791	ENSACAG00000028264	-	89	30.791	Anolis_carolinensis
ENSORLG00000029560	-	99	34.014	ENSACLG00000012503	-	98	34.093	Astatotilapia_calliptera
ENSORLG00000029560	-	73	62.088	ENSACLG00000010059	-	99	62.088	Astatotilapia_calliptera
ENSORLG00000029560	-	77	61.771	ENSACLG00000009410	-	100	61.771	Astatotilapia_calliptera
ENSORLG00000029560	-	99	34.014	ENSACLG00000023207	-	98	34.093	Astatotilapia_calliptera
ENSORLG00000029560	-	99	35.435	ENSACLG00000002299	-	98	35.435	Astatotilapia_calliptera
ENSORLG00000029560	-	81	38.537	ENSACLG00000007947	-	93	38.537	Astatotilapia_calliptera
ENSORLG00000029560	-	99	34.160	ENSACLG00000019734	-	99	34.160	Astatotilapia_calliptera
ENSORLG00000029560	-	69	40.736	ENSAMXG00000042337	-	98	40.736	Astyanax_mexicanus
ENSORLG00000029560	-	80	38.264	ENSAMXG00000036080	-	88	38.264	Astyanax_mexicanus
ENSORLG00000029560	-	88	34.083	ENSDARG00000112132	BX470182.1	94	34.083	Danio_rerio
ENSORLG00000029560	-	99	35.612	ENSDARG00000100065	CU467837.1	98	35.612	Danio_rerio
ENSORLG00000029560	-	85	33.824	ENSDNOG00000032631	-	95	33.824	Dasypus_novemcinctus
ENSORLG00000029560	-	59	37.062	ENSEASG00005020069	-	81	37.062	Equus_asinus_asinus
ENSORLG00000029560	-	50	32.353	ENSEASG00005008960	-	86	32.353	Equus_asinus_asinus
ENSORLG00000029560	-	71	36.139	ENSEASG00005022910	-	79	36.139	Equus_asinus_asinus
ENSORLG00000029560	-	63	36.875	ENSEASG00005016304	-	96	36.875	Equus_asinus_asinus
ENSORLG00000029560	-	60	33.204	ENSEASG00005016488	-	99	33.204	Equus_asinus_asinus
ENSORLG00000029560	-	66	36.495	ENSEASG00005018086	-	81	36.495	Equus_asinus_asinus
ENSORLG00000029560	-	94	32.299	ENSEASG00005016911	-	92	32.299	Equus_asinus_asinus
ENSORLG00000029560	-	60	33.507	ENSEASG00005015079	-	89	33.507	Equus_asinus_asinus
ENSORLG00000029560	-	64	34.707	ENSECAG00000017913	-	96	34.707	Equus_caballus
ENSORLG00000029560	-	56	34.740	ENSECAG00000012123	-	99	34.740	Equus_caballus
ENSORLG00000029560	-	52	34.656	ENSFCAG00000044938	-	65	34.656	Felis_catus
ENSORLG00000029560	-	99	34.873	ENSKMAG00000009901	-	98	34.873	Kryptolebias_marmoratus
ENSORLG00000029560	-	83	37.132	ENSKMAG00000000374	-	97	37.132	Kryptolebias_marmoratus
ENSORLG00000029560	-	88	36.218	ENSKMAG00000016041	-	98	36.218	Kryptolebias_marmoratus
ENSORLG00000029560	-	99	34.615	ENSKMAG00000002570	-	98	34.615	Kryptolebias_marmoratus
ENSORLG00000029560	-	65	35.034	ENSLACG00000003989	-	96	35.034	Latimeria_chalumnae
ENSORLG00000029560	-	89	32.014	ENSMFAG00000021158	-	92	32.014	Macaca_fascicularis
ENSORLG00000029560	-	94	31.054	ENSMFAG00000016983	-	92	31.054	Macaca_fascicularis
ENSORLG00000029560	-	94	31.452	ENSMFAG00000021078	-	92	31.452	Macaca_fascicularis
ENSORLG00000029560	-	94	30.590	ENSMFAG00000027683	-	96	30.590	Macaca_fascicularis
ENSORLG00000029560	-	71	35.314	ENSMMUG00000043159	-	83	35.314	Macaca_mulatta
ENSORLG00000029560	-	85	31.764	ENSMMUG00000047485	-	99	31.764	Macaca_mulatta
ENSORLG00000029560	-	71	34.978	ENSMMUG00000039574	-	81	34.978	Macaca_mulatta
ENSORLG00000029560	-	99	91.245	ENSORLG00020004575	-	100	91.245	Oryzias_latipes_hni
ENSORLG00000029560	-	99	33.123	ENSORLG00020019330	-	99	33.123	Oryzias_latipes_hni
ENSORLG00000029560	-	100	93.504	ENSORLG00020011033	-	100	93.504	Oryzias_latipes_hni
ENSORLG00000029560	-	100	91.660	ENSORLG00020005656	-	100	91.660	Oryzias_latipes_hni
ENSORLG00000029560	-	100	91.419	ENSORLG00020018889	-	100	91.419	Oryzias_latipes_hni
ENSORLG00000029560	-	99	91.084	ENSORLG00020002923	-	100	91.084	Oryzias_latipes_hni
ENSORLG00000029560	-	88	31.847	ENSORLG00015011318	-	95	31.847	Oryzias_latipes_hsok
ENSORLG00000029560	-	86	31.129	ENSORLG00015010651	-	98	31.129	Oryzias_latipes_hsok
ENSORLG00000029560	-	90	35.783	ENSORLG00015003402	-	99	35.783	Oryzias_latipes_hsok
ENSORLG00000029560	-	66	96.833	ENSORLG00015002019	-	92	96.833	Oryzias_latipes_hsok
ENSORLG00000029560	-	99	35.060	ENSOMEG00000007552	-	99	35.060	Oryzias_melastigma
ENSORLG00000029560	-	94	30.692	ENSPTRG00000046661	-	92	30.692	Pan_troglodytes
ENSORLG00000029560	-	94	30.763	ENSPTRG00000051987	-	94	30.763	Pan_troglodytes
ENSORLG00000029560	-	94	31.359	ENSPTRG00000048756	-	92	31.359	Pan_troglodytes
ENSORLG00000029560	-	94	31.052	ENSPTRG00000048435	-	92	31.052	Pan_troglodytes
ENSORLG00000029560	-	94	31.689	ENSPANG00000035291	-	92	31.689	Papio_anubis
ENSORLG00000029560	-	94	31.997	ENSPANG00000035704	-	92	31.997	Papio_anubis
ENSORLG00000029560	-	94	31.517	ENSPANG00000029594	-	92	31.517	Papio_anubis
ENSORLG00000029560	-	83	31.654	ENSPMEG00000017430	-	99	31.654	Poecilia_mexicana
ENSORLG00000029560	-	80	33.333	ENSPMEG00000000819	-	98	33.333	Poecilia_mexicana
ENSORLG00000029560	-	69	30.752	ENSSPUG00000015682	-	99	30.752	Sphenodon_punctatus
ENSORLG00000029560	-	64	37.433	ENSSPUG00000006153	-	98	37.433	Sphenodon_punctatus