EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029564 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 4538 bases
Position: chr12:23900987-23905524
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000032378	RVT_1	PF00078.27	8.3e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029640	-	4538	-	ENSORLP00000032378	1026 (aa)	-	-

Gene Model

Click here to download ENSORLG00000029564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029564	-	54	49.189	ENSORLG00000022075	-	99	49.189
ENSORLG00000029564	-	52	30.249	ENSORLG00000023398	-	86	31.028
ENSORLG00000029564	-	50	49.133	ENSORLG00000026969	-	98	49.133
ENSORLG00000029564	-	58	46.912	ENSORLG00000022703	-	95	46.912
ENSORLG00000029564	-	69	45.148	ENSORLG00000030053	-	98	45.148
ENSORLG00000029564	-	90	46.861	ENSORLG00000023570	-	93	46.861
ENSORLG00000029564	-	78	46.259	ENSORLG00000026858	-	95	46.259
ENSORLG00000029564	-	65	47.392	ENSORLG00000030445	-	98	47.392
ENSORLG00000029564	-	73	47.600	ENSORLG00000025095	-	99	47.600
ENSORLG00000029564	-	64	98.926	ENSORLG00000025570	-	100	98.926
ENSORLG00000029564	-	95	45.510	ENSORLG00000028049	-	95	45.510
ENSORLG00000029564	-	50	48.940	ENSORLG00000025899	-	98	48.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029564	-	65	46.338	ENSACLG00000005489	-	99	46.487	Astatotilapia_calliptera
ENSORLG00000029564	-	69	45.352	ENSACLG00000001858	-	99	45.352	Astatotilapia_calliptera
ENSORLG00000029564	-	95	44.354	ENSACLG00000002312	-	97	44.354	Astatotilapia_calliptera
ENSORLG00000029564	-	96	46.177	ENSACLG00000016551	-	98	46.177	Astatotilapia_calliptera
ENSORLG00000029564	-	65	45.727	ENSACLG00000007954	-	99	45.727	Astatotilapia_calliptera
ENSORLG00000029564	-	72	44.744	ENSACLG00000001102	-	96	44.744	Astatotilapia_calliptera
ENSORLG00000029564	-	72	48.847	ENSKMAG00000019013	-	96	48.847	Kryptolebias_marmoratus
ENSORLG00000029564	-	53	30.616	ENSORLG00020006709	-	98	30.616	Oryzias_latipes_hni
ENSORLG00000029564	-	56	34.483	ENSORLG00020011415	-	89	35.484	Oryzias_latipes_hni
ENSORLG00000029564	-	73	48.005	ENSORLG00020011465	-	93	48.138	Oryzias_latipes_hni
ENSORLG00000029564	-	61	34.286	ENSORLG00020016931	-	88	34.286	Oryzias_latipes_hni
ENSORLG00000029564	-	60	32.206	ENSORLG00015018882	-	99	32.206	Oryzias_latipes_hsok
ENSORLG00000029564	-	96	44.388	ENSOMEG00000001762	-	98	44.388	Oryzias_melastigma
ENSORLG00000029564	-	57	46.102	ENSOMEG00000010146	-	100	45.932	Oryzias_melastigma
ENSORLG00000029564	-	56	48.193	ENSPMEG00000019493	-	99	48.193	Poecilia_mexicana
ENSORLG00000029564	-	68	46.893	ENSXMAG00000022354	-	100	46.893	Xiphophorus_maculatus