EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029602 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4612 bases
Position: chr1:23869025-23873636
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000035002	zf-CCHC	PF00098.23	0.0005	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000032374	-	1074	-	ENSORLP00000035002	357 (aa)	-	-

Gene Model

Click here to download ENSORLG00000029602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029602	-	93	62.832	ENSORLG00000027391	-	87	63.554
ENSORLG00000029602	-	97	94.253	ENSORLG00000023496	-	95	97.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029602	-	66	35.319	ENSAMXG00000036244	-	69	34.717	Astyanax_mexicanus
ENSORLG00000029602	-	90	34.234	ENSAMXG00000042165	-	89	34.234	Astyanax_mexicanus
ENSORLG00000029602	-	86	31.511	ENSFHEG00000001818	-	76	31.511	Fundulus_heteroclitus
ENSORLG00000029602	-	89	32.188	ENSHBUG00000010718	-	95	32.188	Haplochromis_burtoni
ENSORLG00000029602	-	88	35.312	ENSHCOG00000001473	-	89	35.312	Hippocampus_comes
ENSORLG00000029602	-	55	35.714	ENSLOCG00000010704	-	93	35.714	Lepisosteus_oculatus
ENSORLG00000029602	-	66	35.470	ENSMZEG00005021915	-	71	36.864	Maylandia_zebra
ENSORLG00000029602	-	86	33.010	ENSMZEG00005007727	-	91	33.010	Maylandia_zebra
ENSORLG00000029602	-	91	81.957	ENSORLG00020001780	-	88	82.663	Oryzias_latipes_hni
ENSORLG00000029602	-	95	76.696	ENSORLG00020007518	-	91	78.354	Oryzias_latipes_hni
ENSORLG00000029602	-	94	69.617	ENSORLG00020020969	-	84	70.181	Oryzias_latipes_hni
ENSORLG00000029602	-	86	35.783	ENSPREG00000001860	-	86	34.783	Poecilia_reticulata
ENSORLG00000029602	-	67	33.891	ENSPNAG00000011784	-	78	33.891	Pygocentrus_nattereri
ENSORLG00000029602	-	91	34.036	ENSPNAG00000026690	-	73	36.014	Pygocentrus_nattereri
ENSORLG00000029602	-	67	32.636	ENSPNAG00000001406	-	70	32.636	Pygocentrus_nattereri