EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000029610 (Gene tree)
Gene ID: 101165126
Gene Symbol: trmt1l
Alias: -
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 28266 bases
Position: chr4:23536637-23564902
Accession: 101165126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043779	TRM	PF02005.16	4.7e-70	1	2
ENSORLP00000043779	TRM	PF02005.16	4.7e-70	2	2
ENSORLP00000041756	TRM	PF02005.16	6.9e-70	1	2
ENSORLP00000041756	TRM	PF02005.16	6.9e-70	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000044007	-	5476	XM_023954416	ENSORLP00000041756	666 (aa)	XP_023810184	UPI0009DB5CF4
ENSORLT00000045377	-	5872	XM_023954417	ENSORLP00000043779	606 (aa)	XP_023810185	UPI000CE22471

Gene Model

Click here to download ENSORLG00000029610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029610	trmt1l	98	63.097	ENSG00000121486	TRMT1L	99	70.000	Homo_sapiens
ENSORLG00000029610	trmt1l	99	87.685	ENSAPOG00000011807	trmt1l	97	84.427	Acanthochromis_polyacanthus
ENSORLG00000029610	trmt1l	98	62.768	ENSAMEG00000013538	TRMT1L	84	62.279	Ailuropoda_melanoleuca
ENSORLG00000029610	trmt1l	80	83.707	ENSACIG00000012049	trmt1l	91	85.439	Amphilophus_citrinellus
ENSORLG00000029610	trmt1l	99	86.864	ENSAOCG00000018112	trmt1l	97	83.664	Amphiprion_ocellaris
ENSORLG00000029610	trmt1l	99	86.700	ENSAPEG00000021433	trmt1l	96	88.000	Amphiprion_percula
ENSORLG00000029610	trmt1l	99	89.752	ENSATEG00000004573	trmt1l	97	90.816	Anabas_testudineus
ENSORLG00000029610	trmt1l	95	66.667	ENSAPLG00000008394	TRMT1L	86	64.573	Anas_platyrhynchos
ENSORLG00000029610	trmt1l	99	63.295	ENSACAG00000002342	TRMT1L	85	62.880	Anolis_carolinensis
ENSORLG00000029610	trmt1l	96	64.370	ENSANAG00000038162	TRMT1L	84	62.761	Aotus_nancymaae
ENSORLG00000029610	trmt1l	99	87.092	ENSACLG00000021625	trmt1l	97	85.015	Astatotilapia_calliptera
ENSORLG00000029610	trmt1l	99	81.626	ENSAMXG00000009602	trmt1l	96	78.657	Astyanax_mexicanus
ENSORLG00000029610	trmt1l	96	63.805	ENSBTAG00000011285	TRMT1L	83	62.379	Bos_taurus
ENSORLG00000029610	trmt1l	96	64.646	ENSCJAG00000005456	TRMT1L	84	63.082	Callithrix_jacchus
ENSORLG00000029610	trmt1l	96	63.973	ENSCAFG00000013518	TRMT1L	82	62.440	Canis_familiaris
ENSORLG00000029610	trmt1l	96	63.973	ENSCAFG00020015640	TRMT1L	84	62.440	Canis_lupus_dingo
ENSORLG00000029610	trmt1l	96	63.866	ENSCHIG00000016522	TRMT1L	83	62.440	Capra_hircus
ENSORLG00000029610	trmt1l	96	63.697	ENSTSYG00000010465	TRMT1L	85	62.279	Carlito_syrichta
ENSORLG00000029610	trmt1l	78	61.660	ENSCAPG00000012562	TRMT1L	79	64.255	Cavia_aperea
ENSORLG00000029610	trmt1l	96	63.866	ENSCPOG00000001567	TRMT1L	85	62.279	Cavia_porcellus
ENSORLG00000029610	trmt1l	98	62.932	ENSCCAG00000018699	TRMT1L	84	62.279	Cebus_capucinus
ENSORLG00000029610	trmt1l	96	64.370	ENSCATG00000043114	TRMT1L	84	62.921	Cercocebus_atys
ENSORLG00000029610	trmt1l	96	64.538	ENSCLAG00000010801	-	85	63.360	Chinchilla_lanigera
ENSORLG00000029610	trmt1l	96	48.900	ENSCLAG00000010853	-	81	48.871	Chinchilla_lanigera
ENSORLG00000029610	trmt1l	96	64.370	ENSCSAG00000012880	TRMT1L	84	62.921	Chlorocebus_sabaeus
ENSORLG00000029610	trmt1l	55	69.697	ENSCHOG00000011164	TRMT1L	56	69.000	Choloepus_hoffmanni
ENSORLG00000029610	trmt1l	96	67.899	ENSCPBG00000015694	TRMT1L	86	66.077	Chrysemys_picta_bellii
ENSORLG00000029610	trmt1l	96	64.538	ENSCANG00000031107	TRMT1L	84	63.082	Colobus_angolensis_palliatus
ENSORLG00000029610	trmt1l	95	64.103	ENSCGRG00001019297	Trmt1l	84	61.637	Cricetulus_griseus_chok1gshd
ENSORLG00000029610	trmt1l	95	64.103	ENSCGRG00000005036	Trmt1l	84	61.637	Cricetulus_griseus_crigri
ENSORLG00000029610	trmt1l	99	84.653	ENSCSEG00000001248	trmt1l	97	82.067	Cynoglossus_semilaevis
ENSORLG00000029610	trmt1l	97	87.374	ENSCVAG00000012274	trmt1l	97	83.969	Cyprinodon_variegatus
ENSORLG00000029610	trmt1l	97	83.500	ENSDARG00000042057	trmt1l	91	84.103	Danio_rerio
ENSORLG00000029610	trmt1l	99	62.480	ENSDNOG00000005239	TRMT1L	84	62.058	Dasypus_novemcinctus
ENSORLG00000029610	trmt1l	95	59.354	ENSDORG00000003298	Trmt1l	84	60.746	Dipodomys_ordii
ENSORLG00000029610	trmt1l	74	67.078	ENSETEG00000015895	TRMT1L	63	73.810	Echinops_telfairi
ENSORLG00000029610	trmt1l	94	47.396	ENSEBUG00000010301	trmt1l	93	46.721	Eptatretus_burgeri
ENSORLG00000029610	trmt1l	96	61.242	ENSEASG00005005551	TRMT1L	83	59.776	Equus_asinus_asinus
ENSORLG00000029610	trmt1l	96	63.697	ENSECAG00000020999	TRMT1L	78	62.119	Equus_caballus
ENSORLG00000029610	trmt1l	88	61.593	ENSEEUG00000014110	TRMT1L	80	64.762	Erinaceus_europaeus
ENSORLG00000029610	trmt1l	99	81.773	ENSELUG00000020587	trmt1l	97	78.190	Esox_lucius
ENSORLG00000029610	trmt1l	96	63.468	ENSFCAG00000011285	TRMT1L	84	62.058	Felis_catus
ENSORLG00000029610	trmt1l	95	66.212	ENSFALG00000003177	TRMT1L	94	64.194	Ficedula_albicollis
ENSORLG00000029610	trmt1l	96	63.591	ENSFDAG00000008822	TRMT1L	85	62.440	Fukomys_damarensis
ENSORLG00000029610	trmt1l	85	91.031	ENSFHEG00000014328	trmt1l	97	91.667	Fundulus_heteroclitus
ENSORLG00000029610	trmt1l	96	81.588	ENSGMOG00000009535	trmt1l	96	81.592	Gadus_morhua
ENSORLG00000029610	trmt1l	95	65.476	ENSGALG00000033077	TRMT1L	81	63.275	Gallus_gallus
ENSORLG00000029610	trmt1l	99	85.410	ENSGAFG00000012445	trmt1l	97	83.562	Gambusia_affinis
ENSORLG00000029610	trmt1l	99	85.784	ENSGACG00000005050	trmt1l	96	86.813	Gasterosteus_aculeatus
ENSORLG00000029610	trmt1l	96	68.074	ENSGAGG00000007441	TRMT1L	81	66.032	Gopherus_agassizii
ENSORLG00000029610	trmt1l	98	63.097	ENSGGOG00000011778	TRMT1L	84	62.600	Gorilla_gorilla
ENSORLG00000029610	trmt1l	99	87.255	ENSHBUG00000000622	trmt1l	97	85.168	Haplochromis_burtoni
ENSORLG00000029610	trmt1l	92	51.496	ENSHGLG00000012595	-	88	51.786	Heterocephalus_glaber_female
ENSORLG00000029610	trmt1l	89	63.472	ENSHGLG00000003135	-	84	60.263	Heterocephalus_glaber_female
ENSORLG00000029610	trmt1l	98	62.932	ENSHGLG00100019412	-	85	62.720	Heterocephalus_glaber_male
ENSORLG00000029610	trmt1l	92	51.496	ENSHGLG00100004569	-	88	51.786	Heterocephalus_glaber_male
ENSORLG00000029610	trmt1l	97	78.608	ENSIPUG00000008873	trmt1l	98	74.574	Ictalurus_punctatus
ENSORLG00000029610	trmt1l	96	63.652	ENSSTOG00000010332	TRMT1L	84	62.240	Ictidomys_tridecemlineatus
ENSORLG00000029610	trmt1l	98	61.653	ENSJJAG00000010929	Trmt1l	87	60.828	Jaculus_jaculus
ENSORLG00000029610	trmt1l	99	82.516	ENSKMAG00000010310	trmt1l	89	85.075	Kryptolebias_marmoratus
ENSORLG00000029610	trmt1l	98	87.252	ENSLBEG00000003487	trmt1l	97	83.915	Labrus_bergylta
ENSORLG00000029610	trmt1l	89	87.956	ENSLBEG00000007982	-	100	83.495	Labrus_bergylta
ENSORLG00000029610	trmt1l	99	66.613	ENSLACG00000008447	TRMT1L	92	66.035	Latimeria_chalumnae
ENSORLG00000029610	trmt1l	97	80.066	ENSLOCG00000001781	trmt1l	96	74.554	Lepisosteus_oculatus
ENSORLG00000029610	trmt1l	99	62.378	ENSLAFG00000004339	TRMT1L	87	60.648	Loxodonta_africana
ENSORLG00000029610	trmt1l	96	64.370	ENSMFAG00000037592	TRMT1L	84	62.921	Macaca_fascicularis
ENSORLG00000029610	trmt1l	96	64.370	ENSMMUG00000013879	TRMT1L	89	62.480	Macaca_mulatta
ENSORLG00000029610	trmt1l	96	64.370	ENSMNEG00000041637	TRMT1L	84	62.921	Macaca_nemestrina
ENSORLG00000029610	trmt1l	96	64.370	ENSMLEG00000004840	TRMT1L	84	62.921	Mandrillus_leucophaeus
ENSORLG00000029610	trmt1l	97	85.473	ENSMAMG00000015305	trmt1l	99	81.636	Mastacembelus_armatus
ENSORLG00000029610	trmt1l	99	87.255	ENSMZEG00005017822	trmt1l	97	85.168	Maylandia_zebra
ENSORLG00000029610	trmt1l	95	65.646	ENSMGAG00000000930	TRMT1L	94	64.090	Meleagris_gallopavo
ENSORLG00000029610	trmt1l	95	61.356	ENSMAUG00000019870	Trmt1l	85	59.265	Mesocricetus_auratus
ENSORLG00000029610	trmt1l	98	63.756	ENSMICG00000009494	TRMT1L	84	63.082	Microcebus_murinus
ENSORLG00000029610	trmt1l	97	62.901	ENSMOCG00000016453	Trmt1l	84	61.452	Microtus_ochrogaster
ENSORLG00000029610	trmt1l	96	85.569	ENSMMOG00000016961	trmt1l	99	81.173	Mola_mola
ENSORLG00000029610	trmt1l	96	67.563	ENSMODG00000007454	TRMT1L	72	65.348	Monodelphis_domestica
ENSORLG00000029610	trmt1l	99	87.908	ENSMALG00000019306	trmt1l	97	84.932	Monopterus_albus
ENSORLG00000029610	trmt1l	96	62.944	MGP_CAROLIEiJ_G0014693	Trmt1l	84	61.389	Mus_caroli
ENSORLG00000029610	trmt1l	95	63.481	ENSMUSG00000053286	Trmt1l	84	61.514	Mus_musculus
ENSORLG00000029610	trmt1l	95	62.963	MGP_PahariEiJ_G0027929	Trmt1l	84	61.208	Mus_pahari
ENSORLG00000029610	trmt1l	79	71.111	MGP_SPRETEiJ_G0015500	Trmt1l	81	72.619	Mus_spretus
ENSORLG00000029610	trmt1l	98	59.143	ENSMPUG00000011859	TRMT1L	84	59.040	Mustela_putorius_furo
ENSORLG00000029610	trmt1l	98	64.191	ENSMLUG00000001136	TRMT1L	85	63.563	Myotis_lucifugus
ENSORLG00000029610	trmt1l	96	63.514	ENSNGAG00000011685	Trmt1l	85	62.097	Nannospalax_galili
ENSORLG00000029610	trmt1l	78	83.402	ENSNBRG00000004053	trmt1l	100	88.889	Neolamprologus_brichardi
ENSORLG00000029610	trmt1l	98	63.591	ENSNLEG00000018030	TRMT1L	84	63.082	Nomascus_leucogenys
ENSORLG00000029610	trmt1l	84	57.895	ENSMEUG00000011344	TRMT1L	79	66.667	Notamacropus_eugenii
ENSORLG00000029610	trmt1l	89	61.792	ENSOPRG00000000680	TRMT1L	82	61.878	Ochotona_princeps
ENSORLG00000029610	trmt1l	98	60.461	ENSODEG00000000826	TRMT1L	85	60.032	Octodon_degus
ENSORLG00000029610	trmt1l	99	87.745	ENSONIG00000007823	trmt1l	99	86.246	Oreochromis_niloticus
ENSORLG00000029610	trmt1l	96	65.541	ENSOANG00000001010	TRMT1L	94	64.194	Ornithorhynchus_anatinus
ENSORLG00000029610	trmt1l	96	64.358	ENSOCUG00000004896	TRMT1L	86	63.082	Oryctolagus_cuniculus
ENSORLG00000029610	trmt1l	100	99.670	ENSORLG00020002203	trmt1l	100	99.550	Oryzias_latipes_hni
ENSORLG00000029610	trmt1l	100	98.845	ENSORLG00015021512	trmt1l	100	98.498	Oryzias_latipes_hsok
ENSORLG00000029610	trmt1l	90	89.341	ENSOMEG00000016275	trmt1l	86	90.097	Oryzias_melastigma
ENSORLG00000029610	trmt1l	99	57.073	ENSOGAG00000016186	TRMT1L	94	58.416	Otolemur_garnettii
ENSORLG00000029610	trmt1l	96	63.866	ENSOARG00000003786	TRMT1L	83	62.440	Ovis_aries
ENSORLG00000029610	trmt1l	98	62.768	ENSPPAG00000029141	TRMT1L	84	62.279	Pan_paniscus
ENSORLG00000029610	trmt1l	96	63.468	ENSPPRG00000023981	TRMT1L	84	62.058	Panthera_pardus
ENSORLG00000029610	trmt1l	96	63.468	ENSPTIG00000021754	TRMT1L	84	62.058	Panthera_tigris_altaica
ENSORLG00000029610	trmt1l	98	62.768	ENSPTRG00000001776	TRMT1L	84	62.279	Pan_troglodytes
ENSORLG00000029610	trmt1l	96	62.353	ENSPANG00000020890	TRMT1L	83	60.995	Papio_anubis
ENSORLG00000029610	trmt1l	96	82.323	ENSPKIG00000005941	trmt1l	87	81.908	Paramormyrops_kingsleyae
ENSORLG00000029610	trmt1l	96	67.288	ENSPSIG00000010011	TRMT1L	90	65.539	Pelodiscus_sinensis
ENSORLG00000029610	trmt1l	89	72.630	ENSPMGG00000021359	trmt1l	95	73.166	Periophthalmus_magnuspinnatus
ENSORLG00000029610	trmt1l	99	62.131	ENSPEMG00000000031	Trmt1l	85	61.836	Peromyscus_maniculatus_bairdii
ENSORLG00000029610	trmt1l	95	58.598	ENSPMAG00000005838	trmt1l	99	57.188	Petromyzon_marinus
ENSORLG00000029610	trmt1l	99	65.309	ENSPCIG00000002409	TRMT1L	83	64.762	Phascolarctos_cinereus
ENSORLG00000029610	trmt1l	97	87.919	ENSPFOG00000003872	trmt1l	97	84.627	Poecilia_formosa
ENSORLG00000029610	trmt1l	97	87.919	ENSPLAG00000010387	trmt1l	97	84.627	Poecilia_latipinna
ENSORLG00000029610	trmt1l	99	86.557	ENSPMEG00000011828	trmt1l	97	88.605	Poecilia_mexicana
ENSORLG00000029610	trmt1l	99	86.393	ENSPREG00000002866	trmt1l	97	84.627	Poecilia_reticulata
ENSORLG00000029610	trmt1l	98	62.932	ENSPPYG00000000416	TRMT1L	84	62.440	Pongo_abelii
ENSORLG00000029610	trmt1l	87	64.637	ENSPCAG00000008257	TRMT1L	73	72.289	Procavia_capensis
ENSORLG00000029610	trmt1l	80	56.886	ENSPCOG00000005682	TRMT1L	81	44.122	Propithecus_coquereli
ENSORLG00000029610	trmt1l	84	70.312	ENSPVAG00000005961	TRMT1L	73	66.129	Pteropus_vampyrus
ENSORLG00000029610	trmt1l	98	84.859	ENSPNYG00000005607	trmt1l	96	84.167	Pundamilia_nyererei
ENSORLG00000029610	trmt1l	97	81.970	ENSPNAG00000004389	trmt1l	96	76.831	Pygocentrus_nattereri
ENSORLG00000029610	trmt1l	95	63.652	ENSRNOG00000002580	Trmt1l	84	61.874	Rattus_norvegicus
ENSORLG00000029610	trmt1l	96	64.370	ENSRBIG00000042589	TRMT1L	84	62.921	Rhinopithecus_bieti
ENSORLG00000029610	trmt1l	96	64.370	ENSRROG00000032183	TRMT1L	84	62.921	Rhinopithecus_roxellana
ENSORLG00000029610	trmt1l	98	63.756	ENSSBOG00000029282	TRMT1L	84	63.082	Saimiri_boliviensis_boliviensis
ENSORLG00000029610	trmt1l	97	82.215	ENSSFOG00015004878	trmt1l	88	82.372	Scleropages_formosus
ENSORLG00000029610	trmt1l	71	84.112	ENSSMAG00000015425	trmt1l	93	87.209	Scophthalmus_maximus
ENSORLG00000029610	trmt1l	99	90.686	ENSSDUG00000021807	trmt1l	97	92.177	Seriola_dumerili
ENSORLG00000029610	trmt1l	99	90.523	ENSSLDG00000016579	trmt1l	97	92.007	Seriola_lalandi_dorsalis
ENSORLG00000029610	trmt1l	73	63.300	ENSSARG00000010135	TRMT1L	81	63.500	Sorex_araneus
ENSORLG00000029610	trmt1l	97	67.780	ENSSPUG00000003927	TRMT1L	95	67.119	Sphenodon_punctatus
ENSORLG00000029610	trmt1l	99	88.342	ENSSPAG00000008597	trmt1l	97	85.518	Stegastes_partitus
ENSORLG00000029610	trmt1l	99	62.603	ENSSSCG00000021393	TRMT1L	79	62.440	Sus_scrofa
ENSORLG00000029610	trmt1l	95	66.327	ENSTGUG00000003737	TRMT1L	91	64.205	Taeniopygia_guttata
ENSORLG00000029610	trmt1l	98	76.190	ENSTRUG00000002396	trmt1l	96	71.284	Takifugu_rubripes
ENSORLG00000029610	trmt1l	68	80.000	ENSTNIG00000005534	trmt1l	98	80.193	Tetraodon_nigroviridis
ENSORLG00000029610	trmt1l	80	62.275	ENSTBEG00000016498	TRMT1L	72	62.733	Tupaia_belangeri
ENSORLG00000029610	trmt1l	96	61.513	ENSTTRG00000005892	TRMT1L	84	60.193	Tursiops_truncatus
ENSORLG00000029610	trmt1l	98	62.603	ENSUAMG00000020936	TRMT1L	84	62.119	Ursus_americanus
ENSORLG00000029610	trmt1l	98	62.603	ENSUMAG00000021919	TRMT1L	82	62.119	Ursus_maritimus
ENSORLG00000029610	trmt1l	96	64.034	ENSVPAG00000011854	TRMT1L	94	62.802	Vicugna_pacos
ENSORLG00000029610	trmt1l	96	63.973	ENSVVUG00000009166	TRMT1L	84	62.440	Vulpes_vulpes
ENSORLG00000029610	trmt1l	77	59.197	ENSXETG00000004539	trmt1l	93	58.452	Xenopus_tropicalis
ENSORLG00000029610	trmt1l	96	82.343	ENSXCOG00000007372	trmt1l	89	82.788	Xiphophorus_couchianus
ENSORLG00000029610	trmt1l	97	87.395	ENSXMAG00000003575	trmt1l	97	84.018	Xiphophorus_maculatus