EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029631 (Gene tree)
Gene ID: -
Gene Symbol: plod3
Alias: -
Full Name: procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 5629 bases
Position: chr18:180078-185706
Accession: ZDB-GENE-021031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000034086	2OG-FeII_Oxy	PF03171.20	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045139	-	1095	-	ENSORLP00000034086	364 (aa)	-	-

Gene Model

Click here to download ENSORLG00000029631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029631	plod3	100	63.187	ENSORLG00000018904	plod1a	50	63.187

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029631	plod3	100	69.505	ENSG00000106397	PLOD3	98	75.385	Homo_sapiens
ENSORLG00000029631	plod3	100	63.736	ENSG00000152952	PLOD2	91	60.733	Homo_sapiens
ENSORLG00000029631	plod3	99	65.565	ENSG00000083444	PLOD1	50	65.565	Homo_sapiens
ENSORLG00000029631	plod3	99	63.912	ENSAPOG00000013081	plod1a	51	61.157	Acanthochromis_polyacanthus
ENSORLG00000029631	plod3	100	90.110	ENSAPOG00000013652	plod3	50	90.110	Acanthochromis_polyacanthus
ENSORLG00000029631	plod3	100	60.519	ENSAMEG00000013650	PLOD2	50	60.519	Ailuropoda_melanoleuca
ENSORLG00000029631	plod3	100	63.462	ENSACIG00000018677	plod2	53	63.462	Amphilophus_citrinellus
ENSORLG00000029631	plod3	100	87.397	ENSACIG00000009256	plod3	50	87.397	Amphilophus_citrinellus
ENSORLG00000029631	plod3	100	89.560	ENSAOCG00000009132	plod3	50	89.560	Amphiprion_ocellaris
ENSORLG00000029631	plod3	99	63.912	ENSAOCG00000018734	plod1a	55	63.912	Amphiprion_ocellaris
ENSORLG00000029631	plod3	99	63.912	ENSAPEG00000006235	plod1a	52	63.912	Amphiprion_percula
ENSORLG00000029631	plod3	100	89.560	ENSAPEG00000020103	plod3	52	89.560	Amphiprion_percula
ENSORLG00000029631	plod3	100	60.260	ENSAPLG00000011127	PLOD2	53	60.260	Anas_platyrhynchos
ENSORLG00000029631	plod3	100	67.308	ENSAPLG00000011324	PLOD1	50	67.308	Anas_platyrhynchos
ENSORLG00000029631	plod3	100	59.221	ENSACAG00000006657	PLOD2	50	59.221	Anolis_carolinensis
ENSORLG00000029631	plod3	100	63.462	ENSANAG00000030377	PLOD2	51	60.000	Aotus_nancymaae
ENSORLG00000029631	plod3	99	66.116	ENSANAG00000026221	PLOD1	52	66.116	Aotus_nancymaae
ENSORLG00000029631	plod3	100	61.039	ENSACLG00000027422	plod2	51	61.039	Astatotilapia_calliptera
ENSORLG00000029631	plod3	100	64.286	ENSBTAG00000007331	PLOD2	54	60.779	Bos_taurus
ENSORLG00000029631	plod3	99	66.482	ENSBTAG00000002052	PLOD1	51	66.116	Bos_taurus
ENSORLG00000029631	plod3	100	63.736	ENSCJAG00000001578	PLOD2	55	63.736	Callithrix_jacchus
ENSORLG00000029631	plod3	99	65.840	ENSCJAG00000013459	PLOD1	50	65.840	Callithrix_jacchus
ENSORLG00000029631	plod3	100	60.519	ENSCAFG00000008101	PLOD2	50	60.519	Canis_familiaris
ENSORLG00000029631	plod3	100	64.011	ENSCAFG00020011739	PLOD2	50	64.011	Canis_lupus_dingo
ENSORLG00000029631	plod3	100	64.011	ENSCHIG00000018266	PLOD2	50	64.011	Capra_hircus
ENSORLG00000029631	plod3	99	66.116	ENSCHIG00000025580	PLOD1	50	66.116	Capra_hircus
ENSORLG00000029631	plod3	100	63.736	ENSTSYG00000007171	PLOD2	57	63.736	Carlito_syrichta
ENSORLG00000029631	plod3	99	66.482	ENSTSYG00000035536	PLOD1	54	66.482	Carlito_syrichta
ENSORLG00000029631	plod3	100	61.813	ENSCAPG00000010686	PLOD2	54	61.813	Cavia_aperea
ENSORLG00000029631	plod3	100	59.066	ENSCPOG00000014514	PLOD2	51	59.066	Cavia_porcellus
ENSORLG00000029631	plod3	100	63.736	ENSCCAG00000025733	PLOD2	51	60.260	Cebus_capucinus
ENSORLG00000029631	plod3	99	66.116	ENSCCAG00000024821	PLOD1	50	66.116	Cebus_capucinus
ENSORLG00000029631	plod3	100	63.462	ENSCATG00000041420	PLOD2	51	60.000	Cercocebus_atys
ENSORLG00000029631	plod3	99	61.983	ENSCATG00000017580	PLOD1	50	61.983	Cercocebus_atys
ENSORLG00000029631	plod3	100	64.286	ENSCLAG00000008696	PLOD2	50	60.779	Chinchilla_lanigera
ENSORLG00000029631	plod3	100	60.000	ENSCSAG00000011365	PLOD2	51	60.000	Chlorocebus_sabaeus
ENSORLG00000029631	plod3	100	65.110	ENSCPBG00000021958	PLOD1	50	65.110	Chrysemys_picta_bellii
ENSORLG00000029631	plod3	100	63.462	ENSCANG00000032726	PLOD2	51	60.000	Colobus_angolensis_palliatus
ENSORLG00000029631	plod3	99	65.840	ENSCANG00000000277	PLOD1	50	65.840	Colobus_angolensis_palliatus
ENSORLG00000029631	plod3	100	64.011	ENSCGRG00001022906	Plod2	50	60.519	Cricetulus_griseus_chok1gshd
ENSORLG00000029631	plod3	100	69.780	ENSCGRG00001017088	Plod3	51	69.780	Cricetulus_griseus_chok1gshd
ENSORLG00000029631	plod3	100	64.011	ENSCGRG00000001261	Plod2	50	64.011	Cricetulus_griseus_crigri
ENSORLG00000029631	plod3	100	69.505	ENSCGRG00000009240	Plod3	55	69.505	Cricetulus_griseus_crigri
ENSORLG00000029631	plod3	100	89.286	ENSCVAG00000015237	plod3	57	89.286	Cyprinodon_variegatus
ENSORLG00000029631	plod3	100	85.165	ENSDARG00000076317	plod3	50	85.165	Danio_rerio
ENSORLG00000029631	plod3	100	63.187	ENSDARG00000011821	plod2	51	59.740	Danio_rerio
ENSORLG00000029631	plod3	100	56.218	ENSDNOG00000005149	PLOD2	51	56.218	Dasypus_novemcinctus
ENSORLG00000029631	plod3	99	59.066	ENSDORG00000008737	Plod1	51	58.967	Dipodomys_ordii
ENSORLG00000029631	plod3	100	63.736	ENSDORG00000003217	Plod2	52	63.736	Dipodomys_ordii
ENSORLG00000029631	plod3	100	64.286	ENSEASG00005000164	PLOD2	51	60.779	Equus_asinus_asinus
ENSORLG00000029631	plod3	99	65.289	ENSEASG00005016643	PLOD1	56	65.289	Equus_asinus_asinus
ENSORLG00000029631	plod3	100	64.286	ENSECAG00000009297	PLOD2	51	60.779	Equus_caballus
ENSORLG00000029631	plod3	99	65.651	ENSECAG00000022842	PLOD1	50	65.289	Equus_caballus
ENSORLG00000029631	plod3	99	52.094	ENSEEUG00000015012	PLOD2	50	52.094	Erinaceus_europaeus
ENSORLG00000029631	plod3	100	64.011	ENSFCAG00000023549	PLOD2	50	60.519	Felis_catus
ENSORLG00000029631	plod3	100	60.000	ENSFALG00000007086	PLOD2	50	60.000	Ficedula_albicollis
ENSORLG00000029631	plod3	100	67.308	ENSFALG00000010022	PLOD1	50	67.308	Ficedula_albicollis
ENSORLG00000029631	plod3	100	60.779	ENSFDAG00000011434	PLOD2	58	60.779	Fukomys_damarensis
ENSORLG00000029631	plod3	99	66.116	ENSFDAG00000013861	PLOD1	51	66.116	Fukomys_damarensis
ENSORLG00000029631	plod3	99	62.534	ENSFHEG00000021014	plod1a	55	62.534	Fundulus_heteroclitus
ENSORLG00000029631	plod3	100	63.187	ENSGMOG00000003290	plod1a	52	63.187	Gadus_morhua
ENSORLG00000029631	plod3	100	67.857	ENSGALG00000004531	PLOD1	50	67.857	Gallus_gallus
ENSORLG00000029631	plod3	100	63.736	ENSGALG00000006783	PLOD2	54	60.260	Gallus_gallus
ENSORLG00000029631	plod3	100	90.385	ENSGAFG00000020388	plod3	99	90.385	Gambusia_affinis
ENSORLG00000029631	plod3	99	65.840	ENSGGOG00000013645	PLOD1	50	65.840	Gorilla_gorilla
ENSORLG00000029631	plod3	100	63.736	ENSGGOG00000014284	PLOD2	51	60.260	Gorilla_gorilla
ENSORLG00000029631	plod3	100	59.726	ENSHBUG00000020042	plod1a	53	59.726	Haplochromis_burtoni
ENSORLG00000029631	plod3	100	64.286	ENSHBUG00000015944	plod2	57	64.286	Haplochromis_burtoni
ENSORLG00000029631	plod3	100	64.286	ENSHGLG00000019219	PLOD2	51	60.779	Heterocephalus_glaber_female
ENSORLG00000029631	plod3	100	64.286	ENSHGLG00100003295	PLOD2	51	60.779	Heterocephalus_glaber_male
ENSORLG00000029631	plod3	100	63.462	ENSIPUG00000001033	plod2	50	63.462	Ictalurus_punctatus
ENSORLG00000029631	plod3	100	64.011	ENSSTOG00000025550	PLOD2	50	60.519	Ictidomys_tridecemlineatus
ENSORLG00000029631	plod3	100	63.462	ENSJJAG00000013305	Plod2	50	63.462	Jaculus_jaculus
ENSORLG00000029631	plod3	99	65.289	ENSLBEG00000015540	plod1a	51	65.289	Labrus_bergylta
ENSORLG00000029631	plod3	100	64.011	ENSLAFG00000001931	PLOD2	51	64.011	Loxodonta_africana
ENSORLG00000029631	plod3	99	67.218	ENSLAFG00000000373	PLOD1	50	67.218	Loxodonta_africana
ENSORLG00000029631	plod3	99	65.928	ENSMFAG00000037610	PLOD1	50	65.565	Macaca_fascicularis
ENSORLG00000029631	plod3	100	63.462	ENSMFAG00000038516	PLOD2	54	60.000	Macaca_fascicularis
ENSORLG00000029631	plod3	100	69.780	ENSMFAG00000033241	PLOD3	51	69.780	Macaca_fascicularis
ENSORLG00000029631	plod3	100	60.000	ENSMMUG00000011577	PLOD2	54	60.000	Macaca_mulatta
ENSORLG00000029631	plod3	100	69.780	ENSMNEG00000036923	PLOD3	51	69.780	Macaca_nemestrina
ENSORLG00000029631	plod3	100	63.462	ENSMNEG00000029275	PLOD2	54	60.000	Macaca_nemestrina
ENSORLG00000029631	plod3	100	69.780	ENSMLEG00000036735	PLOD3	50	69.589	Mandrillus_leucophaeus
ENSORLG00000029631	plod3	100	63.187	ENSMLEG00000032487	PLOD2	51	59.740	Mandrillus_leucophaeus
ENSORLG00000029631	plod3	99	55.858	ENSMZEG00005019823	plod2	99	55.858	Maylandia_zebra
ENSORLG00000029631	plod3	100	64.560	ENSMZEG00005017645	plod2	51	61.039	Maylandia_zebra
ENSORLG00000029631	plod3	100	68.407	ENSMGAG00000006085	PLOD1	50	68.407	Meleagris_gallopavo
ENSORLG00000029631	plod3	100	63.736	ENSMAUG00000003215	Plod2	50	60.260	Mesocricetus_auratus
ENSORLG00000029631	plod3	79	70.280	ENSMICG00000005429	-	91	70.280	Microcebus_murinus
ENSORLG00000029631	plod3	99	66.759	ENSMICG00000002720	PLOD1	50	66.391	Microcebus_murinus
ENSORLG00000029631	plod3	100	64.011	ENSMICG00000049252	PLOD2	51	60.519	Microcebus_murinus
ENSORLG00000029631	plod3	100	63.187	ENSMOCG00000014848	Plod2	51	59.740	Microtus_ochrogaster
ENSORLG00000029631	plod3	99	65.289	ENSMMOG00000013171	plod1a	51	65.289	Mola_mola
ENSORLG00000029631	plod3	100	68.464	ENSMODG00000005017	PLOD3	52	68.464	Monodelphis_domestica
ENSORLG00000029631	plod3	99	63.912	ENSMALG00000016161	plod1a	51	63.912	Monopterus_albus
ENSORLG00000029631	plod3	100	64.011	ENSMUSG00000032374	Plod2	51	60.519	Mus_musculus
ENSORLG00000029631	plod3	100	64.011	MGP_PahariEiJ_G0015394	Plod2	51	60.519	Mus_pahari
ENSORLG00000029631	plod3	100	64.286	MGP_SPRETEiJ_G0033668	Plod2	51	60.779	Mus_spretus
ENSORLG00000029631	plod3	100	70.604	ENSMPUG00000015891	PLOD3	53	70.604	Mustela_putorius_furo
ENSORLG00000029631	plod3	100	60.519	ENSMPUG00000011826	PLOD2	51	60.519	Mustela_putorius_furo
ENSORLG00000029631	plod3	90	60.857	ENSMLUG00000023471	-	100	60.857	Myotis_lucifugus
ENSORLG00000029631	plod3	100	70.330	ENSNGAG00000018568	Plod3	50	70.330	Nannospalax_galili
ENSORLG00000029631	plod3	99	66.667	ENSNGAG00000008701	-	99	66.667	Nannospalax_galili
ENSORLG00000029631	plod3	100	64.286	ENSNGAG00000000687	Plod2	52	64.286	Nannospalax_galili
ENSORLG00000029631	plod3	100	64.286	ENSNBRG00000017408	plod2	51	64.286	Neolamprologus_brichardi
ENSORLG00000029631	plod3	100	63.736	ENSNLEG00000005034	PLOD2	51	60.260	Nomascus_leucogenys
ENSORLG00000029631	plod3	99	66.667	ENSMEUG00000008093	PLOD1	51	66.667	Notamacropus_eugenii
ENSORLG00000029631	plod3	100	42.078	ENSOPRG00000006945	PLOD2	50	42.078	Ochotona_princeps
ENSORLG00000029631	plod3	100	65.110	ENSOPRG00000006783	PLOD1	52	65.110	Ochotona_princeps
ENSORLG00000029631	plod3	100	64.560	ENSODEG00000009443	PLOD2	51	61.039	Octodon_degus
ENSORLG00000029631	plod3	100	61.813	ENSONIG00000017978	-	50	61.813	Oreochromis_niloticus
ENSORLG00000029631	plod3	100	60.000	ENSONIG00000005883	plod2	51	60.000	Oreochromis_niloticus
ENSORLG00000029631	plod3	99	68.698	ENSOANG00000004585	-	84	68.698	Ornithorhynchus_anatinus
ENSORLG00000029631	plod3	80	69.863	ENSOCUG00000021812	PLOD3	50	69.863	Oryctolagus_cuniculus
ENSORLG00000029631	plod3	100	60.779	ENSOCUG00000001461	PLOD2	50	60.779	Oryctolagus_cuniculus
ENSORLG00000029631	plod3	100	99.725	ENSORLG00015001924	plod3	99	93.370	Oryzias_latipes_hsok
ENSORLG00000029631	plod3	100	96.429	ENSOMEG00000006893	plod3	50	96.429	Oryzias_melastigma
ENSORLG00000029631	plod3	100	65.110	ENSOMEG00000022732	plod1a	50	65.110	Oryzias_melastigma
ENSORLG00000029631	plod3	100	54.545	ENSOGAG00000009905	PLOD2	52	54.545	Otolemur_garnettii
ENSORLG00000029631	plod3	99	62.568	ENSOGAG00000005351	PLOD1	50	62.568	Otolemur_garnettii
ENSORLG00000029631	plod3	99	66.482	ENSOARG00000017960	PLOD1	51	66.482	Ovis_aries
ENSORLG00000029631	plod3	100	63.736	ENSPPAG00000039540	PLOD2	51	60.260	Pan_paniscus
ENSORLG00000029631	plod3	99	66.116	ENSPPAG00000034724	PLOD1	50	66.116	Pan_paniscus
ENSORLG00000029631	plod3	100	64.011	ENSPPRG00000012277	PLOD2	50	60.519	Panthera_pardus
ENSORLG00000029631	plod3	100	64.011	ENSPTIG00000018891	PLOD2	54	60.519	Panthera_tigris_altaica
ENSORLG00000029631	plod3	99	66.391	ENSPTIG00000020156	PLOD1	50	66.391	Panthera_tigris_altaica
ENSORLG00000029631	plod3	100	63.736	ENSPTRG00000015494	PLOD2	51	60.260	Pan_troglodytes
ENSORLG00000029631	plod3	99	66.116	ENSPTRG00000000158	PLOD1	50	66.116	Pan_troglodytes
ENSORLG00000029631	plod3	100	69.780	ENSPANG00000021830	PLOD3	51	69.780	Papio_anubis
ENSORLG00000029631	plod3	100	63.462	ENSPANG00000020900	PLOD2	54	60.000	Papio_anubis
ENSORLG00000029631	plod3	100	64.011	ENSPKIG00000009566	plod2	53	64.011	Paramormyrops_kingsleyae
ENSORLG00000029631	plod3	100	65.934	ENSPSIG00000011107	PLOD1	50	65.934	Pelodiscus_sinensis
ENSORLG00000029631	plod3	100	59.740	ENSPEMG00000023460	Plod2	53	59.740	Peromyscus_maniculatus_bairdii
ENSORLG00000029631	plod3	100	66.758	ENSPMAG00000003203	-	50	66.758	Petromyzon_marinus
ENSORLG00000029631	plod3	99	62.176	ENSPMAG00000008153	plod2	97	70.124	Petromyzon_marinus
ENSORLG00000029631	plod3	100	65.110	ENSPCIG00000018522	PLOD2	51	61.558	Phascolarctos_cinereus
ENSORLG00000029631	plod3	100	90.659	ENSPLAG00000004494	plod3	50	90.659	Poecilia_latipinna
ENSORLG00000029631	plod3	99	63.361	ENSPLAG00000018953	plod1a	55	63.361	Poecilia_latipinna
ENSORLG00000029631	plod3	100	90.385	ENSPMEG00000001542	plod3	50	90.385	Poecilia_mexicana
ENSORLG00000029631	plod3	100	60.260	ENSPPYG00000029800	-	99	60.260	Pongo_abelii
ENSORLG00000029631	plod3	99	65.840	ENSPPYG00000001874	PLOD1	50	65.840	Pongo_abelii
ENSORLG00000029631	plod3	99	67.313	ENSPCOG00000013522	PLOD1	50	66.942	Propithecus_coquereli
ENSORLG00000029631	plod3	100	69.780	ENSPVAG00000001241	PLOD3	52	69.780	Pteropus_vampyrus
ENSORLG00000029631	plod3	100	60.000	ENSPNYG00000000578	plod1a	50	60.000	Pundamilia_nyererei
ENSORLG00000029631	plod3	100	64.286	ENSPNYG00000006024	plod2	53	64.286	Pundamilia_nyererei
ENSORLG00000029631	plod3	100	83.242	ENSPNAG00000021984	plod3	50	83.242	Pygocentrus_nattereri
ENSORLG00000029631	plod3	100	64.286	ENSRNOG00000030183	Plod2	51	60.779	Rattus_norvegicus
ENSORLG00000029631	plod3	100	63.462	ENSRBIG00000042963	PLOD2	58	60.000	Rhinopithecus_bieti
ENSORLG00000029631	plod3	100	60.000	ENSRROG00000031649	PLOD2	51	60.000	Rhinopithecus_roxellana
ENSORLG00000029631	plod3	100	69.780	ENSSBOG00000020136	PLOD3	50	69.589	Saimiri_boliviensis_boliviensis
ENSORLG00000029631	plod3	100	63.736	ENSSBOG00000030460	PLOD2	58	63.736	Saimiri_boliviensis_boliviensis
ENSORLG00000029631	plod3	100	65.110	ENSSHAG00000017470	PLOD2	52	61.558	Sarcophilus_harrisii
ENSORLG00000029631	plod3	100	64.286	ENSSFOG00015014512	plod2	50	60.779	Scleropages_formosus
ENSORLG00000029631	plod3	100	80.220	ENSSFOG00015022468	plod3	50	80.220	Scleropages_formosus
ENSORLG00000029631	plod3	99	65.840	ENSSFOG00015010374	plod1a	55	65.840	Scleropages_formosus
ENSORLG00000029631	plod3	99	65.840	ENSSMAG00000011129	plod1a	50	65.840	Scophthalmus_maximus
ENSORLG00000029631	plod3	100	87.912	ENSSDUG00000002200	plod3	50	87.912	Seriola_dumerili
ENSORLG00000029631	plod3	89	66.568	ENSSLDG00000007569	plod3	62	71.192	Seriola_lalandi_dorsalis
ENSORLG00000029631	plod3	100	52.468	ENSSARG00000003690	PLOD2	55	52.468	Sorex_araneus
ENSORLG00000029631	plod3	99	66.759	ENSSSCG00000003433	PLOD1	50	66.759	Sus_scrofa
ENSORLG00000029631	plod3	100	64.286	ENSSSCG00000011689	PLOD2	58	60.779	Sus_scrofa
ENSORLG00000029631	plod3	100	63.187	ENSTGUG00000008767	PLOD2	51	63.187	Taeniopygia_guttata
ENSORLG00000029631	plod3	100	67.582	ENSTGUG00000002406	-	50	67.582	Taeniopygia_guttata
ENSORLG00000029631	plod3	99	63.361	ENSTRUG00000008466	plod1	51	63.361	Takifugu_rubripes
ENSORLG00000029631	plod3	100	69.505	ENSTBEG00000014615	PLOD3	71	69.505	Tupaia_belangeri
ENSORLG00000029631	plod3	100	65.659	ENSTTRG00000003503	PLOD1	50	65.659	Tursiops_truncatus
ENSORLG00000029631	plod3	100	64.011	ENSUAMG00000020858	PLOD2	54	64.011	Ursus_americanus
ENSORLG00000029631	plod3	100	69.863	ENSUAMG00000013690	PLOD3	51	69.863	Ursus_americanus
ENSORLG00000029631	plod3	100	60.519	ENSUMAG00000012593	PLOD2	54	60.519	Ursus_maritimus
ENSORLG00000029631	plod3	99	67.218	ENSUMAG00000022265	PLOD1	50	67.218	Ursus_maritimus
ENSORLG00000029631	plod3	100	64.011	ENSVVUG00000008510	PLOD2	51	64.011	Vulpes_vulpes
ENSORLG00000029631	plod3	99	62.810	ENSXCOG00000002023	plod1a	60	62.810	Xiphophorus_couchianus
ENSORLG00000029631	plod3	99	90.251	ENSXMAG00000002047	plod3	98	90.251	Xiphophorus_maculatus