EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029651 (Gene tree)
Gene ID: 101167163
Gene Symbol: si:dkey-33c12.4
Alias: -
Full Name: uncharacterized LOC101167163
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 20315 bases
Position: chr22:25549181-25569495
Accession: 101167163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036580	RRM_1	PF00076.22	4.2e-08	1	1
ENSORLP00000043657	RRM_1	PF00076.22	4.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029964	-	4917	XM_023951797	ENSORLP00000043657	646 (aa)	XP_023807565	UPI000CE21B5F
ENSORLT00000032720	-	4791	-	ENSORLP00000036580	604 (aa)	-	-

Gene Model

Click here to download ENSORLG00000029651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029651	si:dkey-33c12.4	74	33.474	ENSORLG00000030385	-	50	38.511

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029651	si:dkey-33c12.4	60	30.130	ENSAPOG00000019633	zgc:123010	55	30.503	Acanthochromis_polyacanthus
ENSORLG00000029651	si:dkey-33c12.4	51	41.194	ENSAPOG00000022403	-	51	40.719	Acanthochromis_polyacanthus
ENSORLG00000029651	si:dkey-33c12.4	99	52.648	ENSAPOG00000005058	si:dkey-33c12.4	98	53.149	Acanthochromis_polyacanthus
ENSORLG00000029651	si:dkey-33c12.4	60	30.130	ENSAOCG00000005910	zgc:123010	63	30.208	Amphiprion_ocellaris
ENSORLG00000029651	si:dkey-33c12.4	51	41.617	ENSAOCG00000000431	-	51	40.419	Amphiprion_ocellaris
ENSORLG00000029651	si:dkey-33c12.4	97	54.391	ENSAOCG00000020066	si:dkey-33c12.4	96	54.531	Amphiprion_ocellaris
ENSORLG00000029651	si:dkey-33c12.4	51	41.003	ENSAPEG00000023603	-	51	40.118	Amphiprion_percula
ENSORLG00000029651	si:dkey-33c12.4	98	51.097	ENSATEG00000018885	si:dkey-33c12.4	99	51.496	Anabas_testudineus
ENSORLG00000029651	si:dkey-33c12.4	55	39.227	ENSATEG00000018302	-	57	40.000	Anabas_testudineus
ENSORLG00000029651	si:dkey-33c12.4	55	30.579	ENSATEG00000022160	-	58	39.456	Anabas_testudineus
ENSORLG00000029651	si:dkey-33c12.4	60	30.491	ENSATEG00000001220	zgc:123010	63	30.208	Anabas_testudineus
ENSORLG00000029651	si:dkey-33c12.4	96	52.174	ENSACLG00000014192	si:dkey-33c12.4	99	51.501	Astatotilapia_calliptera
ENSORLG00000029651	si:dkey-33c12.4	59	30.423	ENSAMXG00000041967	zgc:123010	62	31.135	Astyanax_mexicanus
ENSORLG00000029651	si:dkey-33c12.4	97	34.769	ENSAMXG00000010871	si:dkey-33c12.4	56	42.049	Astyanax_mexicanus
ENSORLG00000029651	si:dkey-33c12.4	58	38.441	ENSCPBG00000024454	-	65	35.076	Chrysemys_picta_bellii
ENSORLG00000029651	si:dkey-33c12.4	56	40.884	ENSCVAG00000004187	-	58	38.873	Cyprinodon_variegatus
ENSORLG00000029651	si:dkey-33c12.4	60	31.429	ENSCVAG00000013288	zgc:123010	63	30.729	Cyprinodon_variegatus
ENSORLG00000029651	si:dkey-33c12.4	99	50.932	ENSCVAG00000006564	-	98	49.525	Cyprinodon_variegatus
ENSORLG00000029651	si:dkey-33c12.4	62	39.642	ENSDARG00000057890	si:dkey-33c12.4	53	41.714	Danio_rerio
ENSORLG00000029651	si:dkey-33c12.4	59	30.263	ENSDARG00000039082	zgc:123010	64	37.989	Danio_rerio
ENSORLG00000029651	si:dkey-33c12.4	95	35.093	ENSELUG00000002009	si:dkey-33c12.4	97	45.983	Esox_lucius
ENSORLG00000029651	si:dkey-33c12.4	80	35.260	ENSELUG00000001633	-	59	40.263	Esox_lucius
ENSORLG00000029651	si:dkey-33c12.4	58	31.635	ENSELUG00000022008	zgc:123010	74	41.875	Esox_lucius
ENSORLG00000029651	si:dkey-33c12.4	55	30.508	ENSELUG00000021447	-	62	37.500	Esox_lucius
ENSORLG00000029651	si:dkey-33c12.4	99	52.462	ENSFHEG00000005521	si:dkey-33c12.4	98	51.950	Fundulus_heteroclitus
ENSORLG00000029651	si:dkey-33c12.4	60	30.909	ENSFHEG00000002306	zgc:123010	63	30.990	Fundulus_heteroclitus
ENSORLG00000029651	si:dkey-33c12.4	51	41.003	ENSGAFG00000016594	-	51	40.060	Gambusia_affinis
ENSORLG00000029651	si:dkey-33c12.4	99	50.230	ENSGAFG00000017596	si:dkey-33c12.4	99	51.863	Gambusia_affinis
ENSORLG00000029651	si:dkey-33c12.4	60	30.649	ENSGAFG00000009373	zgc:123010	54	40.625	Gambusia_affinis
ENSORLG00000029651	si:dkey-33c12.4	59	57.300	ENSGACG00000004936	-	98	56.986	Gasterosteus_aculeatus
ENSORLG00000029651	si:dkey-33c12.4	96	52.019	ENSHBUG00000010735	si:dkey-33c12.4	97	52.411	Haplochromis_burtoni
ENSORLG00000029651	si:dkey-33c12.4	96	34.688	ENSIPUG00000005998	si:dkey-33c12.4	54	45.198	Ictalurus_punctatus
ENSORLG00000029651	si:dkey-33c12.4	71	30.252	ENSKMAG00000006468	-	71	31.992	Kryptolebias_marmoratus
ENSORLG00000029651	si:dkey-33c12.4	99	52.786	ENSKMAG00000016610	si:dkey-33c12.4	98	53.616	Kryptolebias_marmoratus
ENSORLG00000029651	si:dkey-33c12.4	64	34.895	ENSLBEG00000028046	-	58	36.267	Labrus_bergylta
ENSORLG00000029651	si:dkey-33c12.4	98	49.689	ENSLBEG00000021088	-	99	50.155	Labrus_bergylta
ENSORLG00000029651	si:dkey-33c12.4	91	48.007	ENSLBEG00000017203	-	99	49.169	Labrus_bergylta
ENSORLG00000029651	si:dkey-33c12.4	53	37.209	ENSLACG00000004602	-	58	37.209	Latimeria_chalumnae
ENSORLG00000029651	si:dkey-33c12.4	87	35.159	ENSLOCG00000001861	-	72	35.805	Lepisosteus_oculatus
ENSORLG00000029651	si:dkey-33c12.4	98	49.235	ENSMAMG00000000111	si:dkey-33c12.4	99	50.543	Mastacembelus_armatus
ENSORLG00000029651	si:dkey-33c12.4	53	30.814	ENSMAMG00000002377	-	66	41.912	Mastacembelus_armatus
ENSORLG00000029651	si:dkey-33c12.4	52	33.016	ENSMAMG00000002460	-	69	42.647	Mastacembelus_armatus
ENSORLG00000029651	si:dkey-33c12.4	54	30.321	ENSMAMG00000003394	-	80	30.321	Mastacembelus_armatus
ENSORLG00000029651	si:dkey-33c12.4	54	31.897	ENSMAMG00000001145	zgc:123010	72	32.184	Mastacembelus_armatus
ENSORLG00000029651	si:dkey-33c12.4	96	51.783	ENSMZEG00005014276	si:dkey-33c12.4	97	52.019	Maylandia_zebra
ENSORLG00000029651	si:dkey-33c12.4	56	37.912	ENSMZEG00005000585	-	53	41.176	Maylandia_zebra
ENSORLG00000029651	si:dkey-33c12.4	53	30.233	ENSMMOG00000010544	zgc:123010	62	45.000	Mola_mola
ENSORLG00000029651	si:dkey-33c12.4	54	39.205	ENSMALG00000003167	-	51	39.645	Monopterus_albus
ENSORLG00000029651	si:dkey-33c12.4	60	31.688	ENSMALG00000017698	zgc:123010	63	30.990	Monopterus_albus
ENSORLG00000029651	si:dkey-33c12.4	98	50.000	ENSMALG00000002265	si:dkey-33c12.4	99	50.462	Monopterus_albus
ENSORLG00000029651	si:dkey-33c12.4	63	34.444	ENSNBRG00000021157	zgc:123010	70	41.401	Neolamprologus_brichardi
ENSORLG00000029651	si:dkey-33c12.4	51	39.610	ENSONIG00000007538	-	97	39.286	Oreochromis_niloticus
ENSORLG00000029651	si:dkey-33c12.4	57	61.190	ENSONIG00000012263	-	92	77.500	Oreochromis_niloticus
ENSORLG00000029651	si:dkey-33c12.4	52	30.321	ENSONIG00000000297	-	91	41.538	Oreochromis_niloticus
ENSORLG00000029651	si:dkey-33c12.4	53	30.721	ENSORLG00020003457	zgc:123010	55	30.189	Oryzias_latipes_hni
ENSORLG00000029651	si:dkey-33c12.4	100	97.833	ENSORLG00020008750	si:dkey-33c12.4	100	97.833	Oryzias_latipes_hni
ENSORLG00000029651	si:dkey-33c12.4	55	39.276	ENSOMEG00000009428	-	70	35.635	Oryzias_melastigma
ENSORLG00000029651	si:dkey-33c12.4	99	81.288	ENSOMEG00000008913	-	99	80.989	Oryzias_melastigma
ENSORLG00000029651	si:dkey-33c12.4	59	31.283	ENSPKIG00000015521	zgc:123010	96	32.110	Paramormyrops_kingsleyae
ENSORLG00000029651	si:dkey-33c12.4	93	35.784	ENSPKIG00000011819	-	71	35.630	Paramormyrops_kingsleyae
ENSORLG00000029651	si:dkey-33c12.4	52	30.240	ENSPMAG00000004544	zgc:123010	86	43.636	Petromyzon_marinus
ENSORLG00000029651	si:dkey-33c12.4	50	43.125	ENSPFOG00000017092	-	83	38.366	Poecilia_formosa
ENSORLG00000029651	si:dkey-33c12.4	99	50.531	ENSPFOG00000009143	si:dkey-33c12.4	99	51.529	Poecilia_formosa
ENSORLG00000029651	si:dkey-33c12.4	96	50.629	ENSPLAG00000022537	si:dkey-33c12.4	99	51.030	Poecilia_latipinna
ENSORLG00000029651	si:dkey-33c12.4	51	41.692	ENSPMEG00000009905	-	64	38.614	Poecilia_mexicana
ENSORLG00000029651	si:dkey-33c12.4	99	48.649	ENSPMEG00000015590	si:dkey-33c12.4	99	51.376	Poecilia_mexicana
ENSORLG00000029651	si:dkey-33c12.4	51	41.692	ENSPREG00000016861	-	71	38.041	Poecilia_reticulata
ENSORLG00000029651	si:dkey-33c12.4	96	51.938	ENSPNYG00000018262	si:dkey-33c12.4	97	52.174	Pundamilia_nyererei
ENSORLG00000029651	si:dkey-33c12.4	63	42.051	ENSPNAG00000018386	si:dkey-33c12.4	98	34.851	Pygocentrus_nattereri
ENSORLG00000029651	si:dkey-33c12.4	50	39.181	ENSSFOG00015021394	zgc:123010	64	39.181	Scleropages_formosus
ENSORLG00000029651	si:dkey-33c12.4	58	41.096	ENSSFOG00015005186	-	58	41.463	Scleropages_formosus
ENSORLG00000029651	si:dkey-33c12.4	57	43.324	ENSSFOG00015009199	-	57	43.324	Scleropages_formosus
ENSORLG00000029651	si:dkey-33c12.4	60	30.130	ENSSMAG00000002904	zgc:123010	79	30.476	Scophthalmus_maximus
ENSORLG00000029651	si:dkey-33c12.4	51	39.881	ENSSMAG00000010960	-	53	39.640	Scophthalmus_maximus
ENSORLG00000029651	si:dkey-33c12.4	97	48.120	ENSSMAG00000008147	si:dkey-33c12.4	98	48.946	Scophthalmus_maximus
ENSORLG00000029651	si:dkey-33c12.4	98	50.765	ENSSDUG00000003213	si:dkey-33c12.4	99	50.460	Seriola_dumerili
ENSORLG00000029651	si:dkey-33c12.4	60	30.909	ENSSDUG00000008651	zgc:123010	63	30.208	Seriola_dumerili
ENSORLG00000029651	si:dkey-33c12.4	55	41.143	ENSSDUG00000010976	-	53	41.994	Seriola_dumerili
ENSORLG00000029651	si:dkey-33c12.4	55	41.193	ENSSLDG00000012846	-	55	41.994	Seriola_lalandi_dorsalis
ENSORLG00000029651	si:dkey-33c12.4	60	30.909	ENSSLDG00000019386	zgc:123010	65	30.208	Seriola_lalandi_dorsalis
ENSORLG00000029651	si:dkey-33c12.4	98	51.520	ENSSLDG00000009448	si:dkey-33c12.4	99	51.534	Seriola_lalandi_dorsalis
ENSORLG00000029651	si:dkey-33c12.4	99	51.560	ENSSPAG00000022577	-	98	51.729	Stegastes_partitus
ENSORLG00000029651	si:dkey-33c12.4	60	31.510	ENSSPAG00000013621	zgc:123010	63	30.990	Stegastes_partitus
ENSORLG00000029651	si:dkey-33c12.4	59	60.055	ENSTRUG00000022374	si:dkey-33c12.4	90	47.386	Takifugu_rubripes
ENSORLG00000029651	si:dkey-33c12.4	60	30.412	ENSTRUG00000024824	zgc:123010	64	30.208	Takifugu_rubripes
ENSORLG00000029651	si:dkey-33c12.4	55	56.024	ENSTNIG00000010542	-	94	66.071	Tetraodon_nigroviridis
ENSORLG00000029651	si:dkey-33c12.4	54	31.412	ENSTNIG00000001303	zgc:123010	90	30.259	Tetraodon_nigroviridis
ENSORLG00000029651	si:dkey-33c12.4	54	32.571	ENSXCOG00000012281	zgc:123010	72	30.878	Xiphophorus_couchianus
ENSORLG00000029651	si:dkey-33c12.4	60	30.649	ENSXMAG00000002598	zgc:123010	55	30.503	Xiphophorus_maculatus
ENSORLG00000029651	si:dkey-33c12.4	99	51.459	ENSXMAG00000018535	si:dkey-33c12.4	99	52.722	Xiphophorus_maculatus