EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029675 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111947296
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6491 bases
Position: chr1:17720882-17727372
Accession: 111947296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000038254	RVT_1	PF00078.27	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000031051	-	6491	XM_023953834	ENSORLP00000038254	1573 (aa)	XP_023809602	-

Gene Model

Click here to download ENSORLG00000029675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029675	-	56	37.969	ENSORLG00000026212	-	55	37.969
ENSORLG00000029675	-	87	35.307	ENSORLG00000024220	-	88	35.307
ENSORLG00000029675	-	51	36.226	ENSORLG00000027415	-	74	36.226
ENSORLG00000029675	-	51	31.611	ENSORLG00000028175	-	57	31.611
ENSORLG00000029675	-	51	37.174	ENSORLG00000024962	-	56	37.174
ENSORLG00000029675	-	53	30.545	ENSORLG00000027440	-	56	30.545
ENSORLG00000029675	-	100	99.048	ENSORLG00000029874	-	100	99.048
ENSORLG00000029675	-	87	34.093	ENSORLG00000028609	-	89	34.093
ENSORLG00000029675	-	99	53.304	ENSORLG00000026873	-	99	53.178
ENSORLG00000029675	-	53	30.661	ENSORLG00000022989	-	55	30.661
ENSORLG00000029675	-	54	36.900	ENSORLG00000023550	-	70	36.797
ENSORLG00000029675	-	68	55.064	ENSORLG00000028632	-	99	55.064
ENSORLG00000029675	-	88	34.543	ENSORLG00000024904	-	91	34.543
ENSORLG00000029675	-	60	59.220	ENSORLG00000026676	-	98	59.220
ENSORLG00000029675	-	88	32.143	ENSORLG00000027831	-	95	31.824
ENSORLG00000029675	-	51	37.527	ENSORLG00000029674	-	57	37.527
ENSORLG00000029675	-	87	35.374	ENSORLG00000030265	-	88	35.374
ENSORLG00000029675	-	87	34.498	ENSORLG00000028795	-	89	34.498
ENSORLG00000029675	-	87	34.093	ENSORLG00000030542	-	89	34.093
ENSORLG00000029675	-	51	33.474	ENSORLG00000025132	-	65	33.474
ENSORLG00000029675	-	52	34.316	ENSORLG00000024900	-	57	34.316
ENSORLG00000029675	-	99	53.304	ENSORLG00000023181	-	99	53.178
ENSORLG00000029675	-	54	35.897	ENSORLG00000027277	-	63	35.897
ENSORLG00000029675	-	53	36.789	ENSORLG00000022054	-	62	36.789
ENSORLG00000029675	-	52	31.942	ENSORLG00000028266	-	60	32.189
ENSORLG00000029675	-	51	36.226	ENSORLG00000026705	-	56	36.226
ENSORLG00000029675	-	51	36.789	ENSORLG00000024198	-	78	36.789
ENSORLG00000029675	-	80	33.847	ENSORLG00000022369	-	86	33.847
ENSORLG00000029675	-	52	32.460	ENSORLG00000029435	-	60	32.258
ENSORLG00000029675	-	87	35.302	ENSORLG00000027568	-	88	35.302
ENSORLG00000029675	-	52	34.105	ENSORLG00000029329	-	56	34.105
ENSORLG00000029675	-	52	33.333	ENSORLG00000027117	-	63	33.333
ENSORLG00000029675	-	92	33.333	ENSORLG00000026546	-	88	34.346
ENSORLG00000029675	-	51	37.174	ENSORLG00000025916	-	56	37.174
ENSORLG00000029675	-	50	30.350	ENSORLG00000029163	-	53	30.350
ENSORLG00000029675	-	51	37.310	ENSORLG00000027979	-	60	37.310
ENSORLG00000029675	-	51	31.760	ENSORLG00000028879	-	86	31.760
ENSORLG00000029675	-	50	37.931	ENSORLG00000022683	-	77	37.931
ENSORLG00000029675	-	87	35.374	ENSORLG00000025739	-	88	35.374
ENSORLG00000029675	-	53	30.661	ENSORLG00000024795	-	55	30.661
ENSORLG00000029675	-	92	33.643	ENSORLG00000026665	-	88	34.678
ENSORLG00000029675	-	92	33.400	ENSORLG00000024233	-	88	34.417
ENSORLG00000029675	-	51	37.527	ENSORLG00000022515	-	56	37.527
ENSORLG00000029675	-	99	53.241	ENSORLG00000026629	-	99	53.115
ENSORLG00000029675	-	51	37.156	ENSORLG00000027523	-	87	37.156
ENSORLG00000029675	-	52	32.029	ENSORLG00000026148	-	65	32.029
ENSORLG00000029675	-	52	37.292	ENSORLG00000026067	-	58	37.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029675	-	59	41.113	ENSAPOG00000008045	-	95	40.938	Acanthochromis_polyacanthus
ENSORLG00000029675	-	74	36.895	ENSAPOG00000012135	-	98	36.895	Acanthochromis_polyacanthus
ENSORLG00000029675	-	50	30.456	ENSAPOG00000013711	-	94	30.456	Acanthochromis_polyacanthus
ENSORLG00000029675	-	66	33.490	ENSACLG00000001563	-	99	33.490	Astatotilapia_calliptera
ENSORLG00000029675	-	56	37.315	ENSACLG00000027730	-	75	37.315	Astatotilapia_calliptera
ENSORLG00000029675	-	87	35.664	ENSACLG00000009628	-	88	35.664	Astatotilapia_calliptera
ENSORLG00000029675	-	60	58.603	ENSACLG00000018181	-	99	58.603	Astatotilapia_calliptera
ENSORLG00000029675	-	99	52.334	ENSACLG00000000499	-	99	52.114	Astatotilapia_calliptera
ENSORLG00000029675	-	51	40.196	ENSACLG00000007343	-	97	40.319	Astatotilapia_calliptera
ENSORLG00000029675	-	99	54.829	ENSACLG00000027291	-	99	54.467	Astatotilapia_calliptera
ENSORLG00000029675	-	86	32.274	ENSACLG00000019876	-	89	32.274	Astatotilapia_calliptera
ENSORLG00000029675	-	87	34.255	ENSACLG00000017161	-	88	34.255	Astatotilapia_calliptera
ENSORLG00000029675	-	97	59.520	ENSACLG00000018060	-	99	59.520	Astatotilapia_calliptera
ENSORLG00000029675	-	99	53.247	ENSACLG00000013572	-	99	52.999	Astatotilapia_calliptera
ENSORLG00000029675	-	99	52.520	ENSACLG00000014870	-	99	52.301	Astatotilapia_calliptera
ENSORLG00000029675	-	86	32.274	ENSACLG00000014619	-	90	32.274	Astatotilapia_calliptera
ENSORLG00000029675	-	87	35.734	ENSACLG00000025719	-	88	35.734	Astatotilapia_calliptera
ENSORLG00000029675	-	99	43.270	ENSACLG00000002180	-	95	45.604	Astatotilapia_calliptera
ENSORLG00000029675	-	92	32.434	ENSACLG00000026879	-	93	32.817	Astatotilapia_calliptera
ENSORLG00000029675	-	87	35.594	ENSACLG00000024091	-	88	35.594	Astatotilapia_calliptera
ENSORLG00000029675	-	99	52.520	ENSACLG00000017808	-	99	52.301	Astatotilapia_calliptera
ENSORLG00000029675	-	99	53.354	ENSAMXG00000031698	-	99	53.263	Astyanax_mexicanus
ENSORLG00000029675	-	86	56.360	ENSAMXG00000038578	-	99	56.287	Astyanax_mexicanus
ENSORLG00000029675	-	70	49.355	ENSAMXG00000041112	-	99	48.881	Astyanax_mexicanus
ENSORLG00000029675	-	92	50.601	ENSAMXG00000030902	-	100	50.467	Astyanax_mexicanus
ENSORLG00000029675	-	94	54.647	ENSAMXG00000040892	-	99	52.842	Astyanax_mexicanus
ENSORLG00000029675	-	63	36.795	ENSAMXG00000038169	-	77	37.290	Astyanax_mexicanus
ENSORLG00000029675	-	55	36.902	ENSAMXG00000030987	-	58	37.500	Astyanax_mexicanus
ENSORLG00000029675	-	53	38.599	ENSCPBG00000011626	-	98	38.599	Chrysemys_picta_bellii
ENSORLG00000029675	-	51	56.495	ENSCVAG00000009912	-	99	56.495	Cyprinodon_variegatus
ENSORLG00000029675	-	71	56.239	ENSELUG00000000948	-	99	55.435	Esox_lucius
ENSORLG00000029675	-	65	30.447	ENSFHEG00000000971	-	86	30.447	Fundulus_heteroclitus
ENSORLG00000029675	-	53	39.068	ENSGAGG00000012039	-	99	39.068	Gopherus_agassizii
ENSORLG00000029675	-	70	32.247	ENSGAGG00000025282	-	99	32.247	Gopherus_agassizii
ENSORLG00000029675	-	60	39.222	ENSGAGG00000014450	-	83	39.222	Gopherus_agassizii
ENSORLG00000029675	-	53	39.068	ENSGAGG00000020521	-	99	39.068	Gopherus_agassizii
ENSORLG00000029675	-	92	31.290	ENSGAGG00000022240	-	94	31.728	Gopherus_agassizii
ENSORLG00000029675	-	55	36.969	ENSIPUG00000000601	-	93	36.969	Ictalurus_punctatus
ENSORLG00000029675	-	68	55.055	ENSMAMG00000018393	-	100	55.055	Mastacembelus_armatus
ENSORLG00000029675	-	54	44.820	ENSMAMG00000012310	-	99	44.719	Mastacembelus_armatus
ENSORLG00000029675	-	67	57.767	ENSMZEG00005000633	-	99	57.767	Maylandia_zebra
ENSORLG00000029675	-	88	34.473	ENSORLG00020014203	-	89	34.473	Oryzias_latipes_hni
ENSORLG00000029675	-	87	34.298	ENSORLG00020020268	-	90	34.298	Oryzias_latipes_hni
ENSORLG00000029675	-	88	34.473	ENSORLG00020003869	-	89	34.473	Oryzias_latipes_hni
ENSORLG00000029675	-	87	34.426	ENSORLG00020001422	-	89	34.426	Oryzias_latipes_hni
ENSORLG00000029675	-	87	35.302	ENSORLG00020008293	-	88	35.302	Oryzias_latipes_hni
ENSORLG00000029675	-	87	34.426	ENSORLG00015018878	-	89	34.426	Oryzias_latipes_hsok
ENSORLG00000029675	-	87	34.426	ENSORLG00015017778	-	89	34.426	Oryzias_latipes_hsok
ENSORLG00000029675	-	97	61.871	ENSOMEG00000009987	-	99	61.353	Oryzias_melastigma
ENSORLG00000029675	-	87	34.128	ENSOMEG00000003712	-	90	34.128	Oryzias_melastigma
ENSORLG00000029675	-	84	32.708	ENSPSIG00000000767	-	94	32.708	Pelodiscus_sinensis
ENSORLG00000029675	-	70	35.215	ENSPSIG00000000353	-	90	35.121	Pelodiscus_sinensis
ENSORLG00000029675	-	87	32.542	ENSPSIG00000000489	-	92	32.867	Pelodiscus_sinensis
ENSORLG00000029675	-	53	39.505	ENSPSIG00000001658	-	94	39.505	Pelodiscus_sinensis
ENSORLG00000029675	-	85	33.357	ENSPSIG00000000994	-	93	33.789	Pelodiscus_sinensis
ENSORLG00000029675	-	77	33.202	ENSPMEG00000016355	-	99	33.202	Poecilia_mexicana
ENSORLG00000029675	-	51	40.864	ENSPMEG00000019585	-	99	40.864	Poecilia_mexicana
ENSORLG00000029675	-	99	49.568	ENSPREG00000000390	-	99	49.199	Poecilia_reticulata
ENSORLG00000029675	-	99	48.817	ENSPREG00000004954	-	99	48.791	Poecilia_reticulata
ENSORLG00000029675	-	74	35.524	ENSSDUG00000002460	-	91	35.661	Seriola_dumerili
ENSORLG00000029675	-	52	30.012	ENSSLDG00000004385	-	84	30.129	Seriola_lalandi_dorsalis
ENSORLG00000029675	-	99	52.872	ENSXMAG00000023319	-	99	52.872	Xiphophorus_maculatus
ENSORLG00000029675	-	68	49.813	ENSXMAG00000030089	-	99	49.813	Xiphophorus_maculatus
ENSORLG00000029675	-	99	44.549	ENSXMAG00000026594	-	99	44.153	Xiphophorus_maculatus
ENSORLG00000029675	-	81	34.301	ENSXMAG00000030100	-	90	34.530	Xiphophorus_maculatus
ENSORLG00000029675	-	87	34.241	ENSXMAG00000026031	-	89	34.456	Xiphophorus_maculatus
ENSORLG00000029675	-	99	43.519	ENSXMAG00000023503	-	99	43.018	Xiphophorus_maculatus
ENSORLG00000029675	-	99	44.486	ENSXMAG00000021213	-	99	44.090	Xiphophorus_maculatus
ENSORLG00000029675	-	99	43.519	ENSXMAG00000023079	-	99	43.018	Xiphophorus_maculatus
ENSORLG00000029675	-	99	52.687	ENSXMAG00000021298	-	99	52.687	Xiphophorus_maculatus