EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000029824 (Gene tree)
Gene ID: 100049528
Gene Symbol: srsf2a
Alias: -
Full Name: serine/arginine-rich splicing factor 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 2712 bases
Position: chr19:13461379-13464090
Accession: 100049528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000026065	RRM_1	PF00076.22	3.8e-20	1	1
ENSORLP00000043443	RRM_1	PF00076.22	3.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000032234	-	1253	XM_011492450	ENSORLP00000043443	239 (aa)	XP_011490752	UPI0002A479BC
ENSORLT00000027165	-	1583	XM_011492452	ENSORLP00000026065	239 (aa)	XP_011490754	UPI0002A479BC

Gene Model

Click here to download ENSORLG00000029824's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG
ola05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029824	srsf2a	87	64.904	ENSCHOG00000014019	-	52	90.654	Choloepus_hoffmanni
ENSORLG00000029824	srsf2a	51	92.562	ENSDARG00000057484	srsf2a	91	94.393	Danio_rerio
ENSORLG00000029824	srsf2a	77	51.630	ENSDNOG00000033905	-	52	62.245	Dasypus_novemcinctus
ENSORLG00000029824	srsf2a	52	54.400	ENSMLUG00000026613	-	52	57.944	Myotis_lucifugus
ENSORLG00000029824	srsf2a	99	51.695	ENSSSCG00000012212	-	52	72.549	Sus_scrofa