EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000029854 (Gene tree)
Gene ID: 105357348
Gene Symbol: srsf5b
Alias: -
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4665 bases
Position: chr24:291431-296095
Accession: 105357348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000034232	RRM_1	PF00076.22	6.8e-32	1	2
ENSORLP00000034232	RRM_1	PF00076.22	6.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000039448	-	951	XM_023953100	ENSORLP00000034232	316 (aa)	XP_023808868	-

Gene Model

Click here to download ENSORLG00000029854's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG
ola05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000029854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000029854	srsf5b	72	60.177	ENSORLG00000009268	srsf5a	68	69.892
ENSORLG00000029854	srsf5b	55	41.011	ENSORLG00000023709	srsf9	68	41.011
ENSORLG00000029854	srsf5b	53	47.368	ENSORLG00000005314	-	64	50.000
ENSORLG00000029854	srsf5b	53	46.784	ENSORLG00000004580	srsf1a	64	47.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000029854	srsf5b	58	79.787	ENSG00000100650	SRSF5	98	73.282	Homo_sapiens
ENSORLG00000029854	srsf5b	100	80.374	ENSAPOG00000008642	srsf5b	100	81.620	Acanthochromis_polyacanthus
ENSORLG00000029854	srsf5b	58	79.787	ENSAMEG00000014574	SRSF5	67	78.534	Ailuropoda_melanoleuca
ENSORLG00000029854	srsf5b	100	80.062	ENSACIG00000010742	srsf5b	100	81.308	Amphilophus_citrinellus
ENSORLG00000029854	srsf5b	100	80.062	ENSAOCG00000005719	srsf5b	100	81.308	Amphiprion_ocellaris
ENSORLG00000029854	srsf5b	100	80.062	ENSAPEG00000007830	srsf5b	100	81.308	Amphiprion_percula
ENSORLG00000029854	srsf5b	92	78.114	ENSATEG00000019112	srsf5b	100	79.128	Anabas_testudineus
ENSORLG00000029854	srsf5b	56	81.250	ENSAPLG00000014681	SRSF5	69	76.562	Anas_platyrhynchos
ENSORLG00000029854	srsf5b	58	81.283	ENSACAG00000005143	SRSF5	69	79.581	Anolis_carolinensis
ENSORLG00000029854	srsf5b	58	80.214	ENSANAG00000027977	-	79	88.462	Aotus_nancymaae
ENSORLG00000029854	srsf5b	100	80.062	ENSACLG00000026424	srsf5b	100	81.308	Astatotilapia_calliptera
ENSORLG00000029854	srsf5b	59	88.482	ENSAMXG00000011932	srsf5b	84	86.154	Astyanax_mexicanus
ENSORLG00000029854	srsf5b	58	79.787	ENSBTAG00000011596	SRSF5	67	78.534	Bos_taurus
ENSORLG00000029854	srsf5b	58	79.787	ENSCJAG00000014884	SRSF5	79	88.462	Callithrix_jacchus
ENSORLG00000029854	srsf5b	58	79.787	ENSCAFG00000016589	SRSF5	67	78.534	Canis_familiaris
ENSORLG00000029854	srsf5b	58	79.787	ENSCAFG00020005661	SRSF5	67	78.534	Canis_lupus_dingo
ENSORLG00000029854	srsf5b	58	80.214	ENSCHIG00000016794	SRSF5	66	78.534	Capra_hircus
ENSORLG00000029854	srsf5b	58	80.214	ENSTSYG00000007786	SRSF5	79	88.462	Carlito_syrichta
ENSORLG00000029854	srsf5b	58	80.214	ENSCAPG00000008801	SRSF5	66	78.534	Cavia_aperea
ENSORLG00000029854	srsf5b	58	80.214	ENSCPOG00000039926	SRSF5	66	78.534	Cavia_porcellus
ENSORLG00000029854	srsf5b	58	80.214	ENSCCAG00000029002	SRSF5	79	88.462	Cebus_capucinus
ENSORLG00000029854	srsf5b	58	80.214	ENSCATG00000045051	SRSF5	79	88.462	Cercocebus_atys
ENSORLG00000029854	srsf5b	58	79.787	ENSCLAG00000004755	SRSF5	67	78.534	Chinchilla_lanigera
ENSORLG00000029854	srsf5b	58	79.787	ENSCSAG00000013041	SRSF5	67	78.534	Chlorocebus_sabaeus
ENSORLG00000029854	srsf5b	58	80.749	ENSCPBG00000021653	SRSF5	68	79.058	Chrysemys_picta_bellii
ENSORLG00000029854	srsf5b	58	80.214	ENSCANG00000030560	SRSF5	79	88.462	Colobus_angolensis_palliatus
ENSORLG00000029854	srsf5b	58	79.787	ENSCGRG00001015339	Srsf5	68	78.534	Cricetulus_griseus_chok1gshd
ENSORLG00000029854	srsf5b	58	79.787	ENSCGRG00000009833	Srsf5	68	78.534	Cricetulus_griseus_crigri
ENSORLG00000029854	srsf5b	86	76.449	ENSCSEG00000003801	srsf5b	100	77.259	Cynoglossus_semilaevis
ENSORLG00000029854	srsf5b	93	75.920	ENSCVAG00000017240	srsf5b	88	77.228	Cyprinodon_variegatus
ENSORLG00000029854	srsf5b	58	88.770	ENSDARG00000027734	srsf5b	90	85.385	Danio_rerio
ENSORLG00000029854	srsf5b	58	80.214	ENSDNOG00000006160	SRSF5	68	78.534	Dasypus_novemcinctus
ENSORLG00000029854	srsf5b	58	79.787	ENSDORG00000003989	Srsf5	68	78.534	Dipodomys_ordii
ENSORLG00000029854	srsf5b	68	57.466	ENSEBUG00000006229	srsf5b	69	64.362	Eptatretus_burgeri
ENSORLG00000029854	srsf5b	58	79.787	ENSEASG00005016615	SRSF5	67	78.534	Equus_asinus_asinus
ENSORLG00000029854	srsf5b	58	79.787	ENSECAG00000026873	SRSF5	88	73.282	Equus_caballus
ENSORLG00000029854	srsf5b	92	71.246	ENSELUG00000019852	srsf5b	85	81.250	Esox_lucius
ENSORLG00000029854	srsf5b	58	79.787	ENSFCAG00000008848	SRSF5	78	88.462	Felis_catus
ENSORLG00000029854	srsf5b	58	78.571	ENSFALG00000004979	SRSF5	68	78.495	Ficedula_albicollis
ENSORLG00000029854	srsf5b	58	79.787	ENSFDAG00000011562	SRSF5	68	78.534	Fukomys_damarensis
ENSORLG00000029854	srsf5b	93	78.405	ENSFHEG00000009476	srsf5b	88	76.768	Fundulus_heteroclitus
ENSORLG00000029854	srsf5b	59	76.106	ENSGMOG00000000595	srsf5b	99	75.664	Gadus_morhua
ENSORLG00000029854	srsf5b	58	78.022	ENSGALG00000009421	SRSF5	88	71.429	Gallus_gallus
ENSORLG00000029854	srsf5b	92	79.461	ENSGAFG00000002865	srsf5b	89	78.451	Gambusia_affinis
ENSORLG00000029854	srsf5b	58	66.260	ENSGACG00000007834	srsf5b	86	83.088	Gasterosteus_aculeatus
ENSORLG00000029854	srsf5b	58	80.749	ENSGAGG00000004447	SRSF5	68	79.058	Gopherus_agassizii
ENSORLG00000029854	srsf5b	58	80.214	ENSGGOG00000016462	SRSF5	79	88.462	Gorilla_gorilla
ENSORLG00000029854	srsf5b	100	79.751	ENSHBUG00000012462	srsf5b	93	90.076	Haplochromis_burtoni
ENSORLG00000029854	srsf5b	58	79.679	ENSHGLG00000010147	SRSF5	67	78.238	Heterocephalus_glaber_female
ENSORLG00000029854	srsf5b	58	79.679	ENSHGLG00100015328	SRSF5	67	78.238	Heterocephalus_glaber_male
ENSORLG00000029854	srsf5b	81	47.778	ENSHGLG00100000095	-	62	59.551	Heterocephalus_glaber_male
ENSORLG00000029854	srsf5b	59	86.979	ENSHCOG00000005592	srsf5b	66	87.047	Hippocampus_comes
ENSORLG00000029854	srsf5b	58	79.787	ENSSTOG00000020672	SRSF5	67	78.534	Ictidomys_tridecemlineatus
ENSORLG00000029854	srsf5b	58	79.787	ENSJJAG00000001688	Srsf5	67	78.534	Jaculus_jaculus
ENSORLG00000029854	srsf5b	92	80.405	ENSKMAG00000020486	srsf5b	84	88.462	Kryptolebias_marmoratus
ENSORLG00000029854	srsf5b	100	78.193	ENSLBEG00000013647	srsf5b	100	79.751	Labrus_bergylta
ENSORLG00000029854	srsf5b	58	80.526	ENSLACG00000005874	SRSF5	69	80.412	Latimeria_chalumnae
ENSORLG00000029854	srsf5b	58	84.896	ENSLOCG00000012438	srsf5b	70	82.143	Lepisosteus_oculatus
ENSORLG00000029854	srsf5b	58	79.679	ENSLAFG00000005260	SRSF5	67	78.010	Loxodonta_africana
ENSORLG00000029854	srsf5b	58	80.214	ENSMFAG00000002393	SRSF5	79	88.462	Macaca_fascicularis
ENSORLG00000029854	srsf5b	58	80.214	ENSMNEG00000030872	SRSF5	79	88.462	Macaca_nemestrina
ENSORLG00000029854	srsf5b	58	80.214	ENSMLEG00000030017	SRSF5	79	88.462	Mandrillus_leucophaeus
ENSORLG00000029854	srsf5b	100	79.751	ENSMAMG00000002673	srsf5b	100	80.062	Mastacembelus_armatus
ENSORLG00000029854	srsf5b	100	80.062	ENSMZEG00005003550	srsf5b	100	81.308	Maylandia_zebra
ENSORLG00000029854	srsf5b	58	79.787	ENSMAUG00000009544	Srsf5	67	78.534	Mesocricetus_auratus
ENSORLG00000029854	srsf5b	58	79.787	ENSMICG00000037432	-	79	88.462	Microcebus_murinus
ENSORLG00000029854	srsf5b	58	80.214	ENSMOCG00000013134	Srsf5	67	78.534	Microtus_ochrogaster
ENSORLG00000029854	srsf5b	58	89.894	ENSMMOG00000000137	srsf5b	79	86.260	Mola_mola
ENSORLG00000029854	srsf5b	58	80.749	ENSMODG00000011362	SRSF5	68	79.058	Monodelphis_domestica
ENSORLG00000029854	srsf5b	100	79.257	ENSMALG00000021875	srsf5b	100	80.495	Monopterus_albus
ENSORLG00000029854	srsf5b	58	79.787	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSORLG00000029854	srsf5b	58	79.787	MGP_PahariEiJ_G0029659	Srsf5	68	78.534	Mus_pahari
ENSORLG00000029854	srsf5b	58	79.787	ENSMPUG00000007458	SRSF5	67	78.534	Mustela_putorius_furo
ENSORLG00000029854	srsf5b	58	80.214	ENSMLUG00000011939	SRSF5	65	78.534	Myotis_lucifugus
ENSORLG00000029854	srsf5b	58	79.787	ENSNGAG00000010073	-	67	78.534	Nannospalax_galili
ENSORLG00000029854	srsf5b	100	79.751	ENSNBRG00000001285	srsf5b	100	80.997	Neolamprologus_brichardi
ENSORLG00000029854	srsf5b	58	80.214	ENSNLEG00000001615	SRSF5	79	88.462	Nomascus_leucogenys
ENSORLG00000029854	srsf5b	58	80.214	ENSOPRG00000008286	SRSF5	65	78.534	Ochotona_princeps
ENSORLG00000029854	srsf5b	58	79.235	ENSODEG00000000700	-	69	76.440	Octodon_degus
ENSORLG00000029854	srsf5b	58	80.214	ENSODEG00000013469	-	68	78.534	Octodon_degus
ENSORLG00000029854	srsf5b	100	80.062	ENSONIG00000005759	srsf5b	100	81.308	Oreochromis_niloticus
ENSORLG00000029854	srsf5b	58	76.471	ENSOANG00000013336	SRSF5	68	75.393	Ornithorhynchus_anatinus
ENSORLG00000029854	srsf5b	58	80.214	ENSOCUG00000009274	SRSF5	66	78.534	Oryctolagus_cuniculus
ENSORLG00000029854	srsf5b	100	88.785	ENSORLG00015001720	srsf5b	100	88.785	Oryzias_latipes_hsok
ENSORLG00000029854	srsf5b	93	83.333	ENSOMEG00000020690	srsf5b	67	84.848	Oryzias_melastigma
ENSORLG00000029854	srsf5b	58	80.214	ENSOGAG00000015122	SRSF5	67	78.534	Otolemur_garnettii
ENSORLG00000029854	srsf5b	58	80.214	ENSPPAG00000029921	SRSF5	79	88.462	Pan_paniscus
ENSORLG00000029854	srsf5b	58	79.787	ENSPPRG00000012903	SRSF5	78	88.462	Panthera_pardus
ENSORLG00000029854	srsf5b	58	79.787	ENSPTIG00000018589	SRSF5	78	88.462	Panthera_tigris_altaica
ENSORLG00000029854	srsf5b	58	80.214	ENSPTRG00000006488	SRSF5	79	88.462	Pan_troglodytes
ENSORLG00000029854	srsf5b	58	80.214	ENSPANG00000021091	SRSF5	79	88.462	Papio_anubis
ENSORLG00000029854	srsf5b	58	80.749	ENSPSIG00000012522	SRSF5	69	79.058	Pelodiscus_sinensis
ENSORLG00000029854	srsf5b	58	79.787	ENSPEMG00000020173	Srsf5	68	78.534	Peromyscus_maniculatus_bairdii
ENSORLG00000029854	srsf5b	59	57.009	ENSPMAG00000007790	srsf5b	68	61.616	Petromyzon_marinus
ENSORLG00000029854	srsf5b	58	80.749	ENSPCIG00000011877	SRSF5	68	79.058	Phascolarctos_cinereus
ENSORLG00000029854	srsf5b	92	79.461	ENSPFOG00000017700	srsf5b	89	79.461	Poecilia_formosa
ENSORLG00000029854	srsf5b	92	79.798	ENSPLAG00000006480	srsf5b	89	79.798	Poecilia_latipinna
ENSORLG00000029854	srsf5b	92	79.461	ENSPMEG00000012751	srsf5b	84	90.076	Poecilia_mexicana
ENSORLG00000029854	srsf5b	92	79.461	ENSPREG00000010381	srsf5b	89	78.451	Poecilia_reticulata
ENSORLG00000029854	srsf5b	58	79.787	ENSPPYG00000005945	SRSF5	67	78.534	Pongo_abelii
ENSORLG00000029854	srsf5b	58	79.787	ENSPCOG00000014442	SRSF5	88	73.282	Propithecus_coquereli
ENSORLG00000029854	srsf5b	100	77.882	ENSPNYG00000002669	srsf5b	94	90.076	Pundamilia_nyererei
ENSORLG00000029854	srsf5b	59	87.958	ENSPNAG00000011262	srsf5b	84	85.385	Pygocentrus_nattereri
ENSORLG00000029854	srsf5b	58	79.787	ENSRNOG00000005513	Srsf5	68	78.534	Rattus_norvegicus
ENSORLG00000029854	srsf5b	58	80.214	ENSRBIG00000013003	SRSF5	79	88.462	Rhinopithecus_bieti
ENSORLG00000029854	srsf5b	58	80.214	ENSRROG00000043407	SRSF5	79	88.462	Rhinopithecus_roxellana
ENSORLG00000029854	srsf5b	58	80.214	ENSSBOG00000030784	SRSF5	79	88.462	Saimiri_boliviensis_boliviensis
ENSORLG00000029854	srsf5b	58	80.749	ENSSHAG00000002871	SRSF5	68	79.058	Sarcophilus_harrisii
ENSORLG00000029854	srsf5b	93	71.613	ENSSMAG00000019728	srsf5b	91	71.661	Scophthalmus_maximus
ENSORLG00000029854	srsf5b	90	77.163	ENSSDUG00000005766	srsf5b	92	79.239	Seriola_dumerili
ENSORLG00000029854	srsf5b	100	79.751	ENSSLDG00000023255	srsf5b	100	80.062	Seriola_lalandi_dorsalis
ENSORLG00000029854	srsf5b	58	68.617	ENSSARG00000001059	SRSF5	67	68.394	Sorex_araneus
ENSORLG00000029854	srsf5b	58	78.646	ENSSPUG00000002464	SRSF5	90	74.436	Sphenodon_punctatus
ENSORLG00000029854	srsf5b	100	80.997	ENSSPAG00000015325	srsf5b	100	82.243	Stegastes_partitus
ENSORLG00000029854	srsf5b	58	79.787	ENSSSCG00000032583	SRSF5	67	78.534	Sus_scrofa
ENSORLG00000029854	srsf5b	58	78.571	ENSTGUG00000011425	SRSF5	68	78.495	Taeniopygia_guttata
ENSORLG00000029854	srsf5b	59	87.435	ENSTRUG00000017811	srsf5b	95	72.131	Takifugu_rubripes
ENSORLG00000029854	srsf5b	94	72.277	ENSTNIG00000016411	srsf5b	95	71.044	Tetraodon_nigroviridis
ENSORLG00000029854	srsf5b	58	77.660	ENSTBEG00000001972	SRSF5	66	76.440	Tupaia_belangeri
ENSORLG00000029854	srsf5b	57	80.108	ENSTTRG00000003318	SRSF5	66	78.421	Tursiops_truncatus
ENSORLG00000029854	srsf5b	58	79.787	ENSUAMG00000014184	SRSF5	67	78.534	Ursus_americanus
ENSORLG00000029854	srsf5b	58	84.375	ENSUMAG00000009827	SRSF5	67	78.534	Ursus_maritimus
ENSORLG00000029854	srsf5b	58	79.787	ENSVPAG00000006448	SRSF5	67	78.534	Vicugna_pacos
ENSORLG00000029854	srsf5b	58	79.787	ENSVVUG00000003790	SRSF5	67	78.534	Vulpes_vulpes
ENSORLG00000029854	srsf5b	59	82.703	ENSXETG00000002211	srsf5	68	80.526	Xenopus_tropicalis
ENSORLG00000029854	srsf5b	92	77.441	ENSXCOG00000001570	srsf5b	89	77.441	Xiphophorus_couchianus
ENSORLG00000029854	srsf5b	92	79.461	ENSXMAG00000026416	srsf5b	84	90.840	Xiphophorus_maculatus