EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000030108 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3012 bases
Position: chr17:16135155-16138166
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000028582	RVT_1	PF00078.27	1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000033153	-	3012	-	ENSORLP00000028582	1003 (aa)	-	-

Gene Model

Click here to download ENSORLG00000030108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000030108	-	99	55.332	ENSORLG00000027038	-	80	55.332
ENSORLG00000030108	-	52	32.103	ENSORLG00000024714	-	59	31.919
ENSORLG00000030108	-	97	40.081	ENSORLG00000025257	-	79	40.081
ENSORLG00000030108	-	97	40.181	ENSORLG00000028539	-	79	40.181
ENSORLG00000030108	-	99	40.538	ENSORLG00000027316	-	80	40.538
ENSORLG00000030108	-	99	41.717	ENSORLG00000024361	-	80	41.717
ENSORLG00000030108	-	65	59.538	ENSORLG00000028372	-	67	59.538
ENSORLG00000030108	-	62	31.019	ENSORLG00000027405	-	70	31.019
ENSORLG00000030108	-	98	41.700	ENSORLG00000027382	-	79	41.700
ENSORLG00000030108	-	99	42.116	ENSORLG00000021884	-	80	42.116
ENSORLG00000030108	-	81	55.092	ENSORLG00000026021	-	99	55.066
ENSORLG00000030108	-	99	42.216	ENSORLG00000022718	-	80	42.216
ENSORLG00000030108	-	95	41.925	ENSORLG00000028041	-	99	41.925
ENSORLG00000030108	-	97	40.363	ENSORLG00000028184	-	79	40.363
ENSORLG00000030108	-	97	38.330	ENSORLG00000026865	-	92	38.330
ENSORLG00000030108	-	99	55.131	ENSORLG00000022810	-	91	55.131
ENSORLG00000030108	-	50	30.000	ENSORLG00000022016	-	89	31.120
ENSORLG00000030108	-	69	44.942	ENSORLG00000024817	-	74	44.942
ENSORLG00000030108	-	99	55.030	ENSORLG00000027203	-	80	55.030
ENSORLG00000030108	-	100	97.507	ENSORLG00000022021	-	81	97.507
ENSORLG00000030108	-	99	41.043	ENSORLG00000027119	-	91	40.963
ENSORLG00000030108	-	99	40.538	ENSORLG00000030600	-	85	40.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030108	-	97	40.927	ENSACLG00000016372	-	84	40.927	Astatotilapia_calliptera
ENSORLG00000030108	-	60	45.559	ENSACLG00000013994	-	99	45.559	Astatotilapia_calliptera
ENSORLG00000030108	-	99	40.782	ENSACLG00000014667	-	80	40.782	Astatotilapia_calliptera
ENSORLG00000030108	-	95	48.276	ENSACLG00000006792	-	79	48.276	Astatotilapia_calliptera
ENSORLG00000030108	-	99	39.922	ENSACLG00000005544	-	92	39.922	Astatotilapia_calliptera
ENSORLG00000030108	-	90	47.519	ENSAMXG00000030338	-	77	47.519	Astyanax_mexicanus
ENSORLG00000030108	-	98	41.407	ENSDARG00000103976	BX544877.1	79	41.147	Danio_rerio
ENSORLG00000030108	-	99	40.656	ENSDARG00000100234	BX511246.1	80	40.656	Danio_rerio
ENSORLG00000030108	-	99	40.755	ENSDARG00000099710	BX284696.1	80	40.755	Danio_rerio
ENSORLG00000030108	-	99	40.822	ENSDARG00000105300	BX927081.1	80	40.822	Danio_rerio
ENSORLG00000030108	-	55	42.143	ENSDARG00000097770	si:ch211-167j9.4	98	42.143	Danio_rerio
ENSORLG00000030108	-	56	45.855	ENSDARG00000086849	si:dkey-187k19.2	99	45.855	Danio_rerio
ENSORLG00000030108	-	98	40.603	ENSDARG00000100925	CU104709.1	80	40.581	Danio_rerio
ENSORLG00000030108	-	98	41.407	ENSDARG00000103841	CU024870.1	80	41.147	Danio_rerio
ENSORLG00000030108	-	76	42.653	ENSDARG00000100538	si:dkeyp-88h4.2	98	42.653	Danio_rerio
ENSORLG00000030108	-	95	41.023	ENSDARG00000098557	BX323564.1	99	41.023	Danio_rerio
ENSORLG00000030108	-	89	42.700	ENSKMAG00000018235	-	96	42.700	Kryptolebias_marmoratus
ENSORLG00000030108	-	99	49.652	ENSKMAG00000014582	-	82	49.652	Kryptolebias_marmoratus
ENSORLG00000030108	-	51	61.719	ENSKMAG00000001475	-	92	61.719	Kryptolebias_marmoratus
ENSORLG00000030108	-	98	42.397	ENSKMAG00000011717	-	79	42.397	Kryptolebias_marmoratus
ENSORLG00000030108	-	66	41.555	ENSMZEG00005001249	-	98	41.555	Maylandia_zebra
ENSORLG00000030108	-	62	52.640	ENSONIG00000020693	-	75	52.640	Oreochromis_niloticus
ENSORLG00000030108	-	63	39.596	ENSORLG00020010329	-	98	39.596	Oryzias_latipes_hni
ENSORLG00000030108	-	99	40.659	ENSORLG00020016870	-	80	40.659	Oryzias_latipes_hni
ENSORLG00000030108	-	52	47.148	ENSORLG00020013618	-	67	47.148	Oryzias_latipes_hni
ENSORLG00000030108	-	99	39.723	ENSORLG00020008557	-	91	39.723	Oryzias_latipes_hni
ENSORLG00000030108	-	67	36.711	ENSORLG00020007503	-	100	36.711	Oryzias_latipes_hni
ENSORLG00000030108	-	97	38.235	ENSORLG00020018783	-	99	38.235	Oryzias_latipes_hni
ENSORLG00000030108	-	77	41.078	ENSORLG00020021337	-	77	41.078	Oryzias_latipes_hni
ENSORLG00000030108	-	58	47.160	ENSORLG00020007542	-	69	47.160	Oryzias_latipes_hni
ENSORLG00000030108	-	55	94.343	ENSORLG00020008765	-	69	94.343	Oryzias_latipes_hni
ENSORLG00000030108	-	67	46.131	ENSORLG00020016067	-	72	46.131	Oryzias_latipes_hni
ENSORLG00000030108	-	66	39.344	ENSORLG00020004920	-	98	39.344	Oryzias_latipes_hni
ENSORLG00000030108	-	88	42.650	ENSORLG00020021090	-	99	42.556	Oryzias_latipes_hni
ENSORLG00000030108	-	52	47.148	ENSORLG00020013755	-	67	47.148	Oryzias_latipes_hni
ENSORLG00000030108	-	59	38.143	ENSORLG00020009704	-	98	38.143	Oryzias_latipes_hni
ENSORLG00000030108	-	88	42.539	ENSORLG00020006818	-	99	42.444	Oryzias_latipes_hni
ENSORLG00000030108	-	97	41.913	ENSORLG00015014452	-	79	41.988	Oryzias_latipes_hsok
ENSORLG00000030108	-	73	45.170	ENSORLG00015019437	-	75	45.170	Oryzias_latipes_hsok
ENSORLG00000030108	-	98	49.396	ENSORLG00015007330	-	80	49.396	Oryzias_latipes_hsok
ENSORLG00000030108	-	60	97.162	ENSORLG00015021204	-	72	97.162	Oryzias_latipes_hsok
ENSORLG00000030108	-	99	41.775	ENSORLG00015019816	-	80	41.775	Oryzias_latipes_hsok
ENSORLG00000030108	-	64	41.807	ENSORLG00015001172	-	99	41.807	Oryzias_latipes_hsok
ENSORLG00000030108	-	71	40.578	ENSORLG00015007293	-	97	40.706	Oryzias_latipes_hsok
ENSORLG00000030108	-	98	38.990	ENSOMEG00000015408	-	91	38.990	Oryzias_melastigma
ENSORLG00000030108	-	82	47.470	ENSOMEG00000021029	-	77	47.470	Oryzias_melastigma
ENSORLG00000030108	-	64	40.274	ENSOMEG00000003087	-	99	40.274	Oryzias_melastigma
ENSORLG00000030108	-	73	56.157	ENSOMEG00000003915	-	100	56.157	Oryzias_melastigma
ENSORLG00000030108	-	84	41.560	ENSPKIG00000020531	-	81	41.560	Paramormyrops_kingsleyae
ENSORLG00000030108	-	61	40.620	ENSPFOG00000023623	-	95	40.620	Poecilia_formosa
ENSORLG00000030108	-	62	39.326	ENSPFOG00000013154	-	75	39.234	Poecilia_formosa
ENSORLG00000030108	-	59	37.252	ENSPMEG00000007764	-	98	37.252	Poecilia_mexicana
ENSORLG00000030108	-	77	42.303	ENSXMAG00000022515	-	81	42.303	Xiphophorus_maculatus
ENSORLG00000030108	-	97	39.394	ENSXMAG00000026019	-	89	39.394	Xiphophorus_maculatus
ENSORLG00000030108	-	98	40.100	ENSXMAG00000024671	-	87	40.100	Xiphophorus_maculatus