EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000030211 (Gene tree)
Gene ID: 101160053
Gene Symbol: grsf1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein H2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6691 bases
Position: chr9:677112-683802
Accession: 101160053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000038412	RRM_1	PF00076.22	9.9e-25	1	2
ENSORLP00000038412	RRM_1	PF00076.22	9.9e-25	2	2
ENSORLP00000035685	RRM_1	PF00076.22	2.2e-19	1	2
ENSORLP00000035685	RRM_1	PF00076.22	2.2e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045381	-	4198	XM_023958117	ENSORLP00000038412	384 (aa)	XP_023813885	UPI000CE23531
ENSORLT00000031109	-	5841	-	ENSORLP00000035685	389 (aa)	-	-

Gene Model

Click here to download ENSORLG00000030211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000030211	grsf1	78	48.800	ENSORLG00000006932	hnrnph1	82	48.800
ENSORLG00000030211	grsf1	79	54.945	ENSORLG00000010499	hnrnph3	91	54.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030211	grsf1	99	63.198	ENSAPOG00000012487	grsf1	99	63.198	Acanthochromis_polyacanthus
ENSORLG00000030211	grsf1	99	62.435	ENSACIG00000005871	grsf1	99	62.532	Amphilophus_citrinellus
ENSORLG00000030211	grsf1	99	64.810	ENSAOCG00000017462	-	99	64.810	Amphiprion_ocellaris
ENSORLG00000030211	grsf1	99	63.636	ENSAPEG00000007240	-	99	63.636	Amphiprion_percula
ENSORLG00000030211	grsf1	99	59.137	ENSATEG00000007185	grsf1	99	59.137	Anabas_testudineus
ENSORLG00000030211	grsf1	99	63.131	ENSACLG00000003685	-	99	63.131	Astatotilapia_calliptera
ENSORLG00000030211	grsf1	98	47.896	ENSAMXG00000012270	grsf1	98	47.896	Astyanax_mexicanus
ENSORLG00000030211	grsf1	99	61.564	ENSCSEG00000019209	-	99	62.541	Cynoglossus_semilaevis
ENSORLG00000030211	grsf1	89	65.318	ENSCVAG00000004476	grsf1	88	65.318	Cyprinodon_variegatus
ENSORLG00000030211	grsf1	99	44.250	ENSDARG00000053021	grsf1	96	44.250	Danio_rerio
ENSORLG00000030211	grsf1	89	50.143	ENSFHEG00000013358	-	85	50.470	Fundulus_heteroclitus
ENSORLG00000030211	grsf1	77	51.852	ENSGMOG00000014047	grsf1	99	51.852	Gadus_morhua
ENSORLG00000030211	grsf1	98	59.645	ENSGAFG00000004496	grsf1	98	59.645	Gambusia_affinis
ENSORLG00000030211	grsf1	78	58.769	ENSGACG00000014447	grsf1	97	58.769	Gasterosteus_aculeatus
ENSORLG00000030211	grsf1	99	63.038	ENSHBUG00000006284	grsf1	99	63.038	Haplochromis_burtoni
ENSORLG00000030211	grsf1	84	59.517	ENSHCOG00000007715	-	84	59.517	Hippocampus_comes
ENSORLG00000030211	grsf1	81	50.000	ENSIPUG00000010533	grsf1	80	50.000	Ictalurus_punctatus
ENSORLG00000030211	grsf1	90	62.060	ENSKMAG00000004528	grsf1	87	62.060	Kryptolebias_marmoratus
ENSORLG00000030211	grsf1	78	55.082	ENSLBEG00000018100	grsf1	96	54.984	Labrus_bergylta
ENSORLG00000030211	grsf1	98	60.406	ENSMAMG00000002627	grsf1	98	60.406	Mastacembelus_armatus
ENSORLG00000030211	grsf1	99	62.626	ENSMZEG00005020633	-	99	62.626	Maylandia_zebra
ENSORLG00000030211	grsf1	89	62.500	ENSMMOG00000014231	grsf1	98	58.839	Mola_mola
ENSORLG00000030211	grsf1	97	57.035	ENSMALG00000000251	grsf1	98	57.035	Monopterus_albus
ENSORLG00000030211	grsf1	98	61.795	ENSNBRG00000017774	grsf1	95	61.795	Neolamprologus_brichardi
ENSORLG00000030211	grsf1	99	63.198	ENSONIG00000014119	grsf1	99	63.198	Oreochromis_niloticus
ENSORLG00000030211	grsf1	100	96.094	ENSORLG00020014383	grsf1	100	96.094	Oryzias_latipes_hni
ENSORLG00000030211	grsf1	100	97.135	ENSORLG00015006520	grsf1	100	97.135	Oryzias_latipes_hsok
ENSORLG00000030211	grsf1	99	80.418	ENSOMEG00000009181	grsf1	100	81.723	Oryzias_melastigma
ENSORLG00000030211	grsf1	86	54.467	ENSPKIG00000019432	grsf1	83	54.467	Paramormyrops_kingsleyae
ENSORLG00000030211	grsf1	82	61.377	ENSPMGG00000013654	grsf1	92	61.377	Periophthalmus_magnuspinnatus
ENSORLG00000030211	grsf1	98	57.320	ENSPFOG00000006122	grsf1	99	57.072	Poecilia_formosa
ENSORLG00000030211	grsf1	98	57.895	ENSPLAG00000020977	grsf1	99	57.644	Poecilia_latipinna
ENSORLG00000030211	grsf1	98	57.816	ENSPMEG00000012485	grsf1	99	57.568	Poecilia_mexicana
ENSORLG00000030211	grsf1	98	58.000	ENSPREG00000013383	grsf1	99	57.750	Poecilia_reticulata
ENSORLG00000030211	grsf1	99	64.286	ENSPNYG00000005379	grsf1	99	64.286	Pundamilia_nyererei
ENSORLG00000030211	grsf1	82	53.416	ENSPNAG00000014912	grsf1	78	53.416	Pygocentrus_nattereri
ENSORLG00000030211	grsf1	80	47.097	ENSSFOG00015014620	grsf1	81	49.049	Scleropages_formosus
ENSORLG00000030211	grsf1	82	62.813	ENSSMAG00000014181	grsf1	70	62.813	Scophthalmus_maximus
ENSORLG00000030211	grsf1	99	58.500	ENSSDUG00000009397	-	97	63.746	Seriola_dumerili
ENSORLG00000030211	grsf1	99	58.543	ENSSLDG00000025494	grsf1	97	60.857	Seriola_lalandi_dorsalis
ENSORLG00000030211	grsf1	99	59.033	ENSSPAG00000023296	grsf1	99	59.033	Stegastes_partitus
ENSORLG00000030211	grsf1	91	59.669	ENSTRUG00000015354	grsf1	99	57.252	Takifugu_rubripes
ENSORLG00000030211	grsf1	81	59.406	ENSTNIG00000015350	-	96	60.535	Tetraodon_nigroviridis
ENSORLG00000030211	grsf1	98	58.396	ENSXMAG00000029710	grsf1	99	58.396	Xiphophorus_maculatus