EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000030235 (Gene tree)
Gene ID: 101164182
Gene Symbol: -
Alias: -
Full Name: myocardin
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 16677 bases
Position: chr16:19559083-19575759
Accession: 101164182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000026518	SAP	PF02037.27	7.6e-11	1	1
ENSORLP00000040276	SAP	PF02037.27	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000032874	-	6461	XM_011485376	ENSORLP00000026518	798 (aa)	XP_011483678	UPI0005CBDF16
ENSORLT00000028522	-	6320	XM_011485378	ENSORLP00000040276	751 (aa)	XP_011483680	UPI0005CBCFB5

Gene Model

Click here to download ENSORLG00000030235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030235	-	58	56.492	ENSAPEG00000008636	-	89	52.640	Amphiprion_percula
ENSORLG00000030235	-	82	48.521	ENSAMXG00000043075	-	99	48.071	Astyanax_mexicanus
ENSORLG00000030235	-	75	45.364	ENSGMOG00000004700	-	100	44.186	Gadus_morhua
ENSORLG00000030235	-	63	68.076	ENSLBEG00000016654	-	99	62.069	Labrus_bergylta
ENSORLG00000030235	-	100	98.003	ENSORLG00020007234	-	100	98.003	Oryzias_latipes_hni
ENSORLG00000030235	-	100	97.503	ENSORLG00015013079	-	100	97.503	Oryzias_latipes_hsok
ENSORLG00000030235	-	65	68.936	ENSPREG00000008236	-	98	68.085	Poecilia_reticulata
ENSORLG00000030235	-	65	67.094	ENSXCOG00000019419	-	97	67.949	Xiphophorus_couchianus