EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000030385 (Gene tree)
Gene ID: 101161853
Gene Symbol: -
Alias: -
Full Name: protein STIP1 homolog
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 13137 bases
Position: chr18:13613533-13626669
Accession: 101161853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000031767	RRM_1	PF00076.22	3.4e-13	1	1
ENSORLP00000044369	RRM_1	PF00076.22	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046041	-	5270	XM_004084591	ENSORLP00000044369	617 (aa)	XP_004084639	UPI0002A4A673
ENSORLT00000035909	-	5194	-	ENSORLP00000031767	617 (aa)	-	UPI0002A4A673

Gene Model

Click here to download ENSORLG00000030385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000030385	-	50	38.511	ENSORLG00000029651	si:dkey-33c12.4	74	33.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030385	-	58	31.268	ENSAPOG00000019633	zgc:123010	83	34.177	Acanthochromis_polyacanthus
ENSORLG00000030385	-	70	37.234	ENSAPOG00000005058	si:dkey-33c12.4	76	36.923	Acanthochromis_polyacanthus
ENSORLG00000030385	-	99	54.351	ENSAPOG00000022403	-	99	54.671	Acanthochromis_polyacanthus
ENSORLG00000030385	-	58	31.549	ENSAOCG00000005910	zgc:123010	76	35.211	Amphiprion_ocellaris
ENSORLG00000030385	-	99	53.976	ENSAOCG00000000431	-	99	55.352	Amphiprion_ocellaris
ENSORLG00000030385	-	55	40.857	ENSAOCG00000020066	si:dkey-33c12.4	76	36.154	Amphiprion_ocellaris
ENSORLG00000030385	-	58	31.549	ENSAPEG00000014305	zgc:123010	81	34.177	Amphiprion_percula
ENSORLG00000030385	-	99	53.636	ENSAPEG00000023603	-	99	54.932	Amphiprion_percula
ENSORLG00000030385	-	64	36.427	ENSATEG00000018885	si:dkey-33c12.4	79	34.706	Anabas_testudineus
ENSORLG00000030385	-	58	32.676	ENSATEG00000001220	zgc:123010	70	30.892	Anabas_testudineus
ENSORLG00000030385	-	99	53.120	ENSATEG00000018302	-	99	55.222	Anabas_testudineus
ENSORLG00000030385	-	53	39.437	ENSATEG00000022160	-	71	39.437	Anabas_testudineus
ENSORLG00000030385	-	55	39.437	ENSACLG00000012346	-	71	39.437	Astatotilapia_calliptera
ENSORLG00000030385	-	61	34.177	ENSACLG00000010188	zgc:123010	76	34.177	Astatotilapia_calliptera
ENSORLG00000030385	-	69	36.404	ENSACLG00000014192	si:dkey-33c12.4	90	34.991	Astatotilapia_calliptera
ENSORLG00000030385	-	95	56.390	ENSACLG00000003019	-	99	58.173	Astatotilapia_calliptera
ENSORLG00000030385	-	72	42.060	ENSAMXG00000010871	si:dkey-33c12.4	82	40.142	Astyanax_mexicanus
ENSORLG00000030385	-	58	32.394	ENSAMXG00000041967	zgc:123010	54	32.394	Astyanax_mexicanus
ENSORLG00000030385	-	97	47.114	ENSCSEG00000002755	-	97	49.918	Cynoglossus_semilaevis
ENSORLG00000030385	-	58	30.986	ENSCVAG00000013288	zgc:123010	76	34.177	Cyprinodon_variegatus
ENSORLG00000030385	-	95	57.561	ENSCVAG00000004187	-	100	58.442	Cyprinodon_variegatus
ENSORLG00000030385	-	60	46.392	ENSDARG00000057890	si:dkey-33c12.4	75	43.056	Danio_rerio
ENSORLG00000030385	-	77	40.385	ENSELUG00000002009	si:dkey-33c12.4	87	39.891	Esox_lucius
ENSORLG00000030385	-	77	44.600	ENSELUG00000001633	-	90	40.359	Esox_lucius
ENSORLG00000030385	-	60	32.075	ENSELUG00000021447	-	77	31.522	Esox_lucius
ENSORLG00000030385	-	90	57.439	ENSFHEG00000009983	-	96	58.377	Fundulus_heteroclitus
ENSORLG00000030385	-	75	30.835	ENSGALG00000036747	TTC31	76	31.250	Gallus_gallus
ENSORLG00000030385	-	99	54.854	ENSGAFG00000016594	-	99	55.778	Gambusia_affinis
ENSORLG00000030385	-	57	36.735	ENSGAFG00000009373	zgc:123010	71	36.735	Gambusia_affinis
ENSORLG00000030385	-	58	31.933	ENSGACG00000007620	zgc:123010	76	31.933	Gasterosteus_aculeatus
ENSORLG00000030385	-	54	45.022	ENSGACG00000004936	-	82	45.022	Gasterosteus_aculeatus
ENSORLG00000030385	-	55	39.437	ENSHBUG00000016720	-	71	39.437	Haplochromis_burtoni
ENSORLG00000030385	-	69	36.036	ENSHBUG00000010735	si:dkey-33c12.4	87	35.204	Haplochromis_burtoni
ENSORLG00000030385	-	60	47.906	ENSIPUG00000005998	si:dkey-33c12.4	85	40.070	Ictalurus_punctatus
ENSORLG00000030385	-	95	58.699	ENSKMAG00000006468	-	97	58.564	Kryptolebias_marmoratus
ENSORLG00000030385	-	52	40.673	ENSKMAG00000016610	si:dkey-33c12.4	79	34.100	Kryptolebias_marmoratus
ENSORLG00000030385	-	99	49.002	ENSLBEG00000028046	-	99	48.154	Labrus_bergylta
ENSORLG00000030385	-	60	36.620	ENSLBEG00000023984	zgc:123010	76	35.443	Labrus_bergylta
ENSORLG00000030385	-	56	39.031	ENSLBEG00000017203	-	56	38.418	Labrus_bergylta
ENSORLG00000030385	-	56	38.592	ENSLBEG00000021088	-	54	38.527	Labrus_bergylta
ENSORLG00000030385	-	79	38.046	ENSLACG00000004602	-	65	51.452	Latimeria_chalumnae
ENSORLG00000030385	-	58	31.933	ENSLOCG00000008967	zgc:123010	75	30.568	Lepisosteus_oculatus
ENSORLG00000030385	-	74	44.612	ENSLOCG00000001861	-	87	41.000	Lepisosteus_oculatus
ENSORLG00000030385	-	53	37.557	ENSMAMG00000002460	-	68	37.557	Mastacembelus_armatus
ENSORLG00000030385	-	95	49.762	ENSMAMG00000004311	-	99	49.131	Mastacembelus_armatus
ENSORLG00000030385	-	63	37.441	ENSMAMG00000000111	si:dkey-33c12.4	78	35.328	Mastacembelus_armatus
ENSORLG00000030385	-	95	57.212	ENSMZEG00005000585	-	99	58.173	Maylandia_zebra
ENSORLG00000030385	-	61	34.177	ENSMZEG00005027733	zgc:123010	76	34.177	Maylandia_zebra
ENSORLG00000030385	-	69	36.404	ENSMZEG00005014276	si:dkey-33c12.4	87	35.355	Maylandia_zebra
ENSORLG00000030385	-	99	54.268	ENSMALG00000003167	-	98	55.099	Monopterus_albus
ENSORLG00000030385	-	51	42.284	ENSMALG00000002265	si:dkey-33c12.4	78	35.926	Monopterus_albus
ENSORLG00000030385	-	51	41.270	ENSONIG00000012263	-	85	40.549	Oreochromis_niloticus
ENSORLG00000030385	-	61	34.177	ENSONIG00000018353	zgc:123010	81	34.177	Oreochromis_niloticus
ENSORLG00000030385	-	96	57.278	ENSONIG00000007538	-	98	58.889	Oreochromis_niloticus
ENSORLG00000030385	-	56	36.416	ENSORLG00020008750	si:dkey-33c12.4	51	37.006	Oryzias_latipes_hni
ENSORLG00000030385	-	100	97.249	ENSORLG00015008400	-	100	97.249	Oryzias_latipes_hsok
ENSORLG00000030385	-	100	82.297	ENSOMEG00000009428	-	100	82.297	Oryzias_melastigma
ENSORLG00000030385	-	58	30.986	ENSOMEG00000003408	zgc:123010	55	30.986	Oryzias_melastigma
ENSORLG00000030385	-	79	43.478	ENSPKIG00000011819	-	73	44.600	Paramormyrops_kingsleyae
ENSORLG00000030385	-	73	58.628	ENSPFOG00000017092	-	98	61.044	Poecilia_formosa
ENSORLG00000030385	-	58	32.022	ENSPLAG00000007711	zgc:123010	76	30.193	Poecilia_latipinna
ENSORLG00000030385	-	58	32.022	ENSPMEG00000005092	zgc:123010	76	31.064	Poecilia_mexicana
ENSORLG00000030385	-	96	57.235	ENSPMEG00000009905	-	98	58.173	Poecilia_mexicana
ENSORLG00000030385	-	96	55.662	ENSPREG00000016861	-	98	57.302	Poecilia_reticulata
ENSORLG00000030385	-	58	30.471	ENSPNYG00000023304	-	70	30.471	Pundamilia_nyererei
ENSORLG00000030385	-	61	34.177	ENSPNYG00000007893	zgc:123010	76	34.177	Pundamilia_nyererei
ENSORLG00000030385	-	69	36.404	ENSPNYG00000018262	si:dkey-33c12.4	87	35.355	Pundamilia_nyererei
ENSORLG00000030385	-	95	57.372	ENSPNYG00000001047	-	99	58.333	Pundamilia_nyererei
ENSORLG00000030385	-	60	48.556	ENSPNAG00000018386	si:dkey-33c12.4	81	42.238	Pygocentrus_nattereri
ENSORLG00000030385	-	58	31.742	ENSPNAG00000007579	zgc:123010	56	31.742	Pygocentrus_nattereri
ENSORLG00000030385	-	70	30.787	ENSSFOG00015021394	zgc:123010	71	30.641	Scleropages_formosus
ENSORLG00000030385	-	64	43.902	ENSSFOG00015009199	-	85	37.329	Scleropages_formosus
ENSORLG00000030385	-	60	49.189	ENSSFOG00015005186	-	61	48.010	Scleropages_formosus
ENSORLG00000030385	-	51	41.304	ENSSMAG00000008147	si:dkey-33c12.4	50	40.503	Scophthalmus_maximus
ENSORLG00000030385	-	97	54.219	ENSSMAG00000010960	-	97	55.000	Scophthalmus_maximus
ENSORLG00000030385	-	69	31.773	ENSSMAG00000002904	zgc:123010	76	34.177	Scophthalmus_maximus
ENSORLG00000030385	-	70	36.306	ENSSDUG00000003213	si:dkey-33c12.4	85	36.210	Seriola_dumerili
ENSORLG00000030385	-	95	57.212	ENSSDUG00000010976	-	99	57.097	Seriola_dumerili
ENSORLG00000030385	-	60	38.325	ENSSLDG00000009448	si:dkey-33c12.4	88	33.766	Seriola_lalandi_dorsalis
ENSORLG00000030385	-	91	57.475	ENSSLDG00000012846	-	99	57.591	Seriola_lalandi_dorsalis
ENSORLG00000030385	-	51	43.168	ENSSPAG00000022577	-	77	35.609	Stegastes_partitus
ENSORLG00000030385	-	69	30.137	ENSSPAG00000013621	zgc:123010	76	30.342	Stegastes_partitus
ENSORLG00000030385	-	99	54.198	ENSSPAG00000004843	-	99	55.945	Stegastes_partitus
ENSORLG00000030385	-	58	30.532	ENSTRUG00000024824	zgc:123010	59	30.079	Takifugu_rubripes
ENSORLG00000030385	-	95	40.625	ENSTRUG00000000057	-	96	39.737	Takifugu_rubripes
ENSORLG00000030385	-	54	39.306	ENSXMAG00000018535	si:dkey-33c12.4	78	33.837	Xiphophorus_maculatus