EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000030429 (Gene tree)
Gene ID: 101168246
Gene Symbol: si:ch211-212k18.5
Alias: -
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7901 bases
Position: chr18:17652955-17660855
Accession: 101168246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000044546	zf-C2H2	PF00096.26	1.6e-18	1	2
ENSORLP00000044546	zf-C2H2	PF00096.26	1.6e-18	2	2
ENSORLP00000044546	zf-met	PF12874.7	4.3e-11	1	2
ENSORLP00000044546	zf-met	PF12874.7	4.3e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000042925	-	5545	XM_011487551	ENSORLP00000044546	1180 (aa)	XP_011485853	UPI0002A4CDAD

Gene Model

Click here to download ENSORLG00000030429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000030429	si:ch211-212k18.5	68	46.533	ENSORLG00000026871	sall2	58	44.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030429	si:ch211-212k18.5	55	46.976	ENSAPOG00000015347	sall2	54	48.062	Acanthochromis_polyacanthus
ENSORLG00000030429	si:ch211-212k18.5	99	71.276	ENSAPOG00000013387	si:ch211-212k18.5	99	71.934	Acanthochromis_polyacanthus
ENSORLG00000030429	si:ch211-212k18.5	78	79.215	ENSACIG00000019922	si:ch211-212k18.5	96	79.958	Amphilophus_citrinellus
ENSORLG00000030429	si:ch211-212k18.5	100	69.318	ENSAOCG00000010737	si:ch211-212k18.5	100	69.131	Amphiprion_ocellaris
ENSORLG00000030429	si:ch211-212k18.5	100	69.481	ENSAPEG00000006751	si:ch211-212k18.5	100	69.293	Amphiprion_percula
ENSORLG00000030429	si:ch211-212k18.5	55	46.976	ENSAPEG00000020215	sall2	84	46.624	Amphiprion_percula
ENSORLG00000030429	si:ch211-212k18.5	77	79.132	ENSATEG00000001254	si:ch211-212k18.5	100	80.539	Anabas_testudineus
ENSORLG00000030429	si:ch211-212k18.5	99	69.925	ENSACLG00000009709	si:ch211-212k18.5	99	70.968	Astatotilapia_calliptera
ENSORLG00000030429	si:ch211-212k18.5	59	58.824	ENSACLG00000019867	sall2	61	45.202	Astatotilapia_calliptera
ENSORLG00000030429	si:ch211-212k18.5	97	53.176	ENSAMXG00000010979	si:ch211-212k18.5	99	53.367	Astyanax_mexicanus
ENSORLG00000030429	si:ch211-212k18.5	54	49.353	ENSAMXG00000020956	sall2	63	49.564	Astyanax_mexicanus
ENSORLG00000030429	si:ch211-212k18.5	79	38.243	ENSCSEG00000021148	sall2	79	37.956	Cynoglossus_semilaevis
ENSORLG00000030429	si:ch211-212k18.5	99	67.105	ENSCSEG00000004426	si:ch211-212k18.5	99	66.667	Cynoglossus_semilaevis
ENSORLG00000030429	si:ch211-212k18.5	99	68.382	ENSCVAG00000007475	si:ch211-212k18.5	99	69.098	Cyprinodon_variegatus
ENSORLG00000030429	si:ch211-212k18.5	58	65.854	ENSCVAG00000006032	sall2	59	45.515	Cyprinodon_variegatus
ENSORLG00000030429	si:ch211-212k18.5	68	48.515	ENSDARG00000075116	sall2	73	48.085	Danio_rerio
ENSORLG00000030429	si:ch211-212k18.5	99	53.597	ENSDARG00000103316	si:ch211-212k18.5	98	53.081	Danio_rerio
ENSORLG00000030429	si:ch211-212k18.5	74	71.795	ENSELUG00000004389	sall2	68	75.862	Esox_lucius
ENSORLG00000030429	si:ch211-212k18.5	98	54.852	ENSELUG00000024534	si:ch211-212k18.5	99	54.485	Esox_lucius
ENSORLG00000030429	si:ch211-212k18.5	55	45.609	ENSFHEG00000017550	sall2	58	45.394	Fundulus_heteroclitus
ENSORLG00000030429	si:ch211-212k18.5	99	69.092	ENSFHEG00000017264	si:ch211-212k18.5	99	69.779	Fundulus_heteroclitus
ENSORLG00000030429	si:ch211-212k18.5	100	68.954	ENSGAFG00000003746	si:ch211-212k18.5	100	69.036	Gambusia_affinis
ENSORLG00000030429	si:ch211-212k18.5	58	71.875	ENSGAFG00000015194	sall2	59	45.170	Gambusia_affinis
ENSORLG00000030429	si:ch211-212k18.5	99	69.925	ENSHBUG00000019672	si:ch211-212k18.5	100	71.034	Haplochromis_burtoni
ENSORLG00000030429	si:ch211-212k18.5	55	46.028	ENSHBUG00000002882	sall2	55	45.649	Haplochromis_burtoni
ENSORLG00000030429	si:ch211-212k18.5	99	59.550	ENSHCOG00000002842	si:ch211-212k18.5	99	59.766	Hippocampus_comes
ENSORLG00000030429	si:ch211-212k18.5	97	52.145	ENSIPUG00000002559	sall2	96	50.166	Ictalurus_punctatus
ENSORLG00000030429	si:ch211-212k18.5	99	70.106	ENSKMAG00000019657	si:ch211-212k18.5	99	70.779	Kryptolebias_marmoratus
ENSORLG00000030429	si:ch211-212k18.5	99	67.297	ENSLBEG00000020887	si:ch211-212k18.5	99	67.214	Labrus_bergylta
ENSORLG00000030429	si:ch211-212k18.5	66	45.700	ENSMAMG00000016229	sall2	59	44.000	Mastacembelus_armatus
ENSORLG00000030429	si:ch211-212k18.5	71	79.977	ENSMAMG00000015887	si:ch211-212k18.5	99	79.720	Mastacembelus_armatus
ENSORLG00000030429	si:ch211-212k18.5	99	70.008	ENSMZEG00005021214	si:ch211-212k18.5	99	71.050	Maylandia_zebra
ENSORLG00000030429	si:ch211-212k18.5	55	46.028	ENSMZEG00005012103	sall2	55	45.202	Maylandia_zebra
ENSORLG00000030429	si:ch211-212k18.5	90	78.668	ENSMMOG00000012726	si:ch211-212k18.5	98	78.668	Mola_mola
ENSORLG00000030429	si:ch211-212k18.5	92	68.887	ENSMALG00000000979	si:ch211-212k18.5	97	68.975	Monopterus_albus
ENSORLG00000030429	si:ch211-212k18.5	94	67.776	ENSNBRG00000023948	si:ch211-212k18.5	99	66.778	Neolamprologus_brichardi
ENSORLG00000030429	si:ch211-212k18.5	95	38.564	ENSNBRG00000017645	sall2	99	38.617	Neolamprologus_brichardi
ENSORLG00000030429	si:ch211-212k18.5	100	98.136	ENSORLG00020008145	si:ch211-212k18.5	100	98.136	Oryzias_latipes_hni
ENSORLG00000030429	si:ch211-212k18.5	54	46.533	ENSORLG00020007873	sall2	58	45.040	Oryzias_latipes_hni
ENSORLG00000030429	si:ch211-212k18.5	100	98.390	ENSORLG00015004982	si:ch211-212k18.5	100	98.390	Oryzias_latipes_hsok
ENSORLG00000030429	si:ch211-212k18.5	54	46.729	ENSORLG00015002422	sall2	58	45.101	Oryzias_latipes_hsok
ENSORLG00000030429	si:ch211-212k18.5	56	45.408	ENSOMEG00000012904	sall2	59	45.752	Oryzias_melastigma
ENSORLG00000030429	si:ch211-212k18.5	100	89.716	ENSOMEG00000013949	si:ch211-212k18.5	100	90.067	Oryzias_melastigma
ENSORLG00000030429	si:ch211-212k18.5	95	63.748	ENSPMGG00000018714	si:ch211-212k18.5	99	63.660	Periophthalmus_magnuspinnatus
ENSORLG00000030429	si:ch211-212k18.5	59	55.102	ENSPFOG00000016504	sall2	61	46.133	Poecilia_formosa
ENSORLG00000030429	si:ch211-212k18.5	99	68.977	ENSPFOG00000023705	si:ch211-212k18.5	99	70.609	Poecilia_formosa
ENSORLG00000030429	si:ch211-212k18.5	59	55.102	ENSPLAG00000018320	sall2	59	45.953	Poecilia_latipinna
ENSORLG00000030429	si:ch211-212k18.5	99	69.123	ENSPLAG00000002577	si:ch211-212k18.5	99	69.619	Poecilia_latipinna
ENSORLG00000030429	si:ch211-212k18.5	99	68.977	ENSPMEG00000016395	si:ch211-212k18.5	99	70.435	Poecilia_mexicana
ENSORLG00000030429	si:ch211-212k18.5	59	55.102	ENSPMEG00000006335	sall2	59	45.065	Poecilia_mexicana
ENSORLG00000030429	si:ch211-212k18.5	99	69.868	ENSPREG00000005292	si:ch211-212k18.5	99	69.950	Poecilia_reticulata
ENSORLG00000030429	si:ch211-212k18.5	61	55.102	ENSPREG00000021908	sall2	58	45.718	Poecilia_reticulata
ENSORLG00000030429	si:ch211-212k18.5	99	66.944	ENSPNYG00000021576	si:ch211-212k18.5	99	67.993	Pundamilia_nyererei
ENSORLG00000030429	si:ch211-212k18.5	64	49.231	ENSPNAG00000021463	sall2	58	48.729	Pygocentrus_nattereri
ENSORLG00000030429	si:ch211-212k18.5	95	55.623	ENSPNAG00000006123	si:ch211-212k18.5	94	54.305	Pygocentrus_nattereri
ENSORLG00000030429	si:ch211-212k18.5	100	68.348	ENSSMAG00000006241	si:ch211-212k18.5	100	68.160	Scophthalmus_maximus
ENSORLG00000030429	si:ch211-212k18.5	78	57.627	ENSSMAG00000014157	sall2	67	43.794	Scophthalmus_maximus
ENSORLG00000030429	si:ch211-212k18.5	99	71.675	ENSSDUG00000006164	si:ch211-212k18.5	99	71.652	Seriola_dumerili
ENSORLG00000030429	si:ch211-212k18.5	59	55.932	ENSSDUG00000012274	sall2	53	46.044	Seriola_dumerili
ENSORLG00000030429	si:ch211-212k18.5	99	73.645	ENSSLDG00000003393	si:ch211-212k18.5	99	73.131	Seriola_lalandi_dorsalis
ENSORLG00000030429	si:ch211-212k18.5	76	55.932	ENSSLDG00000001653	sall2	53	46.928	Seriola_lalandi_dorsalis
ENSORLG00000030429	si:ch211-212k18.5	95	70.329	ENSSPAG00000013435	si:ch211-212k18.5	97	70.563	Stegastes_partitus
ENSORLG00000030429	si:ch211-212k18.5	67	47.742	ENSSPAG00000023009	sall2	54	46.831	Stegastes_partitus
ENSORLG00000030429	si:ch211-212k18.5	59	54.545	ENSTRUG00000024556	sall2	59	43.421	Takifugu_rubripes
ENSORLG00000030429	si:ch211-212k18.5	73	72.883	ENSTRUG00000025082	si:ch211-212k18.5	80	72.633	Takifugu_rubripes
ENSORLG00000030429	si:ch211-212k18.5	99	67.081	ENSXCOG00000000762	si:ch211-212k18.5	100	67.184	Xiphophorus_couchianus
ENSORLG00000030429	si:ch211-212k18.5	55	45.844	ENSXMAG00000000902	sall2	59	45.396	Xiphophorus_maculatus
ENSORLG00000030429	si:ch211-212k18.5	99	68.963	ENSXMAG00000001461	si:ch211-212k18.5	100	68.571	Xiphophorus_maculatus