EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000030544 (Gene tree)
Gene ID: 101166689
Gene Symbol: ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 27330 bases
Position: chr12:77483-104812
Accession: 101166689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000044169	YTH	PF04146.15	1.6e-40	1	1
ENSORLP00000041272	YTH	PF04146.15	1.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000043509	-	7453	-	ENSORLP00000041272	695 (aa)	-	-
ENSORLT00000029355	-	7679	XM_023960834	ENSORLP00000044169	665 (aa)	XP_023816602	UPI000CE1B1DF

Gene Model

Click here to download ENSORLG00000030544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030544	ythdc1	60	66.988	ENSG00000083896	YTHDC1	56	61.111	Homo_sapiens
ENSORLG00000030544	ythdc1	83	77.580	ENSAPOG00000013997	ythdc1	93	72.057	Acanthochromis_polyacanthus
ENSORLG00000030544	ythdc1	82	76.528	ENSACIG00000019728	ythdc1	91	77.206	Amphilophus_citrinellus
ENSORLG00000030544	ythdc1	95	80.125	ENSAOCG00000000239	ythdc1	94	81.690	Amphiprion_ocellaris
ENSORLG00000030544	ythdc1	84	80.177	ENSAPEG00000000618	ythdc1	89	80.639	Amphiprion_percula
ENSORLG00000030544	ythdc1	83	79.107	ENSATEG00000023007	ythdc1	91	79.323	Anabas_testudineus
ENSORLG00000030544	ythdc1	93	56.072	ENSAPLG00000009921	YTHDC1	50	67.935	Anas_platyrhynchos
ENSORLG00000030544	ythdc1	94	56.541	ENSACAG00000009697	YTHDC1	93	53.111	Anolis_carolinensis
ENSORLG00000030544	ythdc1	60	66.988	ENSANAG00000001522	YTHDC1	56	61.111	Aotus_nancymaae
ENSORLG00000030544	ythdc1	95	81.250	ENSACLG00000019371	ythdc1	94	82.473	Astatotilapia_calliptera
ENSORLG00000030544	ythdc1	94	63.020	ENSAMXG00000006978	ythdc1	92	59.938	Astyanax_mexicanus
ENSORLG00000030544	ythdc1	60	66.988	ENSCJAG00000009934	YTHDC1	56	61.111	Callithrix_jacchus
ENSORLG00000030544	ythdc1	61	68.856	ENSCAFG00020027112	YTHDC1	57	58.050	Canis_lupus_dingo
ENSORLG00000030544	ythdc1	60	66.988	ENSTSYG00000011668	YTHDC1	56	61.111	Carlito_syrichta
ENSORLG00000030544	ythdc1	92	42.462	ENSCAPG00000008722	YTHDC1	89	38.124	Cavia_aperea
ENSORLG00000030544	ythdc1	60	58.696	ENSCPOG00000010929	YTHDC1	90	47.470	Cavia_porcellus
ENSORLG00000030544	ythdc1	60	66.988	ENSCCAG00000035754	YTHDC1	56	61.111	Cebus_capucinus
ENSORLG00000030544	ythdc1	60	66.988	ENSCATG00000036320	YTHDC1	56	61.111	Cercocebus_atys
ENSORLG00000030544	ythdc1	93	55.306	ENSCLAG00000005482	YTHDC1	92	52.096	Chinchilla_lanigera
ENSORLG00000030544	ythdc1	94	59.259	ENSCPBG00000021965	YTHDC1	92	52.607	Chrysemys_picta_bellii
ENSORLG00000030544	ythdc1	60	66.988	ENSCANG00000004769	YTHDC1	56	61.111	Colobus_angolensis_palliatus
ENSORLG00000030544	ythdc1	60	66.747	ENSCGRG00001000816	Ythdc1	56	61.165	Cricetulus_griseus_chok1gshd
ENSORLG00000030544	ythdc1	60	66.747	ENSCGRG00000009807	Ythdc1	56	61.165	Cricetulus_griseus_crigri
ENSORLG00000030544	ythdc1	95	78.594	ENSCSEG00000020404	ythdc1	94	77.812	Cynoglossus_semilaevis
ENSORLG00000030544	ythdc1	95	77.900	ENSCVAG00000022349	ythdc1	94	77.865	Cyprinodon_variegatus
ENSORLG00000030544	ythdc1	94	62.287	ENSDARG00000051953	ythdc1	92	57.651	Danio_rerio
ENSORLG00000030544	ythdc1	60	66.988	ENSDORG00000013045	Ythdc1	56	61.111	Dipodomys_ordii
ENSORLG00000030544	ythdc1	66	64.557	ENSETEG00000001878	YTHDC1	53	80.392	Echinops_telfairi
ENSORLG00000030544	ythdc1	61	68.856	ENSEASG00005018383	YTHDC1	51	68.478	Equus_asinus_asinus
ENSORLG00000030544	ythdc1	77	68.434	ENSECAG00000018303	YTHDC1	57	68.478	Equus_caballus
ENSORLG00000030544	ythdc1	94	60.417	ENSELUG00000014029	ythdc1	92	57.228	Esox_lucius
ENSORLG00000030544	ythdc1	61	68.856	ENSFCAG00000026791	YTHDC1	56	61.836	Felis_catus
ENSORLG00000030544	ythdc1	76	66.667	ENSFALG00000006581	YTHDC1	81	67.935	Ficedula_albicollis
ENSORLG00000030544	ythdc1	60	66.747	ENSFDAG00000018560	YTHDC1	92	52.711	Fukomys_damarensis
ENSORLG00000030544	ythdc1	80	60.668	ENSFHEG00000001286	ythdc1	65	69.355	Fundulus_heteroclitus
ENSORLG00000030544	ythdc1	54	80.804	ENSGMOG00000018815	ythdc1	63	80.804	Gadus_morhua
ENSORLG00000030544	ythdc1	93	56.781	ENSGALG00000035906	YTHDC1	54	61.893	Gallus_gallus
ENSORLG00000030544	ythdc1	95	65.942	ENSGACG00000015486	ythdc1	94	66.040	Gasterosteus_aculeatus
ENSORLG00000030544	ythdc1	94	58.896	ENSGAGG00000007108	YTHDC1	92	55.607	Gopherus_agassizii
ENSORLG00000030544	ythdc1	60	66.988	ENSGGOG00000021958	YTHDC1	56	61.111	Gorilla_gorilla
ENSORLG00000030544	ythdc1	95	81.406	ENSHBUG00000019288	ythdc1	94	82.629	Haplochromis_burtoni
ENSORLG00000030544	ythdc1	60	66.747	ENSHGLG00000006319	-	92	53.185	Heterocephalus_glaber_female
ENSORLG00000030544	ythdc1	93	54.885	ENSHGLG00100001556	-	92	52.577	Heterocephalus_glaber_male
ENSORLG00000030544	ythdc1	69	75.325	ENSHCOG00000001520	ythdc1	88	80.460	Hippocampus_comes
ENSORLG00000030544	ythdc1	94	63.027	ENSIPUG00000018136	ythdc1	97	59.792	Ictalurus_punctatus
ENSORLG00000030544	ythdc1	60	65.721	ENSSTOG00000013652	YTHDC1	56	59.953	Ictidomys_tridecemlineatus
ENSORLG00000030544	ythdc1	60	66.024	ENSJJAG00000010268	Ythdc1	57	61.650	Jaculus_jaculus
ENSORLG00000030544	ythdc1	61	85.645	ENSKMAG00000006483	ythdc1	86	87.105	Kryptolebias_marmoratus
ENSORLG00000030544	ythdc1	68	91.111	ENSLBEG00000020831	ythdc1	89	91.111	Labrus_bergylta
ENSORLG00000030544	ythdc1	60	65.441	ENSLACG00000004893	YTHDC1	55	65.174	Latimeria_chalumnae
ENSORLG00000030544	ythdc1	94	57.842	ENSLOCG00000003045	ythdc1	92	52.847	Lepisosteus_oculatus
ENSORLG00000030544	ythdc1	94	55.745	ENSLAFG00000021592	YTHDC1	53	73.810	Loxodonta_africana
ENSORLG00000030544	ythdc1	60	66.988	ENSMFAG00000031927	YTHDC1	56	61.111	Macaca_fascicularis
ENSORLG00000030544	ythdc1	60	66.988	ENSMMUG00000002265	YTHDC1	56	61.111	Macaca_mulatta
ENSORLG00000030544	ythdc1	60	66.988	ENSMNEG00000033751	YTHDC1	56	61.111	Macaca_nemestrina
ENSORLG00000030544	ythdc1	60	66.988	ENSMLEG00000042147	YTHDC1	56	61.111	Mandrillus_leucophaeus
ENSORLG00000030544	ythdc1	95	76.553	ENSMAMG00000013122	ythdc1	92	79.567	Mastacembelus_armatus
ENSORLG00000030544	ythdc1	95	81.250	ENSMZEG00005023173	ythdc1	94	82.473	Maylandia_zebra
ENSORLG00000030544	ythdc1	60	66.747	ENSMAUG00000001286	Ythdc1	56	61.165	Mesocricetus_auratus
ENSORLG00000030544	ythdc1	94	54.597	ENSMICG00000034640	YTHDC1	89	52.782	Microcebus_murinus
ENSORLG00000030544	ythdc1	60	66.747	ENSMOCG00000020201	Ythdc1	92	52.232	Microtus_ochrogaster
ENSORLG00000030544	ythdc1	53	49.861	ENSMODG00000004117	-	93	49.853	Monodelphis_domestica
ENSORLG00000030544	ythdc1	94	56.909	ENSMODG00000020754	-	92	51.971	Monodelphis_domestica
ENSORLG00000030544	ythdc1	98	38.398	ENSMODG00000010076	-	50	51.206	Monodelphis_domestica
ENSORLG00000030544	ythdc1	65	46.203	ENSMODG00000009173	-	74	50.938	Monodelphis_domestica
ENSORLG00000030544	ythdc1	99	41.529	ENSMODG00000014337	-	58	60.204	Monodelphis_domestica
ENSORLG00000030544	ythdc1	84	79.371	ENSMALG00000013412	ythdc1	93	79.152	Monopterus_albus
ENSORLG00000030544	ythdc1	60	66.747	MGP_CAROLIEiJ_G0027347	Ythdc1	56	60.870	Mus_caroli
ENSORLG00000030544	ythdc1	62	65.421	ENSMUSG00000035851	Ythdc1	56	60.628	Mus_musculus
ENSORLG00000030544	ythdc1	62	65.654	MGP_PahariEiJ_G0017126	Ythdc1	56	60.870	Mus_pahari
ENSORLG00000030544	ythdc1	62	65.654	MGP_SPRETEiJ_G0028339	Ythdc1	56	60.870	Mus_spretus
ENSORLG00000030544	ythdc1	72	70.455	ENSMPUG00000001743	YTHDC1	57	68.478	Mustela_putorius_furo
ENSORLG00000030544	ythdc1	73	82.439	ENSNBRG00000007663	ythdc1	87	80.907	Neolamprologus_brichardi
ENSORLG00000030544	ythdc1	71	70.625	ENSOPRG00000008986	YTHDC1	56	66.246	Ochotona_princeps
ENSORLG00000030544	ythdc1	60	66.024	ENSODEG00000001715	YTHDC1	92	53.037	Octodon_degus
ENSORLG00000030544	ythdc1	95	93.182	ENSONIG00000012651	ythdc1	89	94.444	Oreochromis_niloticus
ENSORLG00000030544	ythdc1	84	64.444	ENSOCUG00000015886	YTHDC1	65	68.207	Oryctolagus_cuniculus
ENSORLG00000030544	ythdc1	100	99.099	ENSORLG00020019316	ythdc1	100	99.099	Oryzias_latipes_hni
ENSORLG00000030544	ythdc1	100	88.376	ENSOMEG00000000551	ythdc1	95	87.244	Oryzias_melastigma
ENSORLG00000030544	ythdc1	60	66.988	ENSPPAG00000041315	YTHDC1	56	61.111	Pan_paniscus
ENSORLG00000030544	ythdc1	61	67.542	ENSPPRG00000011979	YTHDC1	56	61.836	Panthera_pardus
ENSORLG00000030544	ythdc1	61	67.303	ENSPTIG00000015527	YTHDC1	56	61.594	Panthera_tigris_altaica
ENSORLG00000030544	ythdc1	60	66.988	ENSPTRG00000016105	YTHDC1	56	61.111	Pan_troglodytes
ENSORLG00000030544	ythdc1	60	66.988	ENSPANG00000021590	YTHDC1	56	61.111	Papio_anubis
ENSORLG00000030544	ythdc1	94	59.475	ENSPKIG00000018497	ythdc1	92	56.278	Paramormyrops_kingsleyae
ENSORLG00000030544	ythdc1	93	56.548	ENSPSIG00000002782	YTHDC1	50	67.120	Pelodiscus_sinensis
ENSORLG00000030544	ythdc1	59	71.471	ENSPMGG00000000970	-	76	70.588	Periophthalmus_magnuspinnatus
ENSORLG00000030544	ythdc1	60	66.747	ENSPEMG00000013850	Ythdc1	57	60.870	Peromyscus_maniculatus_bairdii
ENSORLG00000030544	ythdc1	94	56.909	ENSPCIG00000006870	YTHDC1	92	51.971	Phascolarctos_cinereus
ENSORLG00000030544	ythdc1	61	86.946	ENSPFOG00000013404	ythdc1	94	78.922	Poecilia_formosa
ENSORLG00000030544	ythdc1	61	86.946	ENSPLAG00000011079	ythdc1	86	87.438	Poecilia_latipinna
ENSORLG00000030544	ythdc1	61	86.946	ENSPMEG00000009238	ythdc1	94	79.081	Poecilia_mexicana
ENSORLG00000030544	ythdc1	83	73.321	ENSPREG00000016973	ythdc1	90	76.407	Poecilia_reticulata
ENSORLG00000030544	ythdc1	60	65.982	ENSPPYG00000014726	YTHDC1	55	67.663	Pongo_abelii
ENSORLG00000030544	ythdc1	95	81.250	ENSPNYG00000011687	ythdc1	94	82.473	Pundamilia_nyererei
ENSORLG00000030544	ythdc1	94	63.804	ENSPNAG00000028365	ythdc1	92	59.969	Pygocentrus_nattereri
ENSORLG00000030544	ythdc1	60	66.988	ENSRROG00000035028	YTHDC1	56	61.111	Rhinopithecus_roxellana
ENSORLG00000030544	ythdc1	60	66.988	ENSSBOG00000022353	YTHDC1	56	61.111	Saimiri_boliviensis_boliviensis
ENSORLG00000030544	ythdc1	94	56.315	ENSSHAG00000002538	YTHDC1	92	51.825	Sarcophilus_harrisii
ENSORLG00000030544	ythdc1	94	61.633	ENSSFOG00015003298	ythdc1	92	58.154	Scleropages_formosus
ENSORLG00000030544	ythdc1	95	77.656	ENSSMAG00000009086	ythdc1	94	77.656	Scophthalmus_maximus
ENSORLG00000030544	ythdc1	95	80.745	ENSSDUG00000022008	ythdc1	94	82.609	Seriola_dumerili
ENSORLG00000030544	ythdc1	95	80.435	ENSSLDG00000007926	ythdc1	94	82.298	Seriola_lalandi_dorsalis
ENSORLG00000030544	ythdc1	61	68.127	ENSSARG00000010960	YTHDC1	60	67.663	Sorex_araneus
ENSORLG00000030544	ythdc1	94	56.175	ENSSPUG00000009357	YTHDC1	92	53.253	Sphenodon_punctatus
ENSORLG00000030544	ythdc1	95	79.814	ENSSPAG00000011449	ythdc1	94	81.832	Stegastes_partitus
ENSORLG00000030544	ythdc1	61	68.856	ENSSSCG00000035505	YTHDC1	51	67.021	Sus_scrofa
ENSORLG00000030544	ythdc1	93	62.600	ENSTRUG00000010142	ythdc1	86	80.000	Takifugu_rubripes
ENSORLG00000030544	ythdc1	98	68.196	ENSTNIG00000013243	ythdc1	91	68.232	Tetraodon_nigroviridis
ENSORLG00000030544	ythdc1	61	68.856	ENSUAMG00000010388	YTHDC1	60	61.836	Ursus_americanus
ENSORLG00000030544	ythdc1	93	52.833	ENSUMAG00000013668	YTHDC1	50	59.091	Ursus_maritimus
ENSORLG00000030544	ythdc1	94	54.720	ENSVPAG00000009040	YTHDC1	56	61.408	Vicugna_pacos
ENSORLG00000030544	ythdc1	61	68.856	ENSVVUG00000005387	YTHDC1	51	68.478	Vulpes_vulpes
ENSORLG00000030544	ythdc1	94	58.473	ENSXETG00000017960	ythdc1	92	55.743	Xenopus_tropicalis
ENSORLG00000030544	ythdc1	53	73.267	ENSXCOG00000000530	ythdc1	82	71.845	Xiphophorus_couchianus
ENSORLG00000030544	ythdc1	95	78.605	ENSXMAG00000005196	ythdc1	94	79.081	Xiphophorus_maculatus