EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000030578 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3019 bases
Position: chr6:29796284-29799302
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000039873	RVT_1	PF00078.27	4.4e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000042566	-	3019	-	ENSORLP00000039873	949 (aa)	-	-

Gene Model

Click here to download ENSORLG00000030578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000030578	-	51	30.579	ENSORLG00000029299	-	95	30.579
ENSORLG00000030578	-	58	30.922	ENSORLG00000027144	-	93	30.849
ENSORLG00000030578	-	100	99.052	ENSORLG00000030308	-	100	99.052
ENSORLG00000030578	-	85	38.793	ENSORLG00000023374	-	99	38.916
ENSORLG00000030578	-	58	30.686	ENSORLG00000028845	-	93	30.623
ENSORLG00000030578	-	52	30.938	ENSORLG00000029093	-	96	30.938
ENSORLG00000030578	-	53	30.059	ENSORLG00000022572	-	99	30.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030578	-	79	39.096	ENSLACG00000002477	-	87	38.830	Latimeria_chalumnae
ENSORLG00000030578	-	75	35.196	ENSLACG00000007383	-	79	40.125	Latimeria_chalumnae
ENSORLG00000030578	-	80	35.058	ENSLACG00000015903	-	88	35.019	Latimeria_chalumnae
ENSORLG00000030578	-	79	37.134	ENSLACG00000005123	-	92	37.134	Latimeria_chalumnae
ENSORLG00000030578	-	98	45.522	ENSORLG00015002919	-	88	45.629	Oryzias_latipes_hsok
ENSORLG00000030578	-	92	98.506	ENSORLG00015013910	-	99	98.506	Oryzias_latipes_hsok
ENSORLG00000030578	-	98	40.689	ENSPSIG00000001896	-	89	40.169	Pelodiscus_sinensis
ENSORLG00000030578	-	56	47.092	ENSPSIG00000000142	-	99	47.092	Pelodiscus_sinensis
ENSORLG00000030578	-	72	43.106	ENSPSIG00000015886	-	95	43.704	Pelodiscus_sinensis
ENSORLG00000030578	-	63	39.028	ENSPSIG00000000041	-	99	38.693	Pelodiscus_sinensis
ENSORLG00000030578	-	64	39.409	ENSPSIG00000001546	-	100	39.080	Pelodiscus_sinensis
ENSORLG00000030578	-	50	41.737	ENSPSIG00000001353	-	94	41.737	Pelodiscus_sinensis
ENSORLG00000030578	-	50	41.719	ENSPSIG00000001486	-	94	41.719	Pelodiscus_sinensis
ENSORLG00000030578	-	83	40.961	ENSPSIG00000001155	-	86	40.708	Pelodiscus_sinensis
ENSORLG00000030578	-	98	40.689	ENSPSIG00000000630	-	89	40.169	Pelodiscus_sinensis
ENSORLG00000030578	-	50	41.719	ENSPSIG00000001300	-	96	41.841	Pelodiscus_sinensis
ENSORLG00000030578	-	55	45.298	ENSPSIG00000001022	-	80	45.298	Pelodiscus_sinensis
ENSORLG00000030578	-	99	40.486	ENSPSIG00000001183	-	89	40.275	Pelodiscus_sinensis
ENSORLG00000030578	-	50	41.719	ENSPSIG00000000993	-	91	41.719	Pelodiscus_sinensis
ENSORLG00000030578	-	70	40.602	ENSPSIG00000000104	-	85	40.301	Pelodiscus_sinensis
ENSORLG00000030578	-	54	47.674	ENSPSIG00000001632	-	99	46.904	Pelodiscus_sinensis
ENSORLG00000030578	-	61	39.243	ENSPSIG00000000618	-	82	38.898	Pelodiscus_sinensis
ENSORLG00000030578	-	98	40.689	ENSPSIG00000000229	-	89	40.169	Pelodiscus_sinensis
ENSORLG00000030578	-	66	46.361	ENSPSIG00000001059	-	90	46.361	Pelodiscus_sinensis
ENSORLG00000030578	-	50	41.649	ENSPSIG00000001231	-	94	41.649	Pelodiscus_sinensis