EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000030592 (Gene tree)
Gene ID: 101173466
Gene Symbol: pym1
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8103 bases
Position: chr7:22057819-22065921
Accession: 101173466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000033354	Mago-bind	PF09282.10	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000042357	-	5508	XM_004070873	ENSORLP00000033354	207 (aa)	XP_004070921	H2MJW0

Gene Model

Click here to download ENSORLG00000030592's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG
ola03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030592	pym1	94	61.307	ENSG00000170473	PYM1	99	61.722	Homo_sapiens
ENSORLG00000030592	pym1	100	77.251	ENSAPOG00000023045	pym1	100	77.251	Acanthochromis_polyacanthus
ENSORLG00000030592	pym1	91	58.854	ENSAMEG00000003091	PYM1	98	58.537	Ailuropoda_melanoleuca
ENSORLG00000030592	pym1	100	77.570	ENSACIG00000012769	pym1	100	78.505	Amphilophus_citrinellus
ENSORLG00000030592	pym1	100	79.524	ENSAOCG00000021358	pym1	100	79.524	Amphiprion_ocellaris
ENSORLG00000030592	pym1	100	79.524	ENSAPEG00000022679	pym1	100	79.524	Amphiprion_percula
ENSORLG00000030592	pym1	100	74.286	ENSATEG00000024022	pym1	100	78.199	Anabas_testudineus
ENSORLG00000030592	pym1	94	60.976	ENSACAG00000005714	PYM1	99	61.574	Anolis_carolinensis
ENSORLG00000030592	pym1	94	61.307	ENSANAG00000036967	PYM1	99	61.722	Aotus_nancymaae
ENSORLG00000030592	pym1	99	63.721	ENSAMXG00000007650	pym1	99	65.116	Astyanax_mexicanus
ENSORLG00000030592	pym1	94	62.069	ENSBTAG00000031146	PYM1	99	62.441	Bos_taurus
ENSORLG00000030592	pym1	94	61.307	ENSCJAG00000041077	PYM1	99	61.722	Callithrix_jacchus
ENSORLG00000030592	pym1	94	62.562	ENSCAFG00000000076	PYM1	99	62.911	Canis_familiaris
ENSORLG00000030592	pym1	94	62.562	ENSCAFG00020026099	PYM1	99	62.911	Canis_lupus_dingo
ENSORLG00000030592	pym1	94	61.881	ENSCHIG00000026207	PYM1	99	62.264	Capra_hircus
ENSORLG00000030592	pym1	94	59.799	ENSTSYG00000000787	PYM1	99	60.287	Carlito_syrichta
ENSORLG00000030592	pym1	89	59.893	ENSCAPG00000010374	PYM1	99	60.406	Cavia_aperea
ENSORLG00000030592	pym1	94	61.307	ENSCPOG00000031546	PYM1	99	61.722	Cavia_porcellus
ENSORLG00000030592	pym1	94	61.307	ENSCCAG00000026187	PYM1	99	61.722	Cebus_capucinus
ENSORLG00000030592	pym1	94	61.307	ENSCATG00000018801	PYM1	99	61.722	Cercocebus_atys
ENSORLG00000030592	pym1	94	62.376	ENSCLAG00000007964	PYM1	99	62.736	Chinchilla_lanigera
ENSORLG00000030592	pym1	89	60.106	ENSCSAG00000005291	PYM1	97	60.606	Chlorocebus_sabaeus
ENSORLG00000030592	pym1	98	39.252	ENSCING00000006448	-	99	42.056	Ciona_intestinalis
ENSORLG00000030592	pym1	98	43.396	ENSCSAVG00000009805	-	94	42.453	Ciona_savignyi
ENSORLG00000030592	pym1	93	60.204	ENSCANG00000019757	-	85	60.204	Colobus_angolensis_palliatus
ENSORLG00000030592	pym1	94	61.307	ENSCANG00000020338	-	99	61.722	Colobus_angolensis_palliatus
ENSORLG00000030592	pym1	94	57.789	ENSCGRG00001018051	-	99	61.137	Cricetulus_griseus_chok1gshd
ENSORLG00000030592	pym1	91	51.832	ENSCGRG00001004231	-	97	51.456	Cricetulus_griseus_chok1gshd
ENSORLG00000030592	pym1	91	51.832	ENSCGRG00000018933	-	97	51.456	Cricetulus_griseus_crigri
ENSORLG00000030592	pym1	94	57.789	ENSCGRG00000012495	-	99	61.137	Cricetulus_griseus_crigri
ENSORLG00000030592	pym1	94	71.717	ENSCSEG00000021531	pym1	100	74.762	Cynoglossus_semilaevis
ENSORLG00000030592	pym1	99	76.699	ENSCVAG00000017360	pym1	88	76.699	Cyprinodon_variegatus
ENSORLG00000030592	pym1	100	56.164	ENSDARG00000046024	pym1	100	56.164	Danio_rerio
ENSORLG00000030592	pym1	93	60.204	ENSDNOG00000048414	PYM1	91	59.809	Dasypus_novemcinctus
ENSORLG00000030592	pym1	94	61.307	ENSDORG00000029448	Pym1	99	61.722	Dipodomys_ordii
ENSORLG00000030592	pym1	99	30.631	FBgn0034918	Pym	98	30.631	Drosophila_melanogaster
ENSORLG00000030592	pym1	89	57.447	ENSETEG00000004461	-	99	57.576	Echinops_telfairi
ENSORLG00000030592	pym1	88	58.602	ENSEASG00005002271	PYM1	85	59.184	Equus_asinus_asinus
ENSORLG00000030592	pym1	94	61.307	ENSECAG00000011870	PYM1	99	61.722	Equus_caballus
ENSORLG00000030592	pym1	100	64.423	ENSELUG00000024250	pym1	100	65.550	Esox_lucius
ENSORLG00000030592	pym1	94	62.069	ENSFCAG00000013967	PYM1	99	62.441	Felis_catus
ENSORLG00000030592	pym1	94	62.687	ENSFDAG00000006314	PYM1	99	63.033	Fukomys_damarensis
ENSORLG00000030592	pym1	94	78.109	ENSFHEG00000005884	pym1	100	78.873	Fundulus_heteroclitus
ENSORLG00000030592	pym1	94	64.103	ENSGMOG00000007239	pym1	97	65.196	Gadus_morhua
ENSORLG00000030592	pym1	94	63.636	ENSGALG00000046169	PYM1	99	64.115	Gallus_gallus
ENSORLG00000030592	pym1	100	78.140	ENSGAFG00000003280	pym1	100	78.605	Gambusia_affinis
ENSORLG00000030592	pym1	100	69.565	ENSGACG00000010703	pym1	100	69.565	Gasterosteus_aculeatus
ENSORLG00000030592	pym1	92	60.000	ENSGAGG00000001973	PYM1	93	60.648	Gopherus_agassizii
ENSORLG00000030592	pym1	94	60.804	ENSGGOG00000043246	PYM1	99	61.244	Gorilla_gorilla
ENSORLG00000030592	pym1	100	76.777	ENSHBUG00000012719	pym1	100	78.199	Haplochromis_burtoni
ENSORLG00000030592	pym1	93	61.500	ENSHGLG00000017155	PYM1	99	61.033	Heterocephalus_glaber_female
ENSORLG00000030592	pym1	93	61.500	ENSHGLG00100015341	PYM1	99	61.033	Heterocephalus_glaber_male
ENSORLG00000030592	pym1	100	69.484	ENSHCOG00000007987	pym1	86	69.484	Hippocampus_comes
ENSORLG00000030592	pym1	99	65.566	ENSIPUG00000005975	wibga	99	66.981	Ictalurus_punctatus
ENSORLG00000030592	pym1	94	60.804	ENSSTOG00000014206	PYM1	99	61.244	Ictidomys_tridecemlineatus
ENSORLG00000030592	pym1	94	59.184	ENSJJAG00000013338	Pym1	99	59.709	Jaculus_jaculus
ENSORLG00000030592	pym1	100	76.471	ENSKMAG00000006351	pym1	100	77.376	Kryptolebias_marmoratus
ENSORLG00000030592	pym1	100	70.813	ENSLBEG00000015707	pym1	100	74.163	Labrus_bergylta
ENSORLG00000030592	pym1	90	65.816	ENSLACG00000014398	PYM1	94	66.667	Latimeria_chalumnae
ENSORLG00000030592	pym1	94	62.500	ENSLAFG00000002369	PYM1	99	62.201	Loxodonta_africana
ENSORLG00000030592	pym1	94	61.307	ENSMFAG00000003048	PYM1	99	61.722	Macaca_fascicularis
ENSORLG00000030592	pym1	94	61.307	ENSMMUG00000011002	PYM1	99	61.722	Macaca_mulatta
ENSORLG00000030592	pym1	94	61.307	ENSMNEG00000034677	PYM1	99	61.722	Macaca_nemestrina
ENSORLG00000030592	pym1	94	61.307	ENSMLEG00000007971	PYM1	99	61.722	Mandrillus_leucophaeus
ENSORLG00000030592	pym1	100	75.115	ENSMAMG00000001588	pym1	100	76.147	Mastacembelus_armatus
ENSORLG00000030592	pym1	100	76.303	ENSMZEG00005026458	pym1	100	77.725	Maylandia_zebra
ENSORLG00000030592	pym1	94	57.789	ENSMAUG00000007318	Pym1	99	60.664	Mesocricetus_auratus
ENSORLG00000030592	pym1	94	61.307	ENSMICG00000032962	PYM1	99	61.722	Microcebus_murinus
ENSORLG00000030592	pym1	94	57.789	ENSMOCG00000010208	Pym1	99	58.373	Microtus_ochrogaster
ENSORLG00000030592	pym1	100	66.346	ENSMMOG00000009301	pym1	100	69.231	Mola_mola
ENSORLG00000030592	pym1	100	72.170	ENSMALG00000013496	pym1	100	76.415	Monopterus_albus
ENSORLG00000030592	pym1	93	60.204	MGP_CAROLIEiJ_G0015953	Pym1	99	59.809	Mus_caroli
ENSORLG00000030592	pym1	93	60.204	ENSMUSG00000064030	Pym1	99	59.809	Mus_musculus
ENSORLG00000030592	pym1	93	60.513	MGP_PahariEiJ_G0031131	Pym1	99	60.577	Mus_pahari
ENSORLG00000030592	pym1	93	60.204	MGP_SPRETEiJ_G0016778	Pym1	99	59.809	Mus_spretus
ENSORLG00000030592	pym1	94	60.804	ENSMPUG00000000931	PYM1	99	61.244	Mustela_putorius_furo
ENSORLG00000030592	pym1	93	58.974	ENSMLUG00000003586	PYM1	99	58.654	Myotis_lucifugus
ENSORLG00000030592	pym1	90	60.000	ENSNGAG00000019207	Pym1	93	60.500	Nannospalax_galili
ENSORLG00000030592	pym1	100	76.777	ENSNBRG00000006951	pym1	100	78.199	Neolamprologus_brichardi
ENSORLG00000030592	pym1	94	61.307	ENSNLEG00000017588	PYM1	99	61.722	Nomascus_leucogenys
ENSORLG00000030592	pym1	88	58.919	ENSMEUG00000001017	PYM1	99	58.376	Notamacropus_eugenii
ENSORLG00000030592	pym1	92	58.247	ENSOPRG00000007797	PYM1	96	58.824	Ochotona_princeps
ENSORLG00000030592	pym1	94	62.814	ENSODEG00000004289	PYM1	99	63.158	Octodon_degus
ENSORLG00000030592	pym1	100	74.766	ENSONIG00000016740	pym1	100	77.103	Oreochromis_niloticus
ENSORLG00000030592	pym1	89	59.043	ENSOCUG00000025969	PYM1	85	59.596	Oryctolagus_cuniculus
ENSORLG00000030592	pym1	100	97.608	ENSORLG00020011264	pym1	100	97.608	Oryzias_latipes_hni
ENSORLG00000030592	pym1	100	99.034	ENSORLG00015005287	pym1	100	99.034	Oryzias_latipes_hsok
ENSORLG00000030592	pym1	100	86.124	ENSOMEG00000022250	pym1	100	88.372	Oryzias_melastigma
ENSORLG00000030592	pym1	89	60.638	ENSOGAG00000007038	PYM1	93	61.111	Otolemur_garnettii
ENSORLG00000030592	pym1	94	62.376	ENSOARG00000010856	PYM1	99	62.736	Ovis_aries
ENSORLG00000030592	pym1	94	61.307	ENSPPAG00000043630	PYM1	99	61.722	Pan_paniscus
ENSORLG00000030592	pym1	94	62.069	ENSPPRG00000013243	PYM1	99	62.441	Panthera_pardus
ENSORLG00000030592	pym1	94	60.804	ENSPTIG00000017380	PYM1	99	61.244	Panthera_tigris_altaica
ENSORLG00000030592	pym1	94	61.307	ENSPTRG00000005067	PYM1	99	61.722	Pan_troglodytes
ENSORLG00000030592	pym1	94	61.307	ENSPANG00000009562	PYM1	99	61.722	Papio_anubis
ENSORLG00000030592	pym1	99	68.900	ENSPKIG00000006301	pym1	99	68.900	Paramormyrops_kingsleyae
ENSORLG00000030592	pym1	94	58.621	ENSPSIG00000003043	PYM1	99	59.070	Pelodiscus_sinensis
ENSORLG00000030592	pym1	99	68.900	ENSPMGG00000023161	pym1	99	68.900	Periophthalmus_magnuspinnatus
ENSORLG00000030592	pym1	94	59.296	ENSPEMG00000009372	Pym1	99	60.577	Peromyscus_maniculatus_bairdii
ENSORLG00000030592	pym1	88	57.838	ENSPCIG00000024658	PYM1	92	56.931	Phascolarctos_cinereus
ENSORLG00000030592	pym1	100	80.095	ENSPFOG00000008193	pym1	100	80.282	Poecilia_formosa
ENSORLG00000030592	pym1	100	79.812	ENSPLAG00000009228	pym1	100	80.282	Poecilia_latipinna
ENSORLG00000030592	pym1	100	79.812	ENSPMEG00000001505	pym1	100	80.282	Poecilia_mexicana
ENSORLG00000030592	pym1	90	58.947	ENSPPYG00000004635	PYM1	97	59.596	Pongo_abelii
ENSORLG00000030592	pym1	94	61.084	ENSPCOG00000019706	PYM1	99	61.502	Propithecus_coquereli
ENSORLG00000030592	pym1	90	60.847	ENSPVAG00000011437	PYM1	97	61.307	Pteropus_vampyrus
ENSORLG00000030592	pym1	94	77.778	ENSPNYG00000012871	pym1	100	78.095	Pundamilia_nyererei
ENSORLG00000030592	pym1	99	65.741	ENSPNAG00000018833	pym1	99	65.741	Pygocentrus_nattereri
ENSORLG00000030592	pym1	79	53.801	ENSRNOG00000049415	AABR07055413.1	99	45.498	Rattus_norvegicus
ENSORLG00000030592	pym1	92	54.902	ENSRNOG00000058130	Pym1	97	59.420	Rattus_norvegicus
ENSORLG00000030592	pym1	94	57.286	ENSRBIG00000033362	PYM1	99	57.895	Rhinopithecus_bieti
ENSORLG00000030592	pym1	94	61.307	ENSRROG00000043620	PYM1	99	61.722	Rhinopithecus_roxellana
ENSORLG00000030592	pym1	94	61.307	ENSSBOG00000029393	PYM1	99	61.722	Saimiri_boliviensis_boliviensis
ENSORLG00000030592	pym1	93	59.500	ENSSHAG00000008280	PYM1	99	59.155	Sarcophilus_harrisii
ENSORLG00000030592	pym1	93	64.467	ENSSFOG00015021475	pym1	100	65.094	Scleropages_formosus
ENSORLG00000030592	pym1	100	76.777	ENSSMAG00000020912	pym1	100	77.251	Scophthalmus_maximus
ENSORLG00000030592	pym1	100	74.766	ENSSDUG00000001807	pym1	100	76.744	Seriola_dumerili
ENSORLG00000030592	pym1	100	74.519	ENSSLDG00000013730	pym1	100	77.512	Seriola_lalandi_dorsalis
ENSORLG00000030592	pym1	89	57.513	ENSSARG00000009569	PYM1	99	59.799	Sorex_araneus
ENSORLG00000030592	pym1	89	59.474	ENSSPUG00000015059	PYM1	97	59.314	Sphenodon_punctatus
ENSORLG00000030592	pym1	100	78.505	ENSSPAG00000020100	pym1	100	78.505	Stegastes_partitus
ENSORLG00000030592	pym1	94	61.386	ENSSSCG00000040825	PYM1	99	61.792	Sus_scrofa
ENSORLG00000030592	pym1	99	72.115	ENSTRUG00000021367	pym1	100	72.115	Takifugu_rubripes
ENSORLG00000030592	pym1	100	66.359	ENSTNIG00000012534	pym1	100	68.203	Tetraodon_nigroviridis
ENSORLG00000030592	pym1	88	57.297	ENSTBEG00000004208	PYM1	98	56.853	Tupaia_belangeri
ENSORLG00000030592	pym1	90	61.376	ENSTTRG00000014971	PYM1	97	62.562	Tursiops_truncatus
ENSORLG00000030592	pym1	94	59.296	ENSUAMG00000014521	PYM1	99	59.809	Ursus_americanus
ENSORLG00000030592	pym1	91	56.250	ENSUMAG00000016241	PYM1	89	56.098	Ursus_maritimus
ENSORLG00000030592	pym1	94	62.069	ENSVVUG00000022749	PYM1	99	61.972	Vulpes_vulpes
ENSORLG00000030592	pym1	94	63.452	ENSXETG00000021850	pym1	99	64.593	Xenopus_tropicalis
ENSORLG00000030592	pym1	100	78.873	ENSXMAG00000011649	pym1	100	79.343	Xiphophorus_maculatus