EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000030642 (Gene tree)
Gene ID: 101162878
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 8612 bases
Position: chr21:8613559-8622170
Accession: 101162878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000031552	MMR_HSR1	PF01926.23	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000034370	-	2865	XM_004081461	ENSORLP00000031552	233 (aa)	XP_004081509	H2M7K9

Gene Model

Click here to download ENSORLG00000030642's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000030642	zgc:101559	67	34.177	ENSORLG00000017806	rab9a	78	34.177
ENSORLG00000030642	zgc:101559	64	33.987	ENSORLG00000027892	RAB29	75	33.987
ENSORLG00000030642	zgc:101559	63	41.497	ENSORLG00000004624	rab18a	93	36.410
ENSORLG00000030642	zgc:101559	65	37.179	ENSORLG00000006405	rab9b	73	37.179
ENSORLG00000030642	zgc:101559	70	39.412	ENSORLG00000029090	-	79	39.412
ENSORLG00000030642	zgc:101559	80	36.702	ENSORLG00000003119	rab34b	67	36.702
ENSORLG00000030642	zgc:101559	90	39.713	ENSORLG00000028885	rab35b	99	39.713
ENSORLG00000030642	zgc:101559	78	44.751	ENSORLG00000028104	rab1ab	84	44.751
ENSORLG00000030642	zgc:101559	80	39.791	ENSORLG00000003902	rab12	77	39.791
ENSORLG00000030642	zgc:101559	72	40.120	ENSORLG00000007406	rab14	75	40.120
ENSORLG00000030642	zgc:101559	69	33.540	ENSORLG00000018119	si:ch73-116o1.2	92	31.472
ENSORLG00000030642	zgc:101559	82	36.598	ENSORLG00000004394	rab34a	71	36.598
ENSORLG00000030642	zgc:101559	69	37.888	ENSORLG00000016555	rab3db	73	38.961
ENSORLG00000030642	zgc:101559	85	36.634	ENSORLG00000012158	rab25a	95	36.634
ENSORLG00000030642	zgc:101559	89	42.995	ENSORLG00000000602	zgc:171927	89	42.995
ENSORLG00000030642	zgc:101559	69	37.870	ENSORLG00000000937	-	77	37.870
ENSORLG00000030642	zgc:101559	73	40.936	ENSORLG00000012261	rab5aa	77	40.936
ENSORLG00000030642	zgc:101559	69	42.857	ENSORLG00000025395	-	77	42.857
ENSORLG00000030642	zgc:101559	71	36.047	ENSORLG00000026940	rasl11a	67	36.047
ENSORLG00000030642	zgc:101559	67	45.912	ENSORLG00000001850	RAB39B	74	45.912
ENSORLG00000030642	zgc:101559	70	37.576	ENSORLG00000010115	rab23	71	39.865
ENSORLG00000030642	zgc:101559	76	36.364	ENSORLG00000018912	hrasb	96	36.702
ENSORLG00000030642	zgc:101559	52	32.061	ENSORLG00000020457	rabl3	55	32.061
ENSORLG00000030642	zgc:101559	79	38.298	ENSORLG00000016135	rab25b	93	37.838
ENSORLG00000030642	zgc:101559	70	39.645	ENSORLG00000001351	-	79	39.645
ENSORLG00000030642	zgc:101559	74	33.140	ENSORLG00000024443	zgc:55558	96	33.696
ENSORLG00000030642	zgc:101559	66	40.909	ENSORLG00000022335	rab42a	70	40.909
ENSORLG00000030642	zgc:101559	50	35.897	ENSORLG00000009874	rabl2	50	35.897
ENSORLG00000030642	zgc:101559	74	39.884	ENSORLG00000013938	rab11bb	78	39.884
ENSORLG00000030642	zgc:101559	74	38.728	ENSORLG00000015307	rab11ba	78	38.728
ENSORLG00000030642	zgc:101559	86	41.791	ENSORLG00000021846	-	92	41.791
ENSORLG00000030642	zgc:101559	84	40.816	ENSORLG00000001098	si:dkey-16l2.16	88	40.816
ENSORLG00000030642	zgc:101559	83	35.897	ENSORLG00000024558	-	79	36.269
ENSORLG00000030642	zgc:101559	85	36.098	ENSORLG00000025098	si:dkey-13a21.4	96	36.098
ENSORLG00000030642	zgc:101559	72	40.719	ENSORLG00000029921	-	75	40.719
ENSORLG00000030642	zgc:101559	64	42.953	ENSORLG00000027669	RAB41	70	42.953
ENSORLG00000030642	zgc:101559	84	47.685	ENSORLG00000002071	-	90	47.465
ENSORLG00000030642	zgc:101559	74	37.572	ENSORLG00000016126	rab11al	79	37.572
ENSORLG00000030642	zgc:101559	69	41.358	ENSORLG00000026197	rab6a	76	41.358
ENSORLG00000030642	zgc:101559	72	35.928	ENSORLG00000024102	kras	93	35.870
ENSORLG00000030642	zgc:101559	67	41.667	ENSORLG00000013432	rab2a	73	41.667
ENSORLG00000030642	zgc:101559	63	41.892	ENSORLG00000014099	si:dkey-34d22.5	67	41.892
ENSORLG00000030642	zgc:101559	63	39.189	ENSORLG00000025819	-	79	39.189
ENSORLG00000030642	zgc:101559	65	35.897	ENSORLG00000006628	-	73	35.897
ENSORLG00000030642	zgc:101559	63	40.136	ENSORLG00000009609	rab18b	71	40.136
ENSORLG00000030642	zgc:101559	84	37.563	ENSORLG00000010846	rab15	90	37.563
ENSORLG00000030642	zgc:101559	80	37.634	ENSORLG00000016290	rab6bb	87	37.634
ENSORLG00000030642	zgc:101559	66	45.161	ENSORLG00000008345	-	72	45.161
ENSORLG00000030642	zgc:101559	63	40.816	ENSORLG00000024116	RAB15	70	40.816
ENSORLG00000030642	zgc:101559	63	36.486	ENSORLG00000001566	rhebl1	79	36.486
ENSORLG00000030642	zgc:101559	63	32.667	ENSORLG00000001134	dnajc27	55	32.667
ENSORLG00000030642	zgc:101559	63	37.162	ENSORLG00000003681	rheb	79	37.162
ENSORLG00000030642	zgc:101559	99	57.082	ENSORLG00000030566	rab33a	84	57.082
ENSORLG00000030642	zgc:101559	72	49.102	ENSORLG00000029812	rab30	80	49.102
ENSORLG00000030642	zgc:101559	73	39.181	ENSORLG00000003882	rab5c	76	39.181
ENSORLG00000030642	zgc:101559	74	39.306	ENSORLG00000015284	-	57	39.306
ENSORLG00000030642	zgc:101559	80	64.433	ENSORLG00000030109	rab33ba	83	64.433
ENSORLG00000030642	zgc:101559	77	38.333	ENSORLG00000018331	RAB11A	83	38.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030642	zgc:101559	100	82.906	ENSAPOG00000007503	zgc:101559	100	82.906	Acanthochromis_polyacanthus
ENSORLG00000030642	zgc:101559	87	87.192	ENSACIG00000021459	zgc:101559	89	87.192	Amphilophus_citrinellus
ENSORLG00000030642	zgc:101559	100	82.479	ENSAOCG00000024675	zgc:101559	100	82.479	Amphiprion_ocellaris
ENSORLG00000030642	zgc:101559	100	82.479	ENSAPEG00000005176	zgc:101559	100	82.479	Amphiprion_percula
ENSORLG00000030642	zgc:101559	100	80.769	ENSATEG00000007761	zgc:101559	100	80.769	Anabas_testudineus
ENSORLG00000030642	zgc:101559	97	84.211	ENSACLG00000027006	zgc:101559	97	84.211	Astatotilapia_calliptera
ENSORLG00000030642	zgc:101559	100	73.932	ENSAMXG00000040460	zgc:101559	94	73.932	Astyanax_mexicanus
ENSORLG00000030642	zgc:101559	100	79.487	ENSCSEG00000006243	zgc:101559	100	79.487	Cynoglossus_semilaevis
ENSORLG00000030642	zgc:101559	100	83.761	ENSCVAG00000019227	zgc:101559	100	83.761	Cyprinodon_variegatus
ENSORLG00000030642	zgc:101559	100	71.795	ENSDARG00000003257	zgc:101559	100	71.795	Danio_rerio
ENSORLG00000030642	zgc:101559	100	82.479	ENSFHEG00000011483	zgc:101559	100	82.479	Fundulus_heteroclitus
ENSORLG00000030642	zgc:101559	91	78.302	ENSGMOG00000011665	zgc:101559	99	78.302	Gadus_morhua
ENSORLG00000030642	zgc:101559	100	82.051	ENSGAFG00000021202	zgc:101559	100	82.051	Gambusia_affinis
ENSORLG00000030642	zgc:101559	91	80.189	ENSGACG00000001725	zgc:101559	91	80.189	Gasterosteus_aculeatus
ENSORLG00000030642	zgc:101559	100	83.333	ENSHBUG00000007827	zgc:101559	100	83.333	Haplochromis_burtoni
ENSORLG00000030642	zgc:101559	100	75.000	ENSHCOG00000009133	zgc:101559	100	76.050	Hippocampus_comes
ENSORLG00000030642	zgc:101559	86	75.124	ENSIPUG00000022394	zgc:101559	87	75.124	Ictalurus_punctatus
ENSORLG00000030642	zgc:101559	100	78.298	ENSKMAG00000002862	zgc:101559	100	78.298	Kryptolebias_marmoratus
ENSORLG00000030642	zgc:101559	100	83.761	ENSLBEG00000025798	zgc:101559	100	83.761	Labrus_bergylta
ENSORLG00000030642	zgc:101559	88	66.829	ENSLACG00000011557	zgc:101559	89	66.829	Latimeria_chalumnae
ENSORLG00000030642	zgc:101559	100	68.240	ENSLOCG00000005904	zgc:101559	99	68.240	Lepisosteus_oculatus
ENSORLG00000030642	zgc:101559	100	81.197	ENSMAMG00000017431	zgc:101559	100	81.197	Mastacembelus_armatus
ENSORLG00000030642	zgc:101559	100	83.333	ENSMZEG00005021778	zgc:101559	100	83.333	Maylandia_zebra
ENSORLG00000030642	zgc:101559	100	78.632	ENSMMOG00000019779	zgc:101559	100	78.632	Mola_mola
ENSORLG00000030642	zgc:101559	100	79.487	ENSMALG00000003712	zgc:101559	100	79.487	Monopterus_albus
ENSORLG00000030642	zgc:101559	100	82.906	ENSNBRG00000002684	zgc:101559	100	82.906	Neolamprologus_brichardi
ENSORLG00000030642	zgc:101559	100	83.333	ENSONIG00000006715	-	100	83.333	Oreochromis_niloticus
ENSORLG00000030642	zgc:101559	100	99.142	ENSORLG00020012685	zgc:101559	100	99.142	Oryzias_latipes_hni
ENSORLG00000030642	zgc:101559	100	99.571	ENSORLG00015016047	zgc:101559	100	99.571	Oryzias_latipes_hsok
ENSORLG00000030642	zgc:101559	100	93.991	ENSOMEG00000013128	zgc:101559	100	93.991	Oryzias_melastigma
ENSORLG00000030642	zgc:101559	85	76.000	ENSPKIG00000013397	zgc:101559	84	76.000	Paramormyrops_kingsleyae
ENSORLG00000030642	zgc:101559	100	83.333	ENSPFOG00000009101	-	100	83.333	Poecilia_formosa
ENSORLG00000030642	zgc:101559	100	83.333	ENSPLAG00000020627	zgc:101559	100	83.333	Poecilia_latipinna
ENSORLG00000030642	zgc:101559	100	83.333	ENSPMEG00000010152	zgc:101559	100	83.333	Poecilia_mexicana
ENSORLG00000030642	zgc:101559	100	82.906	ENSPREG00000007017	zgc:101559	100	82.906	Poecilia_reticulata
ENSORLG00000030642	zgc:101559	100	83.333	ENSPNYG00000012922	zgc:101559	100	83.333	Pundamilia_nyererei
ENSORLG00000030642	zgc:101559	100	72.650	ENSPNAG00000017856	zgc:101559	100	72.650	Pygocentrus_nattereri
ENSORLG00000030642	zgc:101559	100	69.362	ENSSFOG00015006175	zgc:101559	100	69.362	Scleropages_formosus
ENSORLG00000030642	zgc:101559	99	79.310	ENSSMAG00000002229	zgc:101559	98	79.310	Scophthalmus_maximus
ENSORLG00000030642	zgc:101559	100	84.615	ENSSDUG00000008151	zgc:101559	100	84.615	Seriola_dumerili
ENSORLG00000030642	zgc:101559	100	84.188	ENSSLDG00000019214	zgc:101559	100	84.188	Seriola_lalandi_dorsalis
ENSORLG00000030642	zgc:101559	100	82.906	ENSSPAG00000006404	zgc:101559	100	82.906	Stegastes_partitus
ENSORLG00000030642	zgc:101559	100	79.060	ENSTRUG00000009903	zgc:101559	100	79.060	Takifugu_rubripes
ENSORLG00000030642	zgc:101559	93	78.899	ENSTNIG00000015000	zgc:101559	100	74.576	Tetraodon_nigroviridis
ENSORLG00000030642	zgc:101559	100	83.333	ENSXCOG00000018683	zgc:101559	100	83.333	Xiphophorus_couchianus
ENSORLG00000030642	zgc:101559	100	84.188	ENSXMAG00000011171	zgc:101559	100	84.188	Xiphophorus_maculatus