EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000030645 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-385f13.3
Alias: -
Full Name: si:ch1073-385f13.3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 23252 bases
Position: chr6:8669503-8692754
Accession: ZDB-GENE-131127-357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000045148	RNase_T	PF00929.24	3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040503	-	978	-	ENSORLP00000045148	221 (aa)	-	-

Gene Model

Click here to download ENSORLG00000030645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000030645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000030645	si:ch1073-385f13.3	86	41.451	ENSORLG00000023958	si:ch1073-296i8.2	87	41.451

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000030645	si:ch1073-385f13.3	86	36.123	ENSAOCG00000011593	si:ch1073-296i8.2	81	36.123	Amphiprion_ocellaris
ENSORLG00000030645	si:ch1073-385f13.3	86	35.965	ENSAPEG00000012492	si:ch1073-296i8.2	81	35.965	Amphiprion_percula
ENSORLG00000030645	si:ch1073-385f13.3	83	43.548	ENSATEG00000021547	si:ch1073-296i8.2	72	43.548	Anabas_testudineus
ENSORLG00000030645	si:ch1073-385f13.3	88	68.041	ENSATEG00000021542	si:ch1073-385f13.3	99	68.041	Anabas_testudineus
ENSORLG00000030645	si:ch1073-385f13.3	81	63.333	ENSACLG00000023991	-	55	63.333	Astatotilapia_calliptera
ENSORLG00000030645	si:ch1073-385f13.3	87	65.803	ENSCVAG00000001533	-	98	65.803	Cyprinodon_variegatus
ENSORLG00000030645	si:ch1073-385f13.3	81	48.634	ENSDARG00000092584	si:ch1073-385f13.3	75	48.634	Danio_rerio
ENSORLG00000030645	si:ch1073-385f13.3	83	46.486	ENSDARG00000093773	si:ch1073-296i8.2	78	46.486	Danio_rerio
ENSORLG00000030645	si:ch1073-385f13.3	89	71.429	ENSFHEG00000018181	-	99	71.429	Fundulus_heteroclitus
ENSORLG00000030645	si:ch1073-385f13.3	83	45.161	ENSFHEG00000018188	si:ch1073-296i8.2	74	45.161	Fundulus_heteroclitus
ENSORLG00000030645	si:ch1073-385f13.3	83	53.804	ENSGMOG00000019565	-	97	53.804	Gadus_morhua
ENSORLG00000030645	si:ch1073-385f13.3	79	44.318	ENSGMOG00000019335	si:ch1073-296i8.2	98	44.318	Gadus_morhua
ENSORLG00000030645	si:ch1073-385f13.3	80	44.944	ENSGACG00000007185	si:ch1073-296i8.2	98	44.944	Gasterosteus_aculeatus
ENSORLG00000030645	si:ch1073-385f13.3	89	69.898	ENSHBUG00000007541	si:ch1073-385f13.3	100	69.898	Haplochromis_burtoni
ENSORLG00000030645	si:ch1073-385f13.3	86	43.979	ENSHCOG00000008574	si:ch1073-296i8.2	80	43.979	Hippocampus_comes
ENSORLG00000030645	si:ch1073-385f13.3	83	44.624	ENSKMAG00000015660	si:ch1073-296i8.2	83	44.624	Kryptolebias_marmoratus
ENSORLG00000030645	si:ch1073-385f13.3	86	69.110	ENSKMAG00000015669	-	97	69.110	Kryptolebias_marmoratus
ENSORLG00000030645	si:ch1073-385f13.3	78	48.295	ENSLBEG00000019623	si:ch1073-296i8.2	69	48.295	Labrus_bergylta
ENSORLG00000030645	si:ch1073-385f13.3	86	50.777	ENSLOCG00000014933	-	96	50.777	Lepisosteus_oculatus
ENSORLG00000030645	si:ch1073-385f13.3	84	63.441	ENSMAMG00000023075	si:ch1073-385f13.3	96	63.441	Mastacembelus_armatus
ENSORLG00000030645	si:ch1073-385f13.3	64	41.958	ENSMMOG00000018979	si:ch1073-296i8.2	67	41.958	Mola_mola
ENSORLG00000030645	si:ch1073-385f13.3	86	64.211	ENSMALG00000015952	si:ch1073-385f13.3	97	64.211	Monopterus_albus
ENSORLG00000030645	si:ch1073-385f13.3	89	67.347	ENSONIG00000012794	si:ch1073-385f13.3	100	67.347	Oreochromis_niloticus
ENSORLG00000030645	si:ch1073-385f13.3	89	95.918	ENSORLG00020021903	-	100	95.918	Oryzias_latipes_hni
ENSORLG00000030645	si:ch1073-385f13.3	83	42.473	ENSORLG00020021912	si:ch1073-296i8.2	84	42.473	Oryzias_latipes_hni
ENSORLG00000030645	si:ch1073-385f13.3	86	41.451	ENSORLG00015015303	si:ch1073-296i8.2	87	41.451	Oryzias_latipes_hsok
ENSORLG00000030645	si:ch1073-385f13.3	86	48.705	ENSPKIG00000023552	-	89	48.705	Paramormyrops_kingsleyae
ENSORLG00000030645	si:ch1073-385f13.3	84	61.828	ENSPFOG00000021742	-	98	61.828	Poecilia_formosa
ENSORLG00000030645	si:ch1073-385f13.3	88	63.402	ENSPFOG00000005521	si:ch1073-385f13.3	99	63.402	Poecilia_formosa
ENSORLG00000030645	si:ch1073-385f13.3	85	62.567	ENSPMEG00000013087	si:ch1073-385f13.3	97	62.567	Poecilia_mexicana
ENSORLG00000030645	si:ch1073-385f13.3	88	62.887	ENSPMEG00000013096	si:ch1073-385f13.3	98	62.887	Poecilia_mexicana
ENSORLG00000030645	si:ch1073-385f13.3	86	53.394	ENSPREG00000013537	-	84	53.394	Poecilia_reticulata
ENSORLG00000030645	si:ch1073-385f13.3	83	49.180	ENSPNAG00000018956	si:ch1073-385f13.3	97	49.180	Pygocentrus_nattereri
ENSORLG00000030645	si:ch1073-385f13.3	83	43.548	ENSSMAG00000004874	si:ch1073-296i8.2	71	43.548	Scophthalmus_maximus
ENSORLG00000030645	si:ch1073-385f13.3	88	70.256	ENSSLDG00000002379	si:ch1073-385f13.3	99	70.256	Seriola_lalandi_dorsalis
ENSORLG00000030645	si:ch1073-385f13.3	83	43.548	ENSSPAG00000012797	si:ch1073-296i8.2	94	43.548	Stegastes_partitus
ENSORLG00000030645	si:ch1073-385f13.3	79	45.455	ENSTNIG00000010399	si:ch1073-296i8.2	76	45.455	Tetraodon_nigroviridis
ENSORLG00000030645	si:ch1073-385f13.3	88	62.371	ENSXMAG00000021869	si:ch1073-385f13.3	98	62.371	Xiphophorus_maculatus