EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015000018 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Minus strand
Length
15164 bases
Position
chr20:13521867-13537030
Accession
101157012
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015000878RRM_1PF00076.222.5e-1711
ENSORLP00015022224RRM_1PF00076.224e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015013585-5335-ENSORLP00015000878232 (aa)XP_023805845UPI000CE1FA0A
ENSORLT00015013576-5037-ENSORLP00015022224292 (aa)--
Gene Model
Click here to download ENSORLG00015000018's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015000018's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015000018pabpn18257.286ENSORLG00015000397PABPN1L7949.778
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015000018pabpn18184.737ENSG00000258643BCL2L2-PABPN15784.737Homo_sapiens
ENSORLG00015000018pabpn18683.010ENSG00000100836PABPN19482.738Homo_sapiens
ENSORLG00015000018pabpn110098.276ENSAPOG00000016425pabpn110098.276Acanthochromis_polyacanthus
ENSORLG00015000018pabpn18184.737ENSAMEG00000007048BCL2L2-PABPN110084.737Ailuropoda_melanoleuca
ENSORLG00015000018pabpn110093.878ENSACIG00000021744pabpn110099.432Amphilophus_citrinellus
ENSORLG00015000018pabpn110098.276ENSAOCG00000015805pabpn110098.276Amphiprion_ocellaris
ENSORLG00015000018pabpn110098.276ENSAPEG00000009623pabpn110098.276Amphiprion_percula
ENSORLG00015000018pabpn110098.707ENSATEG00000020531pabpn110098.707Anabas_testudineus
ENSORLG00015000018pabpn18185.789ENSACAG00000006185-7480.476Anolis_carolinensis
ENSORLG00015000018pabpn18484.343ENSANAG00000024513-8476.151Aotus_nancymaae
ENSORLG00015000018pabpn110093.559ENSACLG00000016374pabpn110093.559Astatotilapia_calliptera
ENSORLG00015000018pabpn110097.854ENSAMXG00000000452pabpn110097.854Astyanax_mexicanus
ENSORLG00015000018pabpn18477.041ENSBTAG00000050594-7483.333Bos_taurus
ENSORLG00015000018pabpn18183.333ENSBTAG00000053753-7183.333Bos_taurus
ENSORLG00015000018pabpn18484.343ENSBTAG00000006884PABPN16882.297Bos_taurus
ENSORLG00015000018pabpn16258.904WBGene00003904pabp-28453.977Caenorhabditis_elegans
ENSORLG00015000018pabpn17180.952ENSCJAG00000004407-8480.952Callithrix_jacchus
ENSORLG00015000018pabpn19976.395ENSCJAG00000007960-8476.824Callithrix_jacchus
ENSORLG00015000018pabpn18683.010ENSCAFG00000011482PABPN18671.103Canis_familiaris
ENSORLG00015000018pabpn18683.010ENSCAFG00020006651-6882.775Canis_lupus_dingo
ENSORLG00015000018pabpn18683.010ENSCAFG00020007298-6882.775Canis_lupus_dingo
ENSORLG00015000018pabpn18683.010ENSCHIG00000012184PABPN16882.775Capra_hircus
ENSORLG00015000018pabpn18184.737ENSTSYG00000033996BCL2L2-PABPN19482.738Carlito_syrichta
ENSORLG00015000018pabpn15982.734ENSCAPG00000009461-9285.271Cavia_aperea
ENSORLG00015000018pabpn18682.524ENSCPOG00000025574PABPN16882.297Cavia_porcellus
ENSORLG00015000018pabpn19976.395ENSCCAG00000033954BCL2L2-PABPN18476.824Cebus_capucinus
ENSORLG00015000018pabpn19976.395ENSCATG00000038536BCL2L2-PABPN18476.824Cercocebus_atys
ENSORLG00015000018pabpn16582.781ENSCLAG00000012423PABPN15682.781Chinchilla_lanigera
ENSORLG00015000018pabpn18681.553ENSCSAG00000016036PABPN16881.340Chlorocebus_sabaeus
ENSORLG00015000018pabpn18973.333ENSCHOG00000004798BCL2L2-PABPN18873.333Choloepus_hoffmanni
ENSORLG00015000018pabpn17184.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSORLG00015000018pabpn19064.929ENSCING00000012468-8961.611Ciona_intestinalis
ENSORLG00015000018pabpn17666.854ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSORLG00015000018pabpn18571.717ENSCANG00000030980-8764.286Colobus_angolensis_palliatus
ENSORLG00015000018pabpn18184.737ENSCANG00000009750BCL2L2-PABPN19482.738Colobus_angolensis_palliatus
ENSORLG00015000018pabpn18682.524ENSCGRG00001019696Pabpn19482.143Cricetulus_griseus_chok1gshd
ENSORLG00015000018pabpn16391.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSORLG00015000018pabpn110096.983ENSCSEG00000008774pabpn110096.983Cynoglossus_semilaevis
ENSORLG00015000018pabpn110093.878ENSCVAG00000003152pabpn110094.898Cyprinodon_variegatus
ENSORLG00015000018pabpn110096.983ENSDARG00000045373pabpn110096.983Danio_rerio
ENSORLG00015000018pabpn18153.476ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSORLG00015000018pabpn18683.010ENSDNOG00000023682PABPN16882.775Dasypus_novemcinctus
ENSORLG00015000018pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSORLG00015000018pabpn18682.039ENSDORG00000028966-6881.818Dipodomys_ordii
ENSORLG00015000018pabpn19758.621FBgn0005648Pabp29260.287Drosophila_melanogaster
ENSORLG00015000018pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSORLG00015000018pabpn18683.010ENSEASG00005011716PABPN16882.775Equus_asinus_asinus
ENSORLG00015000018pabpn18582.353ENSECAG00000011652PABPN16384.492Equus_caballus
ENSORLG00015000018pabpn18680.583ENSEEUG00000012973-7176.555Erinaceus_europaeus
ENSORLG00015000018pabpn110094.515ENSELUG00000022654pabpn110094.515Esox_lucius
ENSORLG00015000018pabpn18683.010ENSFCAG00000031922PABPN16882.775Felis_catus
ENSORLG00015000018pabpn17182.738ENSFDAG00000018381BCL2L2-PABPN19482.738Fukomys_damarensis
ENSORLG00015000018pabpn110096.121ENSFHEG00000007215pabpn110096.121Fundulus_heteroclitus
ENSORLG00015000018pabpn110089.078ENSGMOG00000003922pabpn110091.468Gadus_morhua
ENSORLG00015000018pabpn18382.828ENSGALG00000052930-6182.938Gallus_gallus
ENSORLG00015000018pabpn110098.291ENSGAFG00000017099pabpn110098.291Gambusia_affinis
ENSORLG00015000018pabpn110093.836ENSGACG00000002167pabpn110093.836Gasterosteus_aculeatus
ENSORLG00015000018pabpn18771.635ENSGGOG00000025919-9869.799Gorilla_gorilla
ENSORLG00015000018pabpn19976.395ENSGGOG00000022683-8476.824Gorilla_gorilla
ENSORLG00015000018pabpn18970.192ENSGGOG00000039675-9165.833Gorilla_gorilla
ENSORLG00015000018pabpn110098.707ENSHBUG00000019523pabpn110098.707Haplochromis_burtoni
ENSORLG00015000018pabpn18770.048ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSORLG00015000018pabpn17163.473ENSHGLG00000009842-9363.473Heterocephalus_glaber_female
ENSORLG00015000018pabpn18682.524ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSORLG00015000018pabpn17170.060ENSHGLG00100018935-9473.256Heterocephalus_glaber_male
ENSORLG00015000018pabpn18770.048ENSHGLG00100015565-8765.066Heterocephalus_glaber_male
ENSORLG00015000018pabpn17584.270ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSORLG00015000018pabpn110097.414ENSHCOG00000004655pabpn110097.414Hippocampus_comes
ENSORLG00015000018pabpn110096.552ENSIPUG00000008085PABPN110096.552Ictalurus_punctatus
ENSORLG00015000018pabpn110088.793ENSIPUG00000000180-9988.793Ictalurus_punctatus
ENSORLG00015000018pabpn17182.738ENSSTOG00000029847BCL2L2-PABPN19482.738Ictidomys_tridecemlineatus
ENSORLG00015000018pabpn17182.738ENSJJAG00000023507Gm205219482.738Jaculus_jaculus
ENSORLG00015000018pabpn110098.283ENSKMAG00000018748pabpn110098.283Kryptolebias_marmoratus
ENSORLG00015000018pabpn110098.707ENSLBEG00000027266pabpn110098.707Labrus_bergylta
ENSORLG00015000018pabpn17588.202ENSLACG00000000646pabpn19177.725Latimeria_chalumnae
ENSORLG00015000018pabpn19066.355ENSLOCG00000004694pabpn1l9966.355Lepisosteus_oculatus
ENSORLG00015000018pabpn110088.737ENSLOCG00000000796pabpn110089.078Lepisosteus_oculatus
ENSORLG00015000018pabpn16583.444ENSLAFG00000031227-9983.444Loxodonta_africana
ENSORLG00015000018pabpn18184.737ENSMFAG00000032183BCL2L2-PABPN19482.738Macaca_fascicularis
ENSORLG00015000018pabpn16175.352ENSMFAG00000031355-9975.352Macaca_fascicularis
ENSORLG00015000018pabpn18184.737ENSMMUG00000014747BCL2L2-PABPN110082.993Macaca_mulatta
ENSORLG00015000018pabpn18668.780ENSMMUG00000048382-6969.048Macaca_mulatta
ENSORLG00015000018pabpn17969.519ENSMNEG00000035750-9975.352Macaca_nemestrina
ENSORLG00015000018pabpn19976.395ENSMNEG00000045065BCL2L2-PABPN18476.824Macaca_nemestrina
ENSORLG00015000018pabpn17267.066ENSMLEG00000034623-9973.239Mandrillus_leucophaeus
ENSORLG00015000018pabpn18184.737ENSMLEG00000043862BCL2L2-PABPN19482.738Mandrillus_leucophaeus
ENSORLG00015000018pabpn110096.575ENSMAMG00000007979pabpn110096.575Mastacembelus_armatus
ENSORLG00015000018pabpn110095.205ENSMZEG00005011904pabpn110095.205Maylandia_zebra
ENSORLG00015000018pabpn18682.524ENSMAUG00000007383Gm205217082.297Mesocricetus_auratus
ENSORLG00015000018pabpn19976.824ENSMICG00000010002BCL2L2-PABPN18476.824Microcebus_murinus
ENSORLG00015000018pabpn18682.039ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSORLG00015000018pabpn110099.138ENSMMOG00000005405pabpn110099.138Mola_mola
ENSORLG00015000018pabpn18579.703ENSMODG00000004535-6782.039Monodelphis_domestica
ENSORLG00015000018pabpn110097.260ENSMALG00000019612pabpn110097.260Monopterus_albus
ENSORLG00015000018pabpn18681.553MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSORLG00015000018pabpn18183.158MGP_CAROLIEiJ_G0019276Gm205215783.158Mus_caroli
ENSORLG00015000018pabpn18183.684ENSMUSG00000092232Gm205215783.684Mus_musculus
ENSORLG00015000018pabpn18682.039ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSORLG00015000018pabpn18682.039MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSORLG00015000018pabpn18183.684MGP_PahariEiJ_G0030294Gm205215783.684Mus_pahari
ENSORLG00015000018pabpn18682.039MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSORLG00015000018pabpn18183.684MGP_SPRETEiJ_G0020165Gm205215783.684Mus_spretus
ENSORLG00015000018pabpn16682.692ENSMPUG00000006775-8784.932Mustela_putorius_furo
ENSORLG00015000018pabpn18481.818ENSMLUG00000028677-8573.305Myotis_lucifugus
ENSORLG00015000018pabpn18183.684ENSMLUG00000003800-10083.684Myotis_lucifugus
ENSORLG00015000018pabpn18880.000ENSMLUG00000012452-6980.000Myotis_lucifugus
ENSORLG00015000018pabpn18184.737ENSNGAG00000019529Gm205215784.737Nannospalax_galili
ENSORLG00015000018pabpn110095.548ENSNBRG00000023955pabpn110099.432Neolamprologus_brichardi
ENSORLG00015000018pabpn18669.268ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSORLG00015000018pabpn18683.010ENSNLEG00000015007-7482.775Nomascus_leucogenys
ENSORLG00015000018pabpn16460.811ENSNLEG00000035292-9960.811Nomascus_leucogenys
ENSORLG00015000018pabpn17673.184ENSODEG00000011555-8972.024Octodon_degus
ENSORLG00015000018pabpn18674.384ENSODEG00000003739-6676.216Octodon_degus
ENSORLG00015000018pabpn18682.524ENSODEG00000002083BCL2L2-PABPN16882.297Octodon_degus
ENSORLG00015000018pabpn110095.548ENSONIG00000008112pabpn110095.548Oreochromis_niloticus
ENSORLG00015000018pabpn16385.034ENSOANG00000009218-10085.034Ornithorhynchus_anatinus
ENSORLG00015000018pabpn18682.524ENSOCUG00000016174PABPN17682.297Oryctolagus_cuniculus
ENSORLG00015000018pabpn1100100.000ENSORLG00000027900pabpn1100100.000Oryzias_latipes
ENSORLG00015000018pabpn1100100.000ENSORLG00020004681pabpn1100100.000Oryzias_latipes_hni
ENSORLG00015000018pabpn110096.575ENSOMEG00000016618pabpn110096.575Oryzias_melastigma
ENSORLG00015000018pabpn18683.010ENSOGAG00000008710PABPN16882.775Otolemur_garnettii
ENSORLG00015000018pabpn18184.737ENSOARG00000019336BCL2L2-PABPN15284.737Ovis_aries
ENSORLG00015000018pabpn18184.737ENSPPAG00000028984BCL2L2-PABPN18784.932Pan_paniscus
ENSORLG00015000018pabpn17168.072ENSPPAG00000039421-9368.072Pan_paniscus
ENSORLG00015000018pabpn18683.010ENSPPRG00000010567PABPN16882.775Panthera_pardus
ENSORLG00015000018pabpn17182.738ENSPTIG00000001063BCL2L2-PABPN19482.738Panthera_tigris_altaica
ENSORLG00015000018pabpn19976.395ENSPTRG00000006167BCL2L28476.824Pan_troglodytes
ENSORLG00015000018pabpn110063.675ENSPTRG00000047273-9360.714Pan_troglodytes
ENSORLG00015000018pabpn18470.202ENSPANG00000023326-9976.056Papio_anubis
ENSORLG00015000018pabpn19976.395ENSPANG00000021100BCL2L2-PABPN18476.824Papio_anubis
ENSORLG00015000018pabpn110092.275ENSPKIG00000018052pabpn110095.279Paramormyrops_kingsleyae
ENSORLG00015000018pabpn17169.512ENSPKIG00000008340pabpn1l8468.023Paramormyrops_kingsleyae
ENSORLG00015000018pabpn110094.863ENSPKIG00000008144-10094.863Paramormyrops_kingsleyae
ENSORLG00015000018pabpn15876.866ENSPSIG00000011959-8484.348Pelodiscus_sinensis
ENSORLG00015000018pabpn19598.182ENSPMGG00000022027pabpn110090.068Periophthalmus_magnuspinnatus
ENSORLG00015000018pabpn18682.524ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSORLG00015000018pabpn17975.269ENSPMAG00000006212pabpn19966.802Petromyzon_marinus
ENSORLG00015000018pabpn18680.488ENSPCIG00000027751-6882.297Phascolarctos_cinereus
ENSORLG00015000018pabpn110097.009ENSPFOG00000010351pabpn110096.599Poecilia_formosa
ENSORLG00015000018pabpn110097.279ENSPLAG00000022696pabpn110097.279Poecilia_latipinna
ENSORLG00015000018pabpn110097.009ENSPMEG00000020856pabpn110097.009Poecilia_mexicana
ENSORLG00015000018pabpn110097.436ENSPREG00000011278pabpn110097.436Poecilia_reticulata
ENSORLG00015000018pabpn18182.990ENSPPYG00000005663PABPN16784.492Pongo_abelii
ENSORLG00015000018pabpn17969.792ENSPCAG00000005902PABPN16469.841Procavia_capensis
ENSORLG00015000018pabpn19976.824ENSPCOG00000028047BCL2L2-PABPN18476.824Propithecus_coquereli
ENSORLG00015000018pabpn18881.340ENSPVAG00000005270PABPN16880.861Pteropus_vampyrus
ENSORLG00015000018pabpn110098.707ENSPNYG00000013182pabpn110098.707Pundamilia_nyererei
ENSORLG00015000018pabpn18862.319ENSPNAG00000021666pabpn1l8469.591Pygocentrus_nattereri
ENSORLG00015000018pabpn110097.845ENSPNAG00000023526pabpn110097.845Pygocentrus_nattereri
ENSORLG00015000018pabpn18682.524ENSRNOG00000042195Pabpn16982.297Rattus_norvegicus
ENSORLG00015000018pabpn18871.770ENSRBIG00000042811-9567.841Rhinopithecus_bieti
ENSORLG00015000018pabpn18972.170ENSRBIG00000039547-7770.335Rhinopithecus_bieti
ENSORLG00015000018pabpn17584.831ENSRBIG00000040762BCL2L2-PABPN15286.905Rhinopithecus_bieti
ENSORLG00015000018pabpn18868.246ENSRROG00000036409-7065.066Rhinopithecus_roxellana
ENSORLG00015000018pabpn18872.947ENSRROG00000040409-7671.498Rhinopithecus_roxellana
ENSORLG00015000018pabpn17584.831ENSRROG00000045535BCL2L2-PABPN19482.738Rhinopithecus_roxellana
ENSORLG00015000018pabpn18179.310ENSSBOG00000026930BCL2L2-PABPN18784.932Saimiri_boliviensis_boliviensis
ENSORLG00015000018pabpn18182.011ENSSHAG00000014841-8784.211Sarcophilus_harrisii
ENSORLG00015000018pabpn19959.244ENSSHAG00000007707-9955.882Sarcophilus_harrisii
ENSORLG00015000018pabpn16173.944ENSSFOG00015015833pabpn1l7768.862Scleropages_formosus
ENSORLG00015000018pabpn110089.700ENSSFOG00015012565pabpn110089.700Scleropages_formosus
ENSORLG00015000018pabpn110095.690ENSSFOG00015014718pabpn110095.690Scleropages_formosus
ENSORLG00015000018pabpn110098.276ENSSMAG00000020157pabpn110098.276Scophthalmus_maximus
ENSORLG00015000018pabpn110098.630ENSSDUG00000020582pabpn110098.630Seriola_dumerili
ENSORLG00015000018pabpn110098.707ENSSLDG00000007118pabpn110098.707Seriola_lalandi_dorsalis
ENSORLG00015000018pabpn17184.524ENSSPUG00000018308-9484.524Sphenodon_punctatus
ENSORLG00015000018pabpn110097.854ENSSPAG00000021658pabpn110097.854Stegastes_partitus
ENSORLG00015000018pabpn18863.507ENSSSCG00000034805-7959.242Sus_scrofa
ENSORLG00015000018pabpn18683.010ENSSSCG00000002023PABPN16882.775Sus_scrofa
ENSORLG00015000018pabpn110096.983ENSTRUG00000023664pabpn110096.983Takifugu_rubripes
ENSORLG00015000018pabpn19293.023ENSTNIG00000005369pabpn19097.423Tetraodon_nigroviridis
ENSORLG00015000018pabpn18683.010ENSUAMG00000024460PABPN16882.775Ursus_americanus
ENSORLG00015000018pabpn18184.737ENSUMAG00000014288BCL2L2-PABPN15784.737Ursus_maritimus
ENSORLG00015000018pabpn18184.737ENSVVUG00000019912BCL2L2-PABPN17683.505Vulpes_vulpes
ENSORLG00015000018pabpn18485.714ENSXETG00000014597pabpn17382.407Xenopus_tropicalis
ENSORLG00015000018pabpn17585.714ENSXCOG00000005158pabpn19885.714Xiphophorus_couchianus
ENSORLG00015000018pabpn110097.863ENSXMAG00000006196pabpn110097.863Xiphophorus_maculatus

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