EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015000033 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 10315 bases
Position: chr23:3150437-3160751
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015022454	RRM_1	PF00076.22	4e-05	1	1
ENSORLP00015001239	RRM_1	PF00076.22	4.4e-05	1	1
ENSORLP00015022454	G-patch	PF01585.23	4.5e-13	1	1
ENSORLP00015001239	G-patch	PF01585.23	4.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015012969	-	2908	-	ENSORLP00015001239	425 (aa)	-	-
ENSORLT00015012984	-	1209	-	ENSORLP00015022454	402 (aa)	-	-

Gene Model

Click here to download ENSORLG00015000033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015000033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015000033	rbm17	100	83.292	ENSG00000134453	RBM17	100	83.292	Homo_sapiens
ENSORLG00015000033	rbm17	99	94.750	ENSAPOG00000007101	rbm17	99	94.750	Acanthochromis_polyacanthus
ENSORLG00015000033	rbm17	100	83.538	ENSAMEG00000002107	RBM17	100	83.538	Ailuropoda_melanoleuca
ENSORLG00015000033	rbm17	100	91.358	ENSACIG00000006251	rbm17	100	91.358	Amphilophus_citrinellus
ENSORLG00015000033	rbm17	100	94.802	ENSAOCG00000014892	rbm17	100	94.802	Amphiprion_ocellaris
ENSORLG00015000033	rbm17	100	94.802	ENSAPEG00000022779	rbm17	100	94.802	Amphiprion_percula
ENSORLG00015000033	rbm17	99	92.162	ENSATEG00000004406	rbm17	100	92.162	Anabas_testudineus
ENSORLG00015000033	rbm17	100	83.824	ENSAPLG00000004190	RBM17	100	83.824	Anas_platyrhynchos
ENSORLG00015000033	rbm17	89	80.053	ENSACAG00000005418	RBM17	99	80.053	Anolis_carolinensis
ENSORLG00015000033	rbm17	100	71.078	ENSANAG00000019330	-	95	87.931	Aotus_nancymaae
ENSORLG00015000033	rbm17	100	83.784	ENSANAG00000030127	RBM17	97	90.000	Aotus_nancymaae
ENSORLG00015000033	rbm17	100	90.842	ENSACLG00000003928	rbm17	100	90.842	Astatotilapia_calliptera
ENSORLG00015000033	rbm17	99	82.033	ENSAMXG00000005853	rbm17	100	83.924	Astyanax_mexicanus
ENSORLG00015000033	rbm17	100	83.538	ENSBTAG00000021951	RBM17	100	83.538	Bos_taurus
ENSORLG00015000033	rbm17	100	82.310	ENSBTAG00000011094	-	100	82.310	Bos_taurus
ENSORLG00015000033	rbm17	74	34.951	WBGene00010233	F58B3.7	97	32.289	Caenorhabditis_elegans
ENSORLG00015000033	rbm17	100	83.784	ENSCJAG00000020573	RBM17	100	83.784	Callithrix_jacchus
ENSORLG00015000033	rbm17	100	83.538	ENSCAFG00000005206	RBM17	100	83.538	Canis_familiaris
ENSORLG00015000033	rbm17	100	79.506	ENSCAFG00020005420	RBM17	100	81.235	Canis_lupus_dingo
ENSORLG00015000033	rbm17	100	81.327	ENSCHIG00000019921	-	100	80.098	Capra_hircus
ENSORLG00015000033	rbm17	100	83.538	ENSCHIG00000023204	-	100	83.538	Capra_hircus
ENSORLG00015000033	rbm17	100	82.927	ENSTSYG00000001165	RBM17	99	90.678	Carlito_syrichta
ENSORLG00015000033	rbm17	96	63.683	ENSCAPG00000006275	RBM17	100	67.209	Cavia_aperea
ENSORLG00015000033	rbm17	100	79.024	ENSCPOG00000005679	RBM17	100	79.024	Cavia_porcellus
ENSORLG00015000033	rbm17	100	83.784	ENSCCAG00000018655	RBM17	97	90.000	Cebus_capucinus
ENSORLG00015000033	rbm17	100	83.292	ENSCATG00000041566	RBM17	97	90.000	Cercocebus_atys
ENSORLG00015000033	rbm17	100	82.927	ENSCLAG00000012195	RBM17	99	82.927	Chinchilla_lanigera
ENSORLG00015000033	rbm17	100	83.292	ENSCSAG00000013564	RBM17	100	83.292	Chlorocebus_sabaeus
ENSORLG00015000033	rbm17	92	67.021	ENSCHOG00000005131	RBM17	100	67.021	Choloepus_hoffmanni
ENSORLG00015000033	rbm17	100	83.578	ENSCPBG00000019836	RBM17	100	83.578	Chrysemys_picta_bellii
ENSORLG00015000033	rbm17	100	47.689	ENSCSAVG00000008782	-	100	46.341	Ciona_savignyi
ENSORLG00015000033	rbm17	100	83.047	ENSCANG00000030987	RBM17	97	90.000	Colobus_angolensis_palliatus
ENSORLG00015000033	rbm17	98	74.619	ENSCANG00000023715	-	99	74.619	Colobus_angolensis_palliatus
ENSORLG00015000033	rbm17	100	66.339	ENSCGRG00001009256	-	100	65.356	Cricetulus_griseus_chok1gshd
ENSORLG00015000033	rbm17	100	82.927	ENSCGRG00001013842	Rbm17	100	82.927	Cricetulus_griseus_chok1gshd
ENSORLG00015000033	rbm17	100	82.927	ENSCGRG00000006907	Rbm17	100	82.927	Cricetulus_griseus_crigri
ENSORLG00015000033	rbm17	100	86.914	ENSCSEG00000018164	rbm17	100	86.967	Cynoglossus_semilaevis
ENSORLG00015000033	rbm17	100	85.891	ENSCVAG00000002476	rbm17	100	85.891	Cyprinodon_variegatus
ENSORLG00015000033	rbm17	100	79.433	ENSDARG00000031346	rbm17	100	80.047	Danio_rerio
ENSORLG00015000033	rbm17	100	83.292	ENSDNOG00000035920	RBM17	100	83.292	Dasypus_novemcinctus
ENSORLG00015000033	rbm17	99	36.564	FBgn0086683	Spf45	99	37.778	Drosophila_melanogaster
ENSORLG00015000033	rbm17	100	64.938	ENSETEG00000006642	RBM17	100	64.938	Echinops_telfairi
ENSORLG00015000033	rbm17	63	69.048	ENSEBUG00000010253	rbm17	84	69.048	Eptatretus_burgeri
ENSORLG00015000033	rbm17	100	78.484	ENSEASG00005019205	-	100	79.951	Equus_asinus_asinus
ENSORLG00015000033	rbm17	92	80.585	ENSEASG00005009236	-	100	80.585	Equus_asinus_asinus
ENSORLG00015000033	rbm17	100	73.710	ENSECAG00000001379	-	100	73.710	Equus_caballus
ENSORLG00015000033	rbm17	100	70.617	ENSECAG00000008939	RBM17	100	71.852	Equus_caballus
ENSORLG00015000033	rbm17	86	66.286	ENSEEUG00000013077	RBM17	100	64.857	Erinaceus_europaeus
ENSORLG00015000033	rbm17	99	84.149	ENSELUG00000006440	rbm17	100	84.149	Esox_lucius
ENSORLG00015000033	rbm17	100	83.538	ENSFCAG00000031988	RBM17	100	83.538	Felis_catus
ENSORLG00015000033	rbm17	100	82.598	ENSFALG00000001790	RBM17	100	82.598	Ficedula_albicollis
ENSORLG00015000033	rbm17	100	82.927	ENSFDAG00000007470	RBM17	100	82.927	Fukomys_damarensis
ENSORLG00015000033	rbm17	99	90.610	ENSFHEG00000001266	rbm17	100	89.720	Fundulus_heteroclitus
ENSORLG00015000033	rbm17	99	81.340	ENSGMOG00000008438	rbm17	100	81.340	Gadus_morhua
ENSORLG00015000033	rbm17	100	84.069	ENSGALG00000006332	RBM17	100	84.069	Gallus_gallus
ENSORLG00015000033	rbm17	100	92.327	ENSGAFG00000019879	rbm17	100	92.327	Gambusia_affinis
ENSORLG00015000033	rbm17	99	90.323	ENSGACG00000019174	rbm17	99	90.323	Gasterosteus_aculeatus
ENSORLG00015000033	rbm17	100	83.578	ENSGAGG00000019906	RBM17	100	83.578	Gopherus_agassizii
ENSORLG00015000033	rbm17	100	94.802	ENSHBUG00000016624	rbm17	100	94.802	Haplochromis_burtoni
ENSORLG00015000033	rbm17	100	82.927	ENSHGLG00000011580	RBM17	100	82.927	Heterocephalus_glaber_female
ENSORLG00015000033	rbm17	100	67.076	ENSHGLG00100010556	-	100	64.128	Heterocephalus_glaber_male
ENSORLG00015000033	rbm17	100	82.927	ENSHGLG00100010460	RBM17	100	82.927	Heterocephalus_glaber_male
ENSORLG00015000033	rbm17	98	87.589	ENSHCOG00000010865	rbm17	100	87.589	Hippocampus_comes
ENSORLG00015000033	rbm17	99	80.000	ENSIPUG00000007699	Rbm17	100	81.412	Ictalurus_punctatus
ENSORLG00015000033	rbm17	100	82.927	ENSSTOG00000013591	RBM17	100	82.927	Ictidomys_tridecemlineatus
ENSORLG00015000033	rbm17	100	61.671	ENSJJAG00000000993	-	100	60.391	Jaculus_jaculus
ENSORLG00015000033	rbm17	100	82.927	ENSJJAG00000022886	Rbm17	100	82.927	Jaculus_jaculus
ENSORLG00015000033	rbm17	99	90.974	ENSKMAG00000021400	rbm17	100	90.974	Kryptolebias_marmoratus
ENSORLG00015000033	rbm17	100	91.337	ENSLBEG00000000881	rbm17	100	90.261	Labrus_bergylta
ENSORLG00015000033	rbm17	99	65.258	ENSLACG00000017297	RBM17	99	65.728	Latimeria_chalumnae
ENSORLG00015000033	rbm17	100	82.885	ENSLOCG00000015659	rbm17	100	82.152	Lepisosteus_oculatus
ENSORLG00015000033	rbm17	100	82.282	ENSLAFG00000011629	RBM17	100	82.282	Loxodonta_africana
ENSORLG00015000033	rbm17	100	83.292	ENSMFAG00000035521	RBM17	97	90.000	Macaca_fascicularis
ENSORLG00015000033	rbm17	100	83.292	ENSMMUG00000015152	RBM17	97	90.000	Macaca_mulatta
ENSORLG00015000033	rbm17	100	83.292	ENSMNEG00000017264	RBM17	97	90.000	Macaca_nemestrina
ENSORLG00015000033	rbm17	100	83.292	ENSMLEG00000029340	RBM17	97	90.000	Mandrillus_leucophaeus
ENSORLG00015000033	rbm17	99	91.211	ENSMAMG00000000387	rbm17	100	91.211	Mastacembelus_armatus
ENSORLG00015000033	rbm17	99	93.349	ENSMZEG00005015179	rbm17	100	93.349	Maylandia_zebra
ENSORLG00015000033	rbm17	100	82.850	ENSMGAG00000003981	RBM17	100	82.850	Meleagris_gallopavo
ENSORLG00015000033	rbm17	100	82.927	ENSMAUG00000019247	Rbm17	100	82.927	Mesocricetus_auratus
ENSORLG00015000033	rbm17	100	82.927	ENSMICG00000003976	-	100	82.927	Microcebus_murinus
ENSORLG00015000033	rbm17	100	77.053	ENSMICG00000041489	-	100	77.053	Microcebus_murinus
ENSORLG00015000033	rbm17	93	65.263	ENSMOCG00000014517	-	99	65.789	Microtus_ochrogaster
ENSORLG00015000033	rbm17	100	82.927	ENSMOCG00000011847	Rbm17	100	82.927	Microtus_ochrogaster
ENSORLG00015000033	rbm17	100	84.841	ENSMMOG00000010264	rbm17	100	84.841	Mola_mola
ENSORLG00015000033	rbm17	100	83.047	ENSMODG00000016648	RBM17	100	83.047	Monodelphis_domestica
ENSORLG00015000033	rbm17	99	89.573	ENSMALG00000010597	rbm17	100	90.758	Monopterus_albus
ENSORLG00015000033	rbm17	100	82.927	MGP_CAROLIEiJ_G0023173	Rbm17	100	82.927	Mus_caroli
ENSORLG00015000033	rbm17	100	82.927	ENSMUSG00000037197	Rbm17	100	82.927	Mus_musculus
ENSORLG00015000033	rbm17	100	82.927	MGP_PahariEiJ_G0019233	Rbm17	100	82.927	Mus_pahari
ENSORLG00015000033	rbm17	100	82.927	MGP_SPRETEiJ_G0024091	Rbm17	100	82.927	Mus_spretus
ENSORLG00015000033	rbm17	86	81.714	ENSMPUG00000016359	RBM17	96	81.714	Mustela_putorius_furo
ENSORLG00015000033	rbm17	100	81.022	ENSMLUG00000002302	-	100	81.022	Myotis_lucifugus
ENSORLG00015000033	rbm17	100	78.922	ENSMLUG00000025709	-	100	78.378	Myotis_lucifugus
ENSORLG00015000033	rbm17	100	82.927	ENSNGAG00000000741	Rbm17	100	82.927	Nannospalax_galili
ENSORLG00015000033	rbm17	100	57.494	ENSNGAG00000000663	-	100	57.494	Nannospalax_galili
ENSORLG00015000033	rbm17	100	88.366	ENSNBRG00000018148	rbm17	100	88.366	Neolamprologus_brichardi
ENSORLG00015000033	rbm17	100	83.292	ENSNLEG00000033350	RBM17	100	87.903	Nomascus_leucogenys
ENSORLG00015000033	rbm17	100	77.641	ENSMEUG00000011347	RBM17	100	76.413	Notamacropus_eugenii
ENSORLG00015000033	rbm17	100	72.236	ENSOPRG00000002993	RBM17	100	72.236	Ochotona_princeps
ENSORLG00015000033	rbm17	97	64.141	ENSODEG00000007286	-	99	62.879	Octodon_degus
ENSORLG00015000033	rbm17	100	82.968	ENSODEG00000004393	RBM17	100	82.968	Octodon_degus
ENSORLG00015000033	rbm17	100	94.089	ENSONIG00000011838	rbm17	100	94.089	Oreochromis_niloticus
ENSORLG00015000033	rbm17	100	82.598	ENSOANG00000015455	RBM17	100	82.843	Ornithorhynchus_anatinus
ENSORLG00015000033	rbm17	99	99.761	ENSORLG00000028798	rbm17	100	99.761	Oryzias_latipes
ENSORLG00015000033	rbm17	100	99.059	ENSORLG00020004593	rbm17	99	99.059	Oryzias_latipes_hni
ENSORLG00015000033	rbm17	99	98.329	ENSOMEG00000012060	rbm17	100	98.329	Oryzias_melastigma
ENSORLG00015000033	rbm17	100	83.171	ENSOGAG00000015687	RBM17	100	83.171	Otolemur_garnettii
ENSORLG00015000033	rbm17	100	83.538	ENSOARG00000012975	RBM17	100	83.538	Ovis_aries
ENSORLG00015000033	rbm17	100	83.292	ENSPPAG00000032347	RBM17	97	90.000	Pan_paniscus
ENSORLG00015000033	rbm17	100	83.538	ENSPPRG00000010706	RBM17	100	83.538	Panthera_pardus
ENSORLG00015000033	rbm17	100	83.538	ENSPTIG00000007596	RBM17	100	83.538	Panthera_tigris_altaica
ENSORLG00015000033	rbm17	100	83.292	ENSPTRG00000002265	RBM17	97	90.000	Pan_troglodytes
ENSORLG00015000033	rbm17	100	83.292	ENSPANG00000023425	RBM17	97	90.000	Papio_anubis
ENSORLG00015000033	rbm17	100	78.873	ENSPKIG00000025526	rbm17	100	79.625	Paramormyrops_kingsleyae
ENSORLG00015000033	rbm17	99	77.209	ENSPKIG00000005048	-	100	78.140	Paramormyrops_kingsleyae
ENSORLG00015000033	rbm17	100	82.195	ENSPSIG00000012332	RBM17	100	82.195	Pelodiscus_sinensis
ENSORLG00015000033	rbm17	100	86.173	ENSPMGG00000007980	rbm17	100	86.173	Periophthalmus_magnuspinnatus
ENSORLG00015000033	rbm17	100	82.927	ENSPEMG00000014320	Rbm17	100	82.927	Peromyscus_maniculatus_bairdii
ENSORLG00015000033	rbm17	100	82.641	ENSPCIG00000019260	-	100	82.641	Phascolarctos_cinereus
ENSORLG00015000033	rbm17	99	91.686	ENSPFOG00000013271	rbm17	100	91.686	Poecilia_formosa
ENSORLG00015000033	rbm17	99	91.686	ENSPLAG00000004455	rbm17	100	91.686	Poecilia_latipinna
ENSORLG00015000033	rbm17	100	92.822	ENSPMEG00000014864	rbm17	100	92.822	Poecilia_mexicana
ENSORLG00015000033	rbm17	99	91.686	ENSPREG00000015589	rbm17	100	91.686	Poecilia_reticulata
ENSORLG00015000033	rbm17	99	61.975	ENSPPYG00000019881	-	100	61.975	Pongo_abelii
ENSORLG00015000033	rbm17	100	83.292	ENSPPYG00000002067	RBM17	100	83.292	Pongo_abelii
ENSORLG00015000033	rbm17	81	58.841	ENSPPYG00000019042	-	100	58.841	Pongo_abelii
ENSORLG00015000033	rbm17	100	75.921	ENSPCAG00000016879	RBM17	100	75.921	Procavia_capensis
ENSORLG00015000033	rbm17	100	83.538	ENSPCOG00000027881	RBM17	100	83.538	Propithecus_coquereli
ENSORLG00015000033	rbm17	100	74.201	ENSPVAG00000015499	RBM17	100	72.973	Pteropus_vampyrus
ENSORLG00015000033	rbm17	100	83.168	ENSPNYG00000015274	rbm17	100	83.416	Pundamilia_nyererei
ENSORLG00015000033	rbm17	99	82.033	ENSPNAG00000030046	rbm17	100	83.924	Pygocentrus_nattereri
ENSORLG00015000033	rbm17	100	82.927	ENSRNOG00000018767	Rbm17	100	82.927	Rattus_norvegicus
ENSORLG00015000033	rbm17	100	83.292	ENSRBIG00000043727	RBM17	97	90.000	Rhinopithecus_bieti
ENSORLG00015000033	rbm17	100	83.292	ENSRROG00000044142	RBM17	97	90.000	Rhinopithecus_roxellana
ENSORLG00015000033	rbm17	100	83.538	ENSSBOG00000031661	-	93	91.304	Saimiri_boliviensis_boliviensis
ENSORLG00015000033	rbm17	100	74.447	ENSSBOG00000023653	-	100	74.201	Saimiri_boliviensis_boliviensis
ENSORLG00015000033	rbm17	100	83.047	ENSSHAG00000012480	-	100	83.047	Sarcophilus_harrisii
ENSORLG00015000033	rbm17	100	82.152	ENSSFOG00015009892	rbm17	100	83.130	Scleropages_formosus
ENSORLG00015000033	rbm17	99	87.037	ENSSMAG00000012368	rbm17	100	87.037	Scophthalmus_maximus
ENSORLG00015000033	rbm17	100	91.748	ENSSDUG00000015015	rbm17	100	91.748	Seriola_dumerili
ENSORLG00015000033	rbm17	100	91.748	ENSSLDG00000014486	rbm17	100	91.748	Seriola_lalandi_dorsalis
ENSORLG00015000033	rbm17	99	83.498	ENSSPUG00000001036	RBM17	99	83.498	Sphenodon_punctatus
ENSORLG00015000033	rbm17	100	94.307	ENSSPAG00000002338	rbm17	100	94.307	Stegastes_partitus
ENSORLG00015000033	rbm17	100	83.538	ENSSSCG00000011134	RBM17	100	83.538	Sus_scrofa
ENSORLG00015000033	rbm17	100	81.995	ENSTGUG00000002013	RBM17	100	81.995	Taeniopygia_guttata
ENSORLG00015000033	rbm17	100	91.832	ENSTRUG00000010698	rbm17	100	91.832	Takifugu_rubripes
ENSORLG00015000033	rbm17	100	90.394	ENSTNIG00000006892	rbm17	100	90.394	Tetraodon_nigroviridis
ENSORLG00015000033	rbm17	100	64.444	ENSTBEG00000014686	RBM17	100	64.444	Tupaia_belangeri
ENSORLG00015000033	rbm17	90	82.787	ENSTTRG00000001344	RBM17	100	82.787	Tursiops_truncatus
ENSORLG00015000033	rbm17	100	79.753	ENSUAMG00000009499	RBM17	100	79.753	Ursus_americanus
ENSORLG00015000033	rbm17	100	83.538	ENSUMAG00000012237	RBM17	100	83.538	Ursus_maritimus
ENSORLG00015000033	rbm17	100	71.007	ENSVPAG00000005497	RBM17	100	71.007	Vicugna_pacos
ENSORLG00015000033	rbm17	100	79.506	ENSVVUG00000006780	RBM17	100	81.235	Vulpes_vulpes
ENSORLG00015000033	rbm17	99	79.753	ENSXETG00000018123	rbm17	100	79.506	Xenopus_tropicalis
ENSORLG00015000033	rbm17	100	92.574	ENSXMAG00000008674	rbm17	100	92.574	Xiphophorus_maculatus