EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015000142 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-34d22.5
Alias: -
Full Name: si:dkey-34d22.5
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 2200 bases
Position: chr16:23144332-23146531
Accession: ZDB-GENE-131121-578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015004296	MMR_HSR1	PF01926.23	5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015007839	-	1471	-	ENSORLP00015004296	217 (aa)	-	-

Gene Model

Click here to download ENSORLG00015000142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015000142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015000142	si:dkey-34d22.5	75	37.805	ENSORLG00015021900	rab5c	87	36.364
ENSORLG00015000142	si:dkey-34d22.5	74	47.239	ENSORLG00015013638	rab15	76	47.239
ENSORLG00015000142	si:dkey-34d22.5	78	33.333	ENSORLG00015000584	rab34b	63	33.333
ENSORLG00015000142	si:dkey-34d22.5	80	36.364	ENSORLG00015012725	rab25a	58	36.364
ENSORLG00015000142	si:dkey-34d22.5	76	43.976	ENSORLG00015004377	RAB15	79	43.976
ENSORLG00015000142	si:dkey-34d22.5	72	31.481	ENSORLG00015010005	dnajc27	59	31.481
ENSORLG00015000142	si:dkey-34d22.5	70	31.169	ENSORLG00015008252	si:ch73-116o1.2	79	31.325
ENSORLG00015000142	si:dkey-34d22.5	97	38.967	ENSORLG00015010042	rab35b	98	38.967
ENSORLG00015000142	si:dkey-34d22.5	75	31.928	ENSORLG00015002284	rerg	82	31.928
ENSORLG00015000142	si:dkey-34d22.5	97	37.209	ENSORLG00015010098	zgc:171927	98	37.209
ENSORLG00015000142	si:dkey-34d22.5	98	33.645	ENSORLG00015019591	rab11al	96	33.645
ENSORLG00015000142	si:dkey-34d22.5	77	42.012	ENSORLG00015015518	-	84	42.012
ENSORLG00015000142	si:dkey-34d22.5	79	34.463	ENSORLG00015006820	-	84	34.463
ENSORLG00015000142	si:dkey-34d22.5	86	55.851	ENSORLG00015022289	-	88	55.851
ENSORLG00015000142	si:dkey-34d22.5	71	32.692	ENSORLG00015011467	kras	88	31.953
ENSORLG00015000142	si:dkey-34d22.5	76	41.916	ENSORLG00015013564	-	81	42.945
ENSORLG00015000142	si:dkey-34d22.5	76	30.952	ENSORLG00015019530	rasd4	79	30.952
ENSORLG00015000142	si:dkey-34d22.5	77	37.870	ENSORLG00015016946	rab11ba	63	37.870
ENSORLG00015000142	si:dkey-34d22.5	97	38.498	ENSORLG00015020900	rab2a	99	38.498
ENSORLG00015000142	si:dkey-34d22.5	67	41.892	ENSORLG00015016047	zgc:101559	63	41.892
ENSORLG00015000142	si:dkey-34d22.5	74	34.337	ENSORLG00015002344	-	80	34.337
ENSORLG00015000142	si:dkey-34d22.5	76	42.515	ENSORLG00015010986	rab1ab	82	42.515
ENSORLG00015000142	si:dkey-34d22.5	65	33.333	ENSORLG00015010289	rras	79	32.484
ENSORLG00015000142	si:dkey-34d22.5	96	36.667	ENSORLG00015013537	rab6bb	94	36.667
ENSORLG00015000142	si:dkey-34d22.5	88	42.784	ENSORLG00015006881	rab14	89	42.784
ENSORLG00015000142	si:dkey-34d22.5	75	43.293	ENSORLG00015004739	rab18a	80	43.293
ENSORLG00015000142	si:dkey-34d22.5	85	36.126	ENSORLG00015015121	si:dkey-13a21.4	92	36.126
ENSORLG00015000142	si:dkey-34d22.5	67	39.189	ENSORLG00015012872	rab33ba	62	39.189
ENSORLG00015000142	si:dkey-34d22.5	98	31.818	ENSORLG00015020173	rab11bb	96	31.818
ENSORLG00015000142	si:dkey-34d22.5	81	40.884	ENSORLG00015000618	-	89	40.884
ENSORLG00015000142	si:dkey-34d22.5	69	33.333	ENSORLG00015003353	zgc:55558	87	32.515
ENSORLG00015000142	si:dkey-34d22.5	74	41.104	ENSORLG00015014594	rab3db	73	41.104
ENSORLG00015000142	si:dkey-34d22.5	88	32.843	ENSORLG00015020495	rasl11a	78	32.843
ENSORLG00015000142	si:dkey-34d22.5	78	35.632	ENSORLG00015014829	rab34a	65	35.632
ENSORLG00015000142	si:dkey-34d22.5	97	57.277	ENSORLG00015004273	rab42a	98	57.277
ENSORLG00015000142	si:dkey-34d22.5	86	55.319	ENSORLG00015003202	RAB39B	88	55.319
ENSORLG00015000142	si:dkey-34d22.5	67	41.830	ENSORLG00015013453	-	69	40.120
ENSORLG00015000142	si:dkey-34d22.5	90	39.801	ENSORLG00015006970	rab6ba	94	39.801
ENSORLG00015000142	si:dkey-34d22.5	75	35.976	ENSORLG00015017737	rab5ab	75	35.976
ENSORLG00015000142	si:dkey-34d22.5	72	40.252	ENSORLG00015007869	rab12	83	34.434
ENSORLG00015000142	si:dkey-34d22.5	76	41.667	ENSORLG00015010161	RAB41	77	41.667
ENSORLG00015000142	si:dkey-34d22.5	97	41.395	ENSORLG00015000893	-	97	41.395
ENSORLG00015000142	si:dkey-34d22.5	98	33.178	ENSORLG00015010257	rab11a	96	33.178
ENSORLG00015000142	si:dkey-34d22.5	75	32.716	ENSORLG00015014268	rabl2	70	32.716
ENSORLG00015000142	si:dkey-34d22.5	81	38.798	ENSORLG00015015327	rab33a	66	38.798
ENSORLG00015000142	si:dkey-34d22.5	71	34.615	ENSORLG00015001298	rhebl1	84	34.615
ENSORLG00015000142	si:dkey-34d22.5	71	32.258	ENSORLG00015002191	rheb	83	32.258
ENSORLG00015000142	si:dkey-34d22.5	94	32.394	ENSORLG00015016999	RAB11B	97	32.394
ENSORLG00015000142	si:dkey-34d22.5	80	37.297	ENSORLG00015004265	rab9b	88	37.297
ENSORLG00015000142	si:dkey-34d22.5	71	40.645	ENSORLG00015004033	rab23	74	40.260
ENSORLG00015000142	si:dkey-34d22.5	75	37.195	ENSORLG00015012854	rab5aa	75	37.195
ENSORLG00015000142	si:dkey-34d22.5	71	31.613	ENSORLG00015006780	-	83	31.613
ENSORLG00015000142	si:dkey-34d22.5	76	41.667	ENSORLG00015006162	rab6a	78	41.667
ENSORLG00015000142	si:dkey-34d22.5	80	35.795	ENSORLG00015019569	rab25b	86	36.471
ENSORLG00015000142	si:dkey-34d22.5	75	43.030	ENSORLG00015020972	rab30	80	43.030
ENSORLG00015000142	si:dkey-34d22.5	75	43.902	ENSORLG00015007182	rab18b	80	43.902
ENSORLG00015000142	si:dkey-34d22.5	82	33.333	ENSORLG00015020441	-	90	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015000142	si:dkey-34d22.5	99	83.710	ENSACIG00000016958	si:dkey-34d22.5	99	83.710	Amphilophus_citrinellus
ENSORLG00015000142	si:dkey-34d22.5	99	87.330	ENSATEG00000010784	si:dkey-34d22.5	86	87.330	Anabas_testudineus
ENSORLG00015000142	si:dkey-34d22.5	99	60.092	ENSCPBG00000011236	-	99	60.092	Chrysemys_picta_bellii
ENSORLG00015000142	si:dkey-34d22.5	99	79.638	ENSCSEG00000019183	si:dkey-34d22.5	99	79.638	Cynoglossus_semilaevis
ENSORLG00015000142	si:dkey-34d22.5	99	83.258	ENSCVAG00000017064	si:dkey-34d22.5	99	83.258	Cyprinodon_variegatus
ENSORLG00015000142	si:dkey-34d22.5	83	51.648	ENSDARG00000100379	si:dkey-34d22.2	99	51.648	Danio_rerio
ENSORLG00015000142	si:dkey-34d22.5	97	59.906	ENSFALG00000001373	-	97	59.906	Ficedula_albicollis
ENSORLG00015000142	si:dkey-34d22.5	99	84.685	ENSFHEG00000012041	si:dkey-34d22.5	99	84.685	Fundulus_heteroclitus
ENSORLG00015000142	si:dkey-34d22.5	87	62.632	ENSGALG00000000994	-	90	62.632	Gallus_gallus
ENSORLG00015000142	si:dkey-34d22.5	99	85.068	ENSGAFG00000008183	si:dkey-34d22.5	99	85.068	Gambusia_affinis
ENSORLG00015000142	si:dkey-34d22.5	94	59.024	ENSGAGG00000004918	-	99	59.024	Gopherus_agassizii
ENSORLG00015000142	si:dkey-34d22.5	100	74.208	ENSHCOG00000015692	si:dkey-34d22.5	100	74.208	Hippocampus_comes
ENSORLG00015000142	si:dkey-34d22.5	99	87.330	ENSKMAG00000012778	si:dkey-34d22.5	99	87.330	Kryptolebias_marmoratus
ENSORLG00015000142	si:dkey-34d22.5	99	82.353	ENSLBEG00000002926	si:dkey-34d22.5	100	82.353	Labrus_bergylta
ENSORLG00015000142	si:dkey-34d22.5	98	59.070	ENSLACG00000012674	si:dkey-34d22.5	99	59.070	Latimeria_chalumnae
ENSORLG00015000142	si:dkey-34d22.5	98	68.837	ENSLOCG00000003467	si:dkey-34d22.5	98	71.163	Lepisosteus_oculatus
ENSORLG00015000142	si:dkey-34d22.5	99	83.636	ENSMMOG00000006846	si:dkey-34d22.5	99	83.636	Mola_mola
ENSORLG00015000142	si:dkey-34d22.5	99	81.900	ENSMALG00000013152	si:dkey-34d22.5	99	81.900	Monopterus_albus
ENSORLG00015000142	si:dkey-34d22.5	100	99.539	ENSORLG00000014099	si:dkey-34d22.5	100	99.539	Oryzias_latipes
ENSORLG00015000142	si:dkey-34d22.5	100	99.078	ENSORLG00020020277	si:dkey-34d22.5	100	99.078	Oryzias_latipes_hni
ENSORLG00015000142	si:dkey-34d22.5	100	94.118	ENSOMEG00000017958	si:dkey-34d22.5	100	94.118	Oryzias_melastigma
ENSORLG00015000142	si:dkey-34d22.5	99	75.342	ENSPKIG00000021209	si:dkey-34d22.5	100	75.342	Paramormyrops_kingsleyae
ENSORLG00015000142	si:dkey-34d22.5	91	63.317	ENSPSIG00000006606	-	99	63.317	Pelodiscus_sinensis
ENSORLG00015000142	si:dkey-34d22.5	99	83.636	ENSPMGG00000001298	-	99	83.636	Periophthalmus_magnuspinnatus
ENSORLG00015000142	si:dkey-34d22.5	93	59.606	ENSPCIG00000022399	-	91	59.606	Phascolarctos_cinereus
ENSORLG00015000142	si:dkey-34d22.5	99	85.520	ENSPFOG00000014499	si:dkey-34d22.5	99	85.520	Poecilia_formosa
ENSORLG00015000142	si:dkey-34d22.5	99	85.520	ENSPLAG00000007773	si:dkey-34d22.5	99	85.520	Poecilia_latipinna
ENSORLG00015000142	si:dkey-34d22.5	99	85.520	ENSPMEG00000012932	si:dkey-34d22.5	99	85.520	Poecilia_mexicana
ENSORLG00015000142	si:dkey-34d22.5	89	60.000	ENSSHAG00000008520	-	88	60.000	Sarcophilus_harrisii
ENSORLG00015000142	si:dkey-34d22.5	99	70.183	ENSSFOG00015012088	rab42	98	70.183	Scleropages_formosus
ENSORLG00015000142	si:dkey-34d22.5	99	90.000	ENSSLDG00000002646	si:dkey-34d22.5	99	90.000	Seriola_lalandi_dorsalis
ENSORLG00015000142	si:dkey-34d22.5	100	89.640	ENSSPAG00000012955	si:dkey-34d22.5	100	89.640	Stegastes_partitus
ENSORLG00015000142	si:dkey-34d22.5	92	49.751	ENSXETG00000020622	rab39a	98	49.751	Xenopus_tropicalis
ENSORLG00015000142	si:dkey-34d22.5	99	84.615	ENSXCOG00000008410	si:dkey-34d22.5	99	84.615	Xiphophorus_couchianus
ENSORLG00015000142	si:dkey-34d22.5	99	84.615	ENSXMAG00000029317	si:dkey-34d22.5	99	84.615	Xiphophorus_maculatus