EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015000202 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-63e15.2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 58505 bases
Position: chr4:2623315-2681819
Accession: 29158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015025763	ResIII	PF04851.15	2.9e-07	1	1
ENSORLP00015006257	ResIII	PF04851.15	3.1e-07	1	1
ENSORLP00015006282	ResIII	PF04851.15	3.1e-07	1	1
ENSORLP00015025846	ResIII	PF04851.15	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015004474	-	7471	-	ENSORLP00015006282	1481 (aa)	-	-
ENSORLT00015004530	-	7645	-	ENSORLP00015006257	1474 (aa)	-	-
ENSORLT00015004581	-	5841	-	ENSORLP00015025763	1447 (aa)	-	-
ENSORLT00015004370	-	7625	-	ENSORLP00015025846	1557 (aa)	-	-

Gene Model

Click here to download ENSORLG00015000202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015000202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015000202	si:ch73-63e15.2	70	58.004	ENSORLG00015002726	sbno1	70	65.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015000202	si:ch73-63e15.2	78	66.695	ENSG00000064932	SBNO2	88	67.637	Homo_sapiens
ENSORLG00015000202	si:ch73-63e15.2	100	79.140	ENSAPOG00000003185	si:ch73-63e15.2	100	79.032	Acanthochromis_polyacanthus
ENSORLG00015000202	si:ch73-63e15.2	100	80.184	ENSAOCG00000016581	si:ch73-63e15.2	95	86.934	Amphiprion_ocellaris
ENSORLG00015000202	si:ch73-63e15.2	100	80.053	ENSAPEG00000008862	si:ch73-63e15.2	100	80.739	Amphiprion_percula
ENSORLG00015000202	si:ch73-63e15.2	91	81.416	ENSATEG00000023838	si:ch73-63e15.2	95	88.854	Anabas_testudineus
ENSORLG00015000202	si:ch73-63e15.2	76	72.174	ENSAPLG00000007158	SBNO2	89	71.750	Anas_platyrhynchos
ENSORLG00015000202	si:ch73-63e15.2	78	66.099	ENSANAG00000026685	SBNO2	89	66.781	Aotus_nancymaae
ENSORLG00015000202	si:ch73-63e15.2	100	77.464	ENSACLG00000005090	si:ch73-63e15.2	100	77.674	Astatotilapia_calliptera
ENSORLG00015000202	si:ch73-63e15.2	78	80.899	ENSAMXG00000015881	si:ch73-63e15.2	99	68.176	Astyanax_mexicanus
ENSORLG00015000202	si:ch73-63e15.2	79	80.017	ENSAMXG00000018868	sbno2a	96	79.649	Astyanax_mexicanus
ENSORLG00015000202	si:ch73-63e15.2	78	67.231	ENSBTAG00000020780	SBNO2	88	67.723	Bos_taurus
ENSORLG00015000202	si:ch73-63e15.2	77	67.873	ENSCAFG00000019543	SBNO2	90	64.286	Canis_familiaris
ENSORLG00015000202	si:ch73-63e15.2	77	67.873	ENSCAFG00020017115	SBNO2	95	64.286	Canis_lupus_dingo
ENSORLG00015000202	si:ch73-63e15.2	77	67.784	ENSCHIG00000026127	SBNO2	85	68.257	Capra_hircus
ENSORLG00015000202	si:ch73-63e15.2	77	66.753	ENSCAPG00000005731	SBNO2	94	66.696	Cavia_aperea
ENSORLG00015000202	si:ch73-63e15.2	77	66.926	ENSCPOG00000007477	SBNO2	86	66.524	Cavia_porcellus
ENSORLG00015000202	si:ch73-63e15.2	78	66.525	ENSCCAG00000037518	SBNO2	89	67.209	Cebus_capucinus
ENSORLG00015000202	si:ch73-63e15.2	78	66.809	ENSCATG00000037046	SBNO2	88	67.466	Cercocebus_atys
ENSORLG00015000202	si:ch73-63e15.2	78	67.869	ENSCLAG00000010178	SBNO2	99	67.962	Chinchilla_lanigera
ENSORLG00015000202	si:ch73-63e15.2	77	67.558	ENSCSAG00000012317	SBNO2	90	64.612	Chlorocebus_sabaeus
ENSORLG00015000202	si:ch73-63e15.2	77	70.306	ENSCPBG00000008920	SBNO2	80	83.945	Chrysemys_picta_bellii
ENSORLG00015000202	si:ch73-63e15.2	74	66.874	ENSCANG00000036745	SBNO2	96	67.229	Colobus_angolensis_palliatus
ENSORLG00015000202	si:ch73-63e15.2	77	66.263	ENSCGRG00001023960	Sbno2	84	66.521	Cricetulus_griseus_chok1gshd
ENSORLG00015000202	si:ch73-63e15.2	77	67.675	ENSCGRG00000011984	Sbno2	85	67.647	Cricetulus_griseus_crigri
ENSORLG00015000202	si:ch73-63e15.2	80	81.910	ENSCSEG00000006856	si:ch73-63e15.2	98	85.112	Cynoglossus_semilaevis
ENSORLG00015000202	si:ch73-63e15.2	100	76.678	ENSCVAG00000005663	si:ch73-63e15.2	100	76.643	Cyprinodon_variegatus
ENSORLG00015000202	si:ch73-63e15.2	79	77.536	ENSDARG00000098801	sbno2a	92	75.351	Danio_rerio
ENSORLG00015000202	si:ch73-63e15.2	99	67.722	ENSDARG00000016188	SBNO2	82	79.965	Danio_rerio
ENSORLG00015000202	si:ch73-63e15.2	78	67.857	ENSDORG00000002916	Sbno2	90	65.737	Dipodomys_ordii
ENSORLG00015000202	si:ch73-63e15.2	78	67.263	ENSEASG00005021621	SBNO2	88	67.894	Equus_asinus_asinus
ENSORLG00015000202	si:ch73-63e15.2	78	67.434	ENSECAG00000011827	SBNO2	88	67.979	Equus_caballus
ENSORLG00015000202	si:ch73-63e15.2	99	72.159	ENSELUG00000020457	si:ch73-63e15.2	99	71.466	Esox_lucius
ENSORLG00015000202	si:ch73-63e15.2	78	70.904	ENSFALG00000013988	SBNO2	92	66.927	Ficedula_albicollis
ENSORLG00015000202	si:ch73-63e15.2	76	65.481	ENSFDAG00000015186	SBNO2	87	65.655	Fukomys_damarensis
ENSORLG00015000202	si:ch73-63e15.2	92	82.500	ENSFHEG00000022262	si:ch73-63e15.2	100	76.997	Fundulus_heteroclitus
ENSORLG00015000202	si:ch73-63e15.2	78	84.675	ENSGMOG00000007542	si:ch73-63e15.2	96	84.675	Gadus_morhua
ENSORLG00015000202	si:ch73-63e15.2	79	70.805	ENSGALG00000037522	SBNO2	93	65.716	Gallus_gallus
ENSORLG00015000202	si:ch73-63e15.2	79	88.936	ENSGAFG00000004860	si:ch73-63e15.2	93	88.936	Gambusia_affinis
ENSORLG00015000202	si:ch73-63e15.2	77	86.776	ENSGACG00000013190	si:ch73-63e15.2	94	87.052	Gasterosteus_aculeatus
ENSORLG00015000202	si:ch73-63e15.2	88	66.617	ENSGAGG00000008348	SBNO2	97	66.417	Gopherus_agassizii
ENSORLG00015000202	si:ch73-63e15.2	100	77.485	ENSHBUG00000010742	si:ch73-63e15.2	100	78.628	Haplochromis_burtoni
ENSORLG00015000202	si:ch73-63e15.2	77	68.162	ENSHGLG00000008739	SBNO2	90	64.411	Heterocephalus_glaber_female
ENSORLG00015000202	si:ch73-63e15.2	78	67.436	ENSHGLG00100005269	SBNO2	99	67.612	Heterocephalus_glaber_male
ENSORLG00015000202	si:ch73-63e15.2	80	84.602	ENSHCOG00000000884	si:ch73-63e15.2	96	78.648	Hippocampus_comes
ENSORLG00015000202	si:ch73-63e15.2	77	81.261	ENSIPUG00000000537	si:ch73-63e15.2	84	79.913	Ictalurus_punctatus
ENSORLG00015000202	si:ch73-63e15.2	77	82.558	ENSIPUG00000019672	sbno2	99	75.141	Ictalurus_punctatus
ENSORLG00015000202	si:ch73-63e15.2	77	67.581	ENSSTOG00000025832	SBNO2	87	66.361	Ictidomys_tridecemlineatus
ENSORLG00015000202	si:ch73-63e15.2	77	65.184	ENSJJAG00000017397	Sbno2	91	62.371	Jaculus_jaculus
ENSORLG00015000202	si:ch73-63e15.2	100	77.815	ENSKMAG00000005541	si:ch73-63e15.2	100	77.324	Kryptolebias_marmoratus
ENSORLG00015000202	si:ch73-63e15.2	100	77.937	ENSLBEG00000025016	si:ch73-63e15.2	95	89.892	Labrus_bergylta
ENSORLG00015000202	si:ch73-63e15.2	77	84.164	ENSLOCG00000004643	si:ch73-63e15.2	83	84.439	Lepisosteus_oculatus
ENSORLG00015000202	si:ch73-63e15.2	76	65.271	ENSLAFG00000008824	SBNO2	89	65.145	Loxodonta_africana
ENSORLG00015000202	si:ch73-63e15.2	78	65.675	ENSMFAG00000040030	SBNO2	90	66.325	Macaca_fascicularis
ENSORLG00015000202	si:ch73-63e15.2	77	67.731	ENSMMUG00000010886	SBNO2	90	64.612	Macaca_mulatta
ENSORLG00015000202	si:ch73-63e15.2	78	66.894	ENSMNEG00000039927	SBNO2	88	67.551	Macaca_nemestrina
ENSORLG00015000202	si:ch73-63e15.2	71	68.382	ENSMLEG00000038556	SBNO2	98	64.751	Mandrillus_leucophaeus
ENSORLG00015000202	si:ch73-63e15.2	100	76.593	ENSMAMG00000018758	si:ch73-63e15.2	100	77.113	Mastacembelus_armatus
ENSORLG00015000202	si:ch73-63e15.2	100	77.646	ENSMZEG00005010682	si:ch73-63e15.2	100	77.472	Maylandia_zebra
ENSORLG00015000202	si:ch73-63e15.2	78	71.090	ENSMGAG00000003801	SBNO2	90	70.943	Meleagris_gallopavo
ENSORLG00015000202	si:ch73-63e15.2	77	67.532	ENSMAUG00000008034	Sbno2	85	67.792	Mesocricetus_auratus
ENSORLG00015000202	si:ch73-63e15.2	78	67.093	ENSMICG00000013071	SBNO2	88	67.637	Microcebus_murinus
ENSORLG00015000202	si:ch73-63e15.2	77	68.080	ENSMOCG00000010504	Sbno2	85	67.876	Microtus_ochrogaster
ENSORLG00015000202	si:ch73-63e15.2	78	69.669	ENSMODG00000005382	SBNO2	86	67.625	Monodelphis_domestica
ENSORLG00015000202	si:ch73-63e15.2	63	83.896	ENSMALG00000021831	si:ch73-63e15.2	96	83.896	Monopterus_albus
ENSORLG00015000202	si:ch73-63e15.2	77	67.098	ENSMUSG00000035673	Sbno2	93	67.617	Mus_musculus
ENSORLG00015000202	si:ch73-63e15.2	77	67.098	MGP_PahariEiJ_G0030976	Sbno2	84	67.773	Mus_pahari
ENSORLG00015000202	si:ch73-63e15.2	77	67.358	MGP_SPRETEiJ_G0016381	Sbno2	90	68.035	Mus_spretus
ENSORLG00015000202	si:ch73-63e15.2	66	70.400	ENSMPUG00000008747	SBNO2	91	70.600	Mustela_putorius_furo
ENSORLG00015000202	si:ch73-63e15.2	77	66.924	ENSNGAG00000004308	Sbno2	86	67.186	Nannospalax_galili
ENSORLG00015000202	si:ch73-63e15.2	82	88.123	ENSNBRG00000022968	si:ch73-63e15.2	99	88.660	Neolamprologus_brichardi
ENSORLG00015000202	si:ch73-63e15.2	74	69.031	ENSNLEG00000001305	SBNO2	89	69.712	Nomascus_leucogenys
ENSORLG00015000202	si:ch73-63e15.2	64	66.947	ENSMEUG00000013511	-	78	66.632	Notamacropus_eugenii
ENSORLG00015000202	si:ch73-63e15.2	77	67.591	ENSOPRG00000017238	SBNO2	93	68.453	Ochotona_princeps
ENSORLG00015000202	si:ch73-63e15.2	77	67.586	ENSODEG00000011822	SBNO2	85	67.509	Octodon_degus
ENSORLG00015000202	si:ch73-63e15.2	100	78.760	ENSONIG00000002490	si:ch73-63e15.2	98	85.940	Oreochromis_niloticus
ENSORLG00015000202	si:ch73-63e15.2	100	99.585	ENSORLG00000000913	si:ch73-63e15.2	100	99.585	Oryzias_latipes
ENSORLG00015000202	si:ch73-63e15.2	100	99.460	ENSORLG00020010978	si:ch73-63e15.2	100	99.460	Oryzias_latipes_hni
ENSORLG00015000202	si:ch73-63e15.2	100	94.772	ENSOMEG00000000359	si:ch73-63e15.2	100	94.452	Oryzias_melastigma
ENSORLG00015000202	si:ch73-63e15.2	77	65.034	ENSOARG00000011130	SBNO2	86	65.455	Ovis_aries
ENSORLG00015000202	si:ch73-63e15.2	78	65.709	ENSPPAG00000032482	SBNO2	90	66.638	Pan_paniscus
ENSORLG00015000202	si:ch73-63e15.2	78	66.610	ENSPTRG00000010185	SBNO2	88	67.551	Pan_troglodytes
ENSORLG00015000202	si:ch73-63e15.2	78	63.574	ENSPANG00000009658	SBNO2	87	64.041	Papio_anubis
ENSORLG00015000202	si:ch73-63e15.2	90	82.738	ENSPKIG00000024201	si:ch73-63e15.2	83	82.780	Paramormyrops_kingsleyae
ENSORLG00015000202	si:ch73-63e15.2	70	77.821	ENSPKIG00000009707	-	84	77.821	Paramormyrops_kingsleyae
ENSORLG00015000202	si:ch73-63e15.2	65	72.563	ENSPSIG00000002852	SBNO2	99	72.362	Pelodiscus_sinensis
ENSORLG00015000202	si:ch73-63e15.2	80	83.432	ENSPMGG00000014375	si:ch73-63e15.2	92	83.094	Periophthalmus_magnuspinnatus
ENSORLG00015000202	si:ch73-63e15.2	77	67.132	ENSPEMG00000024122	Sbno2	84	67.222	Peromyscus_maniculatus_bairdii
ENSORLG00015000202	si:ch73-63e15.2	77	71.466	ENSPCIG00000011264	SBNO2	88	67.201	Phascolarctos_cinereus
ENSORLG00015000202	si:ch73-63e15.2	100	75.596	ENSPFOG00000004096	si:ch73-63e15.2	99	86.844	Poecilia_formosa
ENSORLG00015000202	si:ch73-63e15.2	100	76.067	ENSPLAG00000014653	si:ch73-63e15.2	100	77.216	Poecilia_latipinna
ENSORLG00015000202	si:ch73-63e15.2	100	76.643	ENSPMEG00000002129	si:ch73-63e15.2	90	90.000	Poecilia_mexicana
ENSORLG00015000202	si:ch73-63e15.2	100	75.775	ENSPREG00000006755	si:ch73-63e15.2	100	75.323	Poecilia_reticulata
ENSORLG00015000202	si:ch73-63e15.2	71	69.061	ENSPCAG00000012256	SBNO2	76	68.852	Procavia_capensis
ENSORLG00015000202	si:ch73-63e15.2	78	61.722	ENSPCOG00000015216	SBNO2	88	62.072	Propithecus_coquereli
ENSORLG00015000202	si:ch73-63e15.2	100	77.873	ENSPNYG00000019926	si:ch73-63e15.2	100	78.393	Pundamilia_nyererei
ENSORLG00015000202	si:ch73-63e15.2	78	82.627	ENSPNAG00000020260	si:ch73-63e15.2	83	82.134	Pygocentrus_nattereri
ENSORLG00015000202	si:ch73-63e15.2	78	81.074	ENSPNAG00000026609	sbno2a	99	68.756	Pygocentrus_nattereri
ENSORLG00015000202	si:ch73-63e15.2	77	67.244	ENSRNOG00000013987	Sbno2	88	67.944	Rattus_norvegicus
ENSORLG00015000202	si:ch73-63e15.2	72	65.963	ENSRBIG00000009740	SBNO2	87	66.791	Rhinopithecus_bieti
ENSORLG00015000202	si:ch73-63e15.2	69	69.039	ENSRROG00000044671	SBNO2	85	69.632	Rhinopithecus_roxellana
ENSORLG00015000202	si:ch73-63e15.2	78	66.183	ENSSBOG00000023562	SBNO2	89	66.867	Saimiri_boliviensis_boliviensis
ENSORLG00015000202	si:ch73-63e15.2	76	70.351	ENSSHAG00000010241	SBNO2	97	70.106	Sarcophilus_harrisii
ENSORLG00015000202	si:ch73-63e15.2	90	81.161	ENSSFOG00015005861	si:ch73-63e15.2	93	81.337	Scleropages_formosus
ENSORLG00015000202	si:ch73-63e15.2	100	77.343	ENSSMAG00000012489	si:ch73-63e15.2	100	77.721	Scophthalmus_maximus
ENSORLG00015000202	si:ch73-63e15.2	100	77.357	ENSSDUG00000003527	si:ch73-63e15.2	100	77.920	Seriola_dumerili
ENSORLG00015000202	si:ch73-63e15.2	100	76.972	ENSSLDG00000004623	si:ch73-63e15.2	100	77.535	Seriola_lalandi_dorsalis
ENSORLG00015000202	si:ch73-63e15.2	91	83.543	ENSSPAG00000017717	si:ch73-63e15.2	100	80.785	Stegastes_partitus
ENSORLG00015000202	si:ch73-63e15.2	78	66.892	ENSSSCG00000030042	SBNO2	89	67.551	Sus_scrofa
ENSORLG00015000202	si:ch73-63e15.2	76	86.148	ENSTRUG00000018193	si:ch73-63e15.2	87	86.148	Takifugu_rubripes
ENSORLG00015000202	si:ch73-63e15.2	70	68.618	ENSUAMG00000006568	SBNO2	93	70.561	Ursus_americanus
ENSORLG00015000202	si:ch73-63e15.2	77	67.873	ENSVVUG00000022823	SBNO2	82	68.139	Vulpes_vulpes
ENSORLG00015000202	si:ch73-63e15.2	72	74.701	ENSXETG00000021579	sbno2	89	75.100	Xenopus_tropicalis
ENSORLG00015000202	si:ch73-63e15.2	89	87.789	ENSXCOG00000009209	si:ch73-63e15.2	94	87.789	Xiphophorus_couchianus
ENSORLG00015000202	si:ch73-63e15.2	100	76.893	ENSXMAG00000012091	si:ch73-63e15.2	91	87.922	Xiphophorus_maculatus