EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015000300 (Gene tree)
Gene ID: -
Gene Symbol: parn
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 9327 bases
Position: chr1:23548670-23557996
Accession: 101157188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015008910	RNA_bind	PF08675.11	1.3e-32	1	1
ENSORLP00015008910	CAF1	PF04857.20	1e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015000015	-	2903	XM_023958584	ENSORLP00015008910	669 (aa)	XP_023814352	-

Gene Model

Click here to download ENSORLG00015000300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015000300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015000300	parn	88	70.984	ENSG00000140694	PARN	93	79.661	Homo_sapiens
ENSORLG00015000300	parn	100	64.255	ENSAMEG00000011208	PARN	83	76.909	Ailuropoda_melanoleuca
ENSORLG00015000300	parn	88	77.621	ENSACIG00000000619	parn	99	77.778	Amphilophus_citrinellus
ENSORLG00015000300	parn	100	81.977	ENSAOCG00000003465	parn	100	81.831	Amphiprion_ocellaris
ENSORLG00015000300	parn	73	88.187	ENSAPEG00000010661	parn	94	88.187	Amphiprion_percula
ENSORLG00015000300	parn	100	81.752	ENSATEG00000004661	parn	100	81.460	Anabas_testudineus
ENSORLG00015000300	parn	99	64.521	ENSAPLG00000013914	PARN	99	63.717	Anas_platyrhynchos
ENSORLG00015000300	parn	85	72.449	ENSACAG00000004973	PARN	90	72.128	Anolis_carolinensis
ENSORLG00015000300	parn	86	72.712	ENSANAG00000031516	PARN	91	79.661	Aotus_nancymaae
ENSORLG00015000300	parn	100	81.176	ENSACLG00000004742	parn	100	81.232	Astatotilapia_calliptera
ENSORLG00015000300	parn	100	72.131	ENSAMXG00000012390	parn	97	74.627	Astyanax_mexicanus
ENSORLG00015000300	parn	88	67.823	ENSBTAG00000018097	PARN	95	67.823	Bos_taurus
ENSORLG00015000300	parn	86	72.712	ENSCJAG00000015866	PARN	91	79.661	Callithrix_jacchus
ENSORLG00015000300	parn	96	66.975	ENSCAFG00000018795	PARN	90	72.539	Canis_familiaris
ENSORLG00015000300	parn	96	67.130	ENSCAFG00020024126	PARN	90	72.712	Canis_lupus_dingo
ENSORLG00015000300	parn	85	72.945	ENSCHIG00000018143	PARN	91	72.945	Capra_hircus
ENSORLG00015000300	parn	71	50.813	ENSCAPG00000007984	PARN	79	50.813	Cavia_aperea
ENSORLG00015000300	parn	85	71.282	ENSCPOG00000002263	PARN	91	71.282	Cavia_porcellus
ENSORLG00015000300	parn	86	72.712	ENSCCAG00000030367	PARN	91	79.661	Cebus_capucinus
ENSORLG00015000300	parn	80	77.425	ENSCATG00000041368	PARN	98	79.661	Cercocebus_atys
ENSORLG00015000300	parn	85	72.696	ENSCLAG00000015406	PARN	91	72.696	Chinchilla_lanigera
ENSORLG00015000300	parn	88	71.148	ENSCSAG00000008142	PARN	95	71.148	Chlorocebus_sabaeus
ENSORLG00015000300	parn	84	56.920	ENSCHOG00000007014	PARN	91	56.920	Choloepus_hoffmanni
ENSORLG00015000300	parn	79	69.763	ENSCPBG00000006609	PARN	94	69.763	Chrysemys_picta_bellii
ENSORLG00015000300	parn	76	41.948	ENSCING00000010142	-	99	41.948	Ciona_intestinalis
ENSORLG00015000300	parn	88	60.674	ENSCANG00000028849	-	92	79.661	Colobus_angolensis_palliatus
ENSORLG00015000300	parn	85	72.964	ENSCGRG00001012096	Parn	91	72.964	Cricetulus_griseus_chok1gshd
ENSORLG00015000300	parn	85	72.964	ENSCGRG00000004939	Parn	91	72.964	Cricetulus_griseus_crigri
ENSORLG00015000300	parn	100	78.280	ENSCSEG00000002064	parn	100	78.134	Cynoglossus_semilaevis
ENSORLG00015000300	parn	100	84.141	ENSCVAG00000014848	parn	100	83.847	Cyprinodon_variegatus
ENSORLG00015000300	parn	100	67.257	ENSDARG00000102634	parn	100	79.091	Danio_rerio
ENSORLG00015000300	parn	88	70.984	ENSDNOG00000000833	PARN	94	77.799	Dasypus_novemcinctus
ENSORLG00015000300	parn	62	73.106	ENSETEG00000014828	-	69	73.106	Echinops_telfairi
ENSORLG00015000300	parn	88	70.328	ENSEASG00005011400	PARN	91	72.774	Equus_asinus_asinus
ENSORLG00015000300	parn	88	70.000	ENSECAG00000017792	PARN	91	72.432	Equus_caballus
ENSORLG00015000300	parn	87	63.964	ENSEEUG00000010370	PARN	82	63.964	Erinaceus_europaeus
ENSORLG00015000300	parn	100	72.661	ENSELUG00000013139	parn	90	72.368	Esox_lucius
ENSORLG00015000300	parn	85	72.712	ENSFCAG00000044961	PARN	86	77.966	Felis_catus
ENSORLG00015000300	parn	87	70.569	ENSFALG00000003911	PARN	93	70.618	Ficedula_albicollis
ENSORLG00015000300	parn	85	71.603	ENSFDAG00000009234	PARN	91	71.603	Fukomys_damarensis
ENSORLG00015000300	parn	88	79.236	ENSFHEG00000013738	parn	92	91.525	Fundulus_heteroclitus
ENSORLG00015000300	parn	82	83.029	ENSGMOG00000003231	parn	99	83.029	Gadus_morhua
ENSORLG00015000300	parn	85	72.289	ENSGALG00000003091	PARN	91	72.289	Gallus_gallus
ENSORLG00015000300	parn	100	81.924	ENSGAFG00000011061	parn	100	81.778	Gambusia_affinis
ENSORLG00015000300	parn	100	74.003	ENSGACG00000019501	parn	99	80.163	Gasterosteus_aculeatus
ENSORLG00015000300	parn	88	70.984	ENSGGOG00000025224	PARN	96	79.661	Gorilla_gorilla
ENSORLG00015000300	parn	100	81.818	ENSHBUG00000017906	parn	100	81.818	Haplochromis_burtoni
ENSORLG00015000300	parn	85	71.624	ENSHGLG00000010886	PARN	98	67.943	Heterocephalus_glaber_female
ENSORLG00015000300	parn	85	71.624	ENSHGLG00100014659	PARN	98	67.943	Heterocephalus_glaber_male
ENSORLG00015000300	parn	81	80.586	ENSHCOG00000008683	parn	94	80.586	Hippocampus_comes
ENSORLG00015000300	parn	100	62.389	ENSIPUG00000012401	parn	100	61.708	Ictalurus_punctatus
ENSORLG00015000300	parn	84	72.759	ENSSTOG00000007519	PARN	91	72.759	Ictidomys_tridecemlineatus
ENSORLG00015000300	parn	86	71.897	ENSJJAG00000023049	Parn	92	71.897	Jaculus_jaculus
ENSORLG00015000300	parn	100	84.311	ENSKMAG00000009462	parn	100	84.164	Kryptolebias_marmoratus
ENSORLG00015000300	parn	93	83.466	ENSLBEG00000009167	parn	97	84.279	Labrus_bergylta
ENSORLG00015000300	parn	75	73.861	ENSLACG00000004207	PARN	100	73.349	Latimeria_chalumnae
ENSORLG00015000300	parn	100	70.349	ENSLOCG00000000715	parn	100	69.767	Lepisosteus_oculatus
ENSORLG00015000300	parn	88	70.978	ENSLAFG00000015036	PARN	95	70.978	Loxodonta_africana
ENSORLG00015000300	parn	88	67.541	ENSMFAG00000044852	PARN	93	79.661	Macaca_fascicularis
ENSORLG00015000300	parn	88	70.984	ENSMMUG00000018849	PARN	93	79.661	Macaca_mulatta
ENSORLG00015000300	parn	88	70.984	ENSMNEG00000045108	PARN	93	79.661	Macaca_nemestrina
ENSORLG00015000300	parn	88	70.820	ENSMLEG00000031743	PARN	93	79.661	Mandrillus_leucophaeus
ENSORLG00015000300	parn	100	81.659	ENSMAMG00000006939	parn	100	81.368	Mastacembelus_armatus
ENSORLG00015000300	parn	100	81.324	ENSMZEG00005013590	parn	100	81.378	Maylandia_zebra
ENSORLG00015000300	parn	81	71.993	ENSMGAG00000001004	PARN	87	71.993	Meleagris_gallopavo
ENSORLG00015000300	parn	50	34.247	ENSMAUG00000012298	Pnldc1	68	34.247	Mesocricetus_auratus
ENSORLG00015000300	parn	85	66.723	ENSMAUG00000008025	Parn	91	66.327	Mesocricetus_auratus
ENSORLG00015000300	parn	88	70.656	ENSMICG00000016053	PARN	93	77.966	Microcebus_murinus
ENSORLG00015000300	parn	74	77.733	ENSMOCG00000022211	Parn	100	77.733	Microtus_ochrogaster
ENSORLG00015000300	parn	82	84.991	ENSMMOG00000011333	parn	90	84.991	Mola_mola
ENSORLG00015000300	parn	74	79.276	ENSMODG00000004915	PARN	99	79.276	Monodelphis_domestica
ENSORLG00015000300	parn	96	81.735	ENSMALG00000019426	parn	94	87.545	Monopterus_albus
ENSORLG00015000300	parn	88	68.937	MGP_CAROLIEiJ_G0020466	Parn	95	68.937	Mus_caroli
ENSORLG00015000300	parn	85	70.912	ENSMUSG00000022685	Parn	100	76.829	Mus_musculus
ENSORLG00015000300	parn	100	63.433	MGP_PahariEiJ_G0016172	Parn	95	68.771	Mus_pahari
ENSORLG00015000300	parn	85	71.084	MGP_SPRETEiJ_G0021361	Parn	91	71.084	Mus_spretus
ENSORLG00015000300	parn	85	72.945	ENSMPUG00000014464	PARN	91	72.945	Mustela_putorius_furo
ENSORLG00015000300	parn	74	76.768	ENSMLUG00000005414	PARN	100	76.768	Myotis_lucifugus
ENSORLG00015000300	parn	82	84.964	ENSNBRG00000006805	parn	93	85.145	Neolamprologus_brichardi
ENSORLG00015000300	parn	88	71.475	ENSNLEG00000010241	PARN	93	79.661	Nomascus_leucogenys
ENSORLG00015000300	parn	79	55.114	ENSMEUG00000008178	-	83	55.114	Notamacropus_eugenii
ENSORLG00015000300	parn	84	68.586	ENSOPRG00000012187	PARN	91	68.586	Ochotona_princeps
ENSORLG00015000300	parn	85	67.832	ENSODEG00000001617	PARN	94	65.662	Octodon_degus
ENSORLG00015000300	parn	100	82.258	ENSONIG00000000151	parn	100	82.258	Oreochromis_niloticus
ENSORLG00015000300	parn	88	70.248	ENSOCUG00000000322	PARN	94	70.248	Oryctolagus_cuniculus
ENSORLG00015000300	parn	100	99.402	ENSORLG00020010313	parn	100	99.402	Oryzias_latipes_hni
ENSORLG00015000300	parn	100	95.089	ENSOMEG00000019555	parn	100	95.089	Oryzias_melastigma
ENSORLG00015000300	parn	74	76.815	ENSOGAG00000014626	PARN	100	76.815	Otolemur_garnettii
ENSORLG00015000300	parn	74	78.586	ENSOARG00000007574	PARN	100	78.586	Ovis_aries
ENSORLG00015000300	parn	88	70.820	ENSPPAG00000031438	PARN	93	79.661	Pan_paniscus
ENSORLG00015000300	parn	85	72.712	ENSPPRG00000018583	PARN	86	77.966	Panthera_pardus
ENSORLG00015000300	parn	85	72.712	ENSPTIG00000012135	PARN	86	77.966	Panthera_tigris_altaica
ENSORLG00015000300	parn	88	70.820	ENSPTRG00000007792	PARN	93	79.661	Pan_troglodytes
ENSORLG00015000300	parn	88	68.852	ENSPANG00000020099	PARN	93	79.661	Papio_anubis
ENSORLG00015000300	parn	99	68.902	ENSPKIG00000022807	parn	92	73.129	Paramormyrops_kingsleyae
ENSORLG00015000300	parn	93	67.504	ENSPSIG00000014804	PARN	93	70.833	Pelodiscus_sinensis
ENSORLG00015000300	parn	88	77.946	ENSPMGG00000014431	parn	82	77.946	Periophthalmus_magnuspinnatus
ENSORLG00015000300	parn	85	71.181	ENSPEMG00000018439	Parn	91	71.181	Peromyscus_maniculatus_bairdii
ENSORLG00015000300	parn	80	67.161	ENSPMAG00000003956	parn	99	67.161	Petromyzon_marinus
ENSORLG00015000300	parn	63	70.991	ENSPCIG00000001259	PARN	91	79.661	Phascolarctos_cinereus
ENSORLG00015000300	parn	100	82.164	ENSPFOG00000012823	parn	100	81.725	Poecilia_formosa
ENSORLG00015000300	parn	100	82.164	ENSPLAG00000006395	parn	100	81.725	Poecilia_latipinna
ENSORLG00015000300	parn	100	82.310	ENSPMEG00000007711	parn	100	81.871	Poecilia_mexicana
ENSORLG00015000300	parn	100	82.310	ENSPREG00000000147	parn	100	81.871	Poecilia_reticulata
ENSORLG00015000300	parn	88	70.261	ENSPPYG00000007123	PARN	95	70.261	Pongo_abelii
ENSORLG00015000300	parn	84	61.872	ENSPCAG00000001741	PARN	95	61.872	Procavia_capensis
ENSORLG00015000300	parn	88	67.377	ENSPCOG00000019292	PARN	93	77.966	Propithecus_coquereli
ENSORLG00015000300	parn	79	74.291	ENSPVAG00000002547	PARN	83	74.291	Pteropus_vampyrus
ENSORLG00015000300	parn	100	81.912	ENSPNYG00000006835	parn	100	81.912	Pundamilia_nyererei
ENSORLG00015000300	parn	93	69.074	ENSPNAG00000018905	parn	100	69.074	Pygocentrus_nattereri
ENSORLG00015000300	parn	85	71.256	ENSRNOG00000002912	Parn	96	79.592	Rattus_norvegicus
ENSORLG00015000300	parn	86	70.847	ENSSBOG00000034726	PARN	88	79.661	Saimiri_boliviensis_boliviensis
ENSORLG00015000300	parn	62	77.804	ENSSHAG00000008493	PARN	94	77.804	Sarcophilus_harrisii
ENSORLG00015000300	parn	100	69.540	ENSSFOG00015014165	parn	98	73.957	Scleropages_formosus
ENSORLG00015000300	parn	100	78.255	ENSSMAG00000000685	parn	100	78.080	Scophthalmus_maximus
ENSORLG00015000300	parn	100	81.778	ENSSDUG00000014555	parn	100	81.778	Seriola_dumerili
ENSORLG00015000300	parn	65	78.391	ENSSARG00000014339	PARN	75	78.391	Sorex_araneus
ENSORLG00015000300	parn	87	70.805	ENSSPUG00000007719	PARN	95	69.672	Sphenodon_punctatus
ENSORLG00015000300	parn	100	83.187	ENSSPAG00000007095	parn	100	82.895	Stegastes_partitus
ENSORLG00015000300	parn	85	72.945	ENSSSCG00000007878	PARN	81	72.945	Sus_scrofa
ENSORLG00015000300	parn	88	70.500	ENSTGUG00000004971	PARN	94	70.549	Taeniopygia_guttata
ENSORLG00015000300	parn	100	74.926	ENSTNIG00000008252	parn	100	74.926	Tetraodon_nigroviridis
ENSORLG00015000300	parn	80	59.818	ENSTBEG00000010407	PARN	94	59.818	Tupaia_belangeri
ENSORLG00015000300	parn	72	78.029	ENSTTRG00000002843	PARN	77	78.029	Tursiops_truncatus
ENSORLG00015000300	parn	67	67.184	ENSUAMG00000008283	PARN	94	64.989	Ursus_americanus
ENSORLG00015000300	parn	100	64.493	ENSUMAG00000004527	PARN	83	77.239	Ursus_maritimus
ENSORLG00015000300	parn	87	67.496	ENSVPAG00000008968	PARN	97	67.496	Vicugna_pacos
ENSORLG00015000300	parn	96	66.975	ENSVVUG00000019509	PARN	90	72.539	Vulpes_vulpes
ENSORLG00015000300	parn	100	61.974	ENSXETG00000010994	parn	100	73.585	Xenopus_tropicalis
ENSORLG00015000300	parn	88	81.450	ENSXCOG00000015990	parn	99	81.450	Xiphophorus_couchianus
ENSORLG00015000300	parn	100	82.602	ENSXMAG00000014783	parn	100	82.456	Xiphophorus_maculatus