EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015000465 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-14h10.2
Alias: -
Full Name: si:ch73-14h10.2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 2707 bases
Position: chr4:28598214-28600920
Accession: ZDB-GENE-141222-67
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015031795	LSM	PF01423.22	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015033849	-	558	-	ENSORLP00015031795	124 (aa)	-	-

Gene Model

Click here to download ENSORLG00015000465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015000465's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSG00000204392	LSM2	100	75.806	Homo_sapiens
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSAPOG00000017967	si:ch73-14h10.2	100	76.613	Acanthochromis_polyacanthus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSAMEG00000006483	LSM2	100	75.610	Ailuropoda_melanoleuca
ENSORLG00015000465	si:ch73-14h10.2	99	76.423	ENSACIG00000007795	si:ch73-14h10.2	62	76.423	Amphilophus_citrinellus
ENSORLG00015000465	si:ch73-14h10.2	99	76.423	ENSAOCG00000006949	si:ch73-14h10.2	78	76.423	Amphiprion_ocellaris
ENSORLG00015000465	si:ch73-14h10.2	99	76.423	ENSAPEG00000020375	si:ch73-14h10.2	87	76.423	Amphiprion_percula
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSATEG00000011376	si:ch73-14h10.2	100	76.613	Anabas_testudineus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSACAG00000017281	LSM2	90	75.610	Anolis_carolinensis
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSANAG00000028372	LSM2	100	75.806	Aotus_nancymaae
ENSORLG00015000465	si:ch73-14h10.2	97	60.833	ENSANAG00000028033	-	96	60.833	Aotus_nancymaae
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSACLG00000024717	smx5	100	76.613	Astatotilapia_calliptera
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSAMXG00000036868	si:ch73-14h10.2	100	76.613	Astyanax_mexicanus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSBTAG00000005634	LSM2	100	75.806	Bos_taurus
ENSORLG00015000465	si:ch73-14h10.2	99	63.415	WBGene00001808	gut-2	97	63.415	Caenorhabditis_elegans
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSCJAG00000040899	LSM2	100	75.806	Callithrix_jacchus
ENSORLG00015000465	si:ch73-14h10.2	81	69.000	ENSCAFG00020016978	-	88	69.000	Canis_lupus_dingo
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSCHIG00000016153	LSM2	100	75.610	Capra_hircus
ENSORLG00015000465	si:ch73-14h10.2	99	68.293	ENSTSYG00000030015	-	100	68.293	Carlito_syrichta
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSTSYG00000034844	LSM2	100	75.806	Carlito_syrichta
ENSORLG00015000465	si:ch73-14h10.2	81	70.297	ENSCAPG00000009970	LSM2	92	70.297	Cavia_aperea
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSCPOG00000021053	LSM2	100	75.806	Cavia_porcellus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSCCAG00000024276	LSM2	100	75.806	Cebus_capucinus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSCATG00000013737	LSM2	100	75.806	Cercocebus_atys
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSCLAG00000008081	LSM2	100	75.806	Chinchilla_lanigera
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSCSAG00000008800	LSM2	100	75.806	Chlorocebus_sabaeus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSCHOG00000007702	LSM2	100	75.806	Choloepus_hoffmanni
ENSORLG00015000465	si:ch73-14h10.2	100	73.387	ENSCING00000022677	-	100	73.387	Ciona_intestinalis
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSCANG00000039576	LSM2	100	75.806	Colobus_angolensis_palliatus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSCGRG00001013932	Lsm2	100	75.806	Cricetulus_griseus_chok1gshd
ENSORLG00015000465	si:ch73-14h10.2	81	70.297	ENSCGRG00000013311	Lsm2	62	70.297	Cricetulus_griseus_crigri
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSCSEG00000002911	si:ch73-14h10.2	100	76.613	Cynoglossus_semilaevis
ENSORLG00015000465	si:ch73-14h10.2	99	76.423	ENSCVAG00000015394	si:ch73-14h10.2	89	76.423	Cyprinodon_variegatus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSDARG00000070867	smx5	100	75.806	Danio_rerio
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSDNOG00000002633	LSM2	100	75.610	Dasypus_novemcinctus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSDORG00000026571	Lsm2	100	75.806	Dipodomys_ordii
ENSORLG00015000465	si:ch73-14h10.2	97	72.500	FBgn0036277	CG10418	96	72.500	Drosophila_melanogaster
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSEASG00005015670	LSM2	79	75.610	Equus_asinus_asinus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSECAG00000018791	LSM2	79	75.610	Equus_caballus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSELUG00000008241	smx5	100	75.806	Esox_lucius
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSFCAG00000045887	LSM2	100	75.806	Felis_catus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSFDAG00000000390	LSM2	100	75.806	Fukomys_damarensis
ENSORLG00015000465	si:ch73-14h10.2	99	77.236	ENSFHEG00000009619	si:ch73-14h10.2	100	77.236	Fundulus_heteroclitus
ENSORLG00015000465	si:ch73-14h10.2	99	76.423	ENSGMOG00000019208	si:ch73-14h10.2	100	76.423	Gadus_morhua
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSGAFG00000017286	si:ch73-14h10.2	100	76.613	Gambusia_affinis
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSGACG00000003827	si:ch73-14h10.2	100	76.613	Gasterosteus_aculeatus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSGAGG00000012458	LSM2	100	75.806	Gopherus_agassizii
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSGGOG00000011383	LSM2	100	75.806	Gorilla_gorilla
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSHGLG00000011299	LSM2	100	75.806	Heterocephalus_glaber_female
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSHGLG00100017194	LSM2	100	75.806	Heterocephalus_glaber_male
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSHCOG00000014057	si:ch73-14h10.2	100	76.613	Hippocampus_comes
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSIPUG00000010539	lsm2	100	76.613	Ictalurus_punctatus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSSTOG00000013144	LSM2	100	75.806	Ictidomys_tridecemlineatus
ENSORLG00015000465	si:ch73-14h10.2	95	57.627	ENSJJAG00000019477	-	100	57.627	Jaculus_jaculus
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSKMAG00000014909	si:ch73-14h10.2	100	76.613	Kryptolebias_marmoratus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSLBEG00000025781	si:ch73-14h10.2	98	75.610	Labrus_bergylta
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSLACG00000015064	LSM2	100	76.613	Latimeria_chalumnae
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSLOCG00000005228	si:ch73-14h10.2	100	76.613	Lepisosteus_oculatus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSLAFG00000016139	LSM2	100	75.610	Loxodonta_africana
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSMFAG00000001016	LSM2	100	75.806	Macaca_fascicularis
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSMMUG00000006832	LSM2	100	75.806	Macaca_mulatta
ENSORLG00015000465	si:ch73-14h10.2	99	61.789	ENSMMUG00000045473	-	97	61.789	Macaca_mulatta
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSMNEG00000045355	LSM2	100	75.806	Macaca_nemestrina
ENSORLG00015000465	si:ch73-14h10.2	84	60.577	ENSMNEG00000040973	-	91	60.577	Macaca_nemestrina
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSMLEG00000037369	-	100	75.806	Mandrillus_leucophaeus
ENSORLG00015000465	si:ch73-14h10.2	99	60.976	ENSMLEG00000031181	-	97	60.976	Mandrillus_leucophaeus
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSMAMG00000010053	si:ch73-14h10.2	73	76.613	Mastacembelus_armatus
ENSORLG00015000465	si:ch73-14h10.2	99	78.049	ENSMZEG00005008688	si:ch73-14h10.2	100	78.049	Maylandia_zebra
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSMAUG00000021966	Lsm2	100	75.806	Mesocricetus_auratus
ENSORLG00015000465	si:ch73-14h10.2	81	56.436	ENSMICG00000046764	-	92	56.436	Microcebus_murinus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSMOCG00000015306	Lsm2	100	75.806	Microtus_ochrogaster
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSMMOG00000005603	si:ch73-14h10.2	100	75.610	Mola_mola
ENSORLG00015000465	si:ch73-14h10.2	99	76.423	ENSMODG00000015177	LSM2	99	76.423	Monodelphis_domestica
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSMALG00000016490	si:ch73-14h10.2	100	76.613	Monopterus_albus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	MGP_CAROLIEiJ_G0021490	Lsm2	100	75.806	Mus_caroli
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSMUSG00000007050	Lsm2	100	75.806	Mus_musculus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	MGP_PahariEiJ_G0020485	Lsm2	100	75.806	Mus_pahari
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	MGP_SPRETEiJ_G0022395	Lsm2	100	75.806	Mus_spretus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSNGAG00000003997	Lsm2	100	75.806	Nannospalax_galili
ENSORLG00015000465	si:ch73-14h10.2	99	78.049	ENSNBRG00000012904	si:ch73-14h10.2	100	78.049	Neolamprologus_brichardi
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSNLEG00000035542	LSM2	100	75.806	Nomascus_leucogenys
ENSORLG00015000465	si:ch73-14h10.2	81	71.000	ENSMEUG00000003419	LSM2	100	71.000	Notamacropus_eugenii
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSOPRG00000003668	LSM2	100	75.806	Ochotona_princeps
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSODEG00000017583	LSM2	100	75.806	Octodon_degus
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSONIG00000019321	si:ch73-14h10.2	100	76.613	Oreochromis_niloticus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSOANG00000005398	LSM2	100	75.610	Ornithorhynchus_anatinus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSOCUG00000002583	LSM2	100	75.806	Oryctolagus_cuniculus
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSORLG00000029858	si:ch73-14h10.2	100	76.613	Oryzias_latipes
ENSORLG00015000465	si:ch73-14h10.2	79	86.000	ENSORLG00020020223	smx5	85	86.000	Oryzias_latipes_hni
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSOMEG00000002892	si:ch73-14h10.2	100	76.613	Oryzias_melastigma
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSOARG00000004575	LSM2	100	75.610	Ovis_aries
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSPPAG00000032431	LSM2	100	75.806	Pan_paniscus
ENSORLG00015000465	si:ch73-14h10.2	84	61.538	ENSPPAG00000043941	-	93	61.538	Pan_paniscus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSPPRG00000015353	LSM2	100	75.806	Panthera_pardus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSPTIG00000010303	LSM2	99	75.610	Panthera_tigris_altaica
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSPTRG00000017986	LSM2	100	75.806	Pan_troglodytes
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSPANG00000024577	LSM2	100	75.806	Papio_anubis
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSPKIG00000007028	si:ch73-14h10.2	100	76.613	Paramormyrops_kingsleyae
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSPSIG00000004458	LSM2	78	75.610	Pelodiscus_sinensis
ENSORLG00015000465	si:ch73-14h10.2	99	74.797	ENSPMGG00000018511	si:ch73-14h10.2	100	74.797	Periophthalmus_magnuspinnatus
ENSORLG00015000465	si:ch73-14h10.2	99	76.423	ENSPCIG00000018560	-	95	76.423	Phascolarctos_cinereus
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSPFOG00000001621	si:ch73-14h10.2	100	76.613	Poecilia_formosa
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSPLAG00000017165	si:ch73-14h10.2	100	76.613	Poecilia_latipinna
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSPMEG00000019574	si:ch73-14h10.2	100	76.613	Poecilia_mexicana
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSPREG00000016534	si:ch73-14h10.2	100	75.610	Poecilia_reticulata
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSPPYG00000016461	-	54	75.806	Pongo_abelii
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSPCAG00000013737	LSM2	100	75.806	Procavia_capensis
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSPCOG00000020134	LSM2	100	75.806	Propithecus_coquereli
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSPVAG00000012405	LSM2	100	75.806	Pteropus_vampyrus
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSPNYG00000019298	smx5	100	76.613	Pundamilia_nyererei
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSPNAG00000027769	si:ch73-14h10.2	100	76.613	Pygocentrus_nattereri
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSRNOG00000048725	Lsm2	100	75.806	Rattus_norvegicus
ENSORLG00015000465	si:ch73-14h10.2	60	73.333	ENSRNOG00000011065	AC126899.1	96	73.333	Rattus_norvegicus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSRBIG00000010172	LSM2	100	75.806	Rhinopithecus_bieti
ENSORLG00015000465	si:ch73-14h10.2	84	61.538	ENSRBIG00000011356	-	91	61.538	Rhinopithecus_bieti
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSRROG00000030345	LSM2	100	75.806	Rhinopithecus_roxellana
ENSORLG00015000465	si:ch73-14h10.2	84	61.538	ENSRROG00000030708	-	91	61.538	Rhinopithecus_roxellana
ENSORLG00015000465	si:ch73-14h10.2	100	50.806	YBL026W	LSM2	100	50.806	Saccharomyces_cerevisiae
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSSBOG00000018943	LSM2	100	75.806	Saimiri_boliviensis_boliviensis
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSSFOG00015006734	lsm2	100	76.613	Scleropages_formosus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSSMAG00000001122	si:ch73-14h10.2	100	75.806	Scophthalmus_maximus
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSSDUG00000021605	smx5	100	76.613	Seriola_dumerili
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSSLDG00000002765	si:ch73-14h10.2	100	76.613	Seriola_lalandi_dorsalis
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSSPUG00000009631	LSM2	100	76.613	Sphenodon_punctatus
ENSORLG00015000465	si:ch73-14h10.2	100	76.613	ENSSPAG00000016904	si:ch73-14h10.2	100	76.613	Stegastes_partitus
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSSSCG00000039021	LSM2	100	75.806	Sus_scrofa
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSTRUG00000002093	si:ch73-14h10.2	100	75.610	Takifugu_rubripes
ENSORLG00015000465	si:ch73-14h10.2	77	66.316	ENSTNIG00000013770	si:ch73-14h10.2	99	66.316	Tetraodon_nigroviridis
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSTTRG00000014131	LSM2	100	75.806	Tursiops_truncatus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSUMAG00000013425	LSM2	65	75.610	Ursus_maritimus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSVPAG00000001761	LSM2	100	75.610	Vicugna_pacos
ENSORLG00015000465	si:ch73-14h10.2	84	70.192	ENSVVUG00000016264	-	93	70.192	Vulpes_vulpes
ENSORLG00015000465	si:ch73-14h10.2	100	75.806	ENSXETG00000024077	lsm2	100	75.806	Xenopus_tropicalis
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSXCOG00000006078	si:ch73-14h10.2	100	75.610	Xiphophorus_couchianus
ENSORLG00015000465	si:ch73-14h10.2	99	75.610	ENSXMAG00000028018	si:ch73-14h10.2	100	75.610	Xiphophorus_maculatus